Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042428
CDS Infomation

pacid=37424760 polypeptide=PGSC0003DMP400028780 locus=PGSC0003DMG400016453 ID=PGSC0003DMT400042428.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAAACATATTTTTTTCTTTGCTATTCTCTTTTTTTCAGCTGTCTCTGTTTTT
GCAGAGGAGAATCCTAGCCTTGTAATGGACTATTACAAGGACACTTGCCCTCAAGCTGAA
GAAATCATCAAAGAACAAGTCAAACTTCTCTACAAACGCCACAAGAATACTGCATTTTCT
TGGCTAAGAAACATCTTCCATGACTGCTTTGTTGAGTCATGTGATGCTTCCTTGTTGCTG
GACTCAACAAGGAGGATGCTGTCTGAGAAAGAGACAGACAGGAGTTTTGGTATGAGAAAT
TTCAGATACATTGAGACTATTAAAGAAGCTGTAGAAAGGGAGTGCCCTGGTGTTGTTTCT
TGTGCTGATATTCTTGTTTTGTCTGGTAGAGATGGCATTGTTGCTCTAGGAGGGCCACAC
ATCCCACTCAAAACTGGAAGAAGAGATGGAAGAAAAAGCAGAGCAGACATTCTTGAACAA
CACCTCCCAGATCACAATGAAAGCATGAGTGTTGTTCTTGAGAGATTTGCTAACATTGGA
ATCAACACCCCTGGAGTTGTTGCCTTGCTAGGGTCACACAGTGTGGGTCGAACACACTGT
GTGAAGTTGGTACACCGTTTATATCCAGAAGTAGACCCTCAATTGAACCCAGAGCATGTA
CCACACATGCTCAAGAAGTGTCCAGATCCAATTCCAGACCCAAAGGCTGTGCAGTATGTG
AGAAATGACAGAGGCACACCCATGGTTCTAGACAACAACTACTACAGGAACATATTGGAC
AACAAGGGATTAATGTTAGTTGATCATCAACTAGCAATGGACAAGAGGACTAAGCCTTAT
GTAAAGAAAATGGCAAAAAGCCAAAATTATTTCTTCAAGGAATTTGCAAGAGCCATCACT
ATTCTTTCTGAGAATAATCCACTTACTGGGACAAAAGGTGAGATCAGAAAGCAGTGCAAT
CTCTCCAACAAGCTCCACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028780
PEP Infomation

pacid=37424760 transcript=PGSC0003DMT400042428 locus=PGSC0003DMG400016453 ID=PGSC0003DMT400042428.v4.03 annot-version=v4.03
Sequence

MASKHIFFFAILFFSAVSVFAEENPSLVMDYYKDTCPQAEEIIKEQVKLLYKRHKNTAFS
WLRNIFHDCFVESCDASLLLDSTRRMLSEKETDRSFGMRNFRYIETIKEAVERECPGVVS
CADILVLSGRDGIVALGGPHIPLKTGRRDGRKSRADILEQHLPDHNESMSVVLERFANIG
INTPGVVALLGSHSVGRTHCVKLVHRLYPEVDPQLNPEHVPHMLKKCPDPIPDPKAVQYV
RNDRGTPMVLDNNYYRNILDNKGLMLVDHQLAMDKRTKPYVKKMAKSQNYFFKEFARAIT
ILSENNPLTGTKGEIRKQCNLSNKLH*

Transcript Sequence

Transcript ID

PGSC0003DMT400042428
Transcript Infomation

pacid=37424760 locus=PGSC0003DMG400016453 ID=PGSC0003DMT400042428.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAAACATATTTTTTTCTTTGCTATTCTCTTTTTTTCAGCTGTCTCTGTTTTT
GCAGAGGAGAATCCTAGCCTTGTAATGGACTATTACAAGGACACTTGCCCTCAAGCTGAA
GAAATCATCAAAGAACAAGTCAAACTTCTCTACAAACGCCACAAGAATACTGCATTTTCT
TGGCTAAGAAACATCTTCCATGACTGCTTTGTTGAGTCATGTGATGCTTCCTTGTTGCTG
GACTCAACAAGGAGGATGCTGTCTGAGAAAGAGACAGACAGGAGTTTTGGTATGAGAAAT
TTCAGATACATTGAGACTATTAAAGAAGCTGTAGAAAGGGAGTGCCCTGGTGTTGTTTCT
TGTGCTGATATTCTTGTTTTGTCTGGTAGAGATGGCATTGTTGCTCTAGGAGGGCCACAC
ATCCCACTCAAAACTGGAAGAAGAGATGGAAGAAAAAGCAGAGCAGACATTCTTGAACAA
CACCTCCCAGATCACAATGAAAGCATGAGTGTTGTTCTTGAGAGATTTGCTAACATTGGA
ATCAACACCCCTGGAGTTGTTGCCTTGCTAGGGTCACACAGTGTGGGTCGAACACACTGT
GTGAAGTTGGTACACCGTTTATATCCAGAAGTAGACCCTCAATTGAACCCAGAGCATGTA
CCACACATGCTCAAGAAGTGTCCAGATCCAATTCCAGACCCAAAGGCTGTGCAGTATGTG
AGAAATGACAGAGGCACACCCATGGTTCTAGACAACAACTACTACAGGAACATATTGGAC
AACAAGGGATTAATGTTAGTTGATCATCAACTAGCAATGGACAAGAGGACTAAGCCTTAT
GTAAAGAAAATGGCAAAAAGCCAAAATTATTTCTTCAAGGAATTTGCAAGAGCCATCACT
ATTCTTTCTGAGAATAATCCACTTACTGGGACAAAAGGTGAGATCAGAAAGCAGTGCAAT
CTCTCCAACAAGCTCCACTAA