Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042400
CDS Infomation

pacid=37425497 polypeptide=PGSC0003DMP400028763 locus=PGSC0003DMG400016441 ID=PGSC0003DMT400042400.v4.03 annot-version=v4.03
Sequence

ATGGACAAAGGATGGGGTCTTACCCTTGAAACTTCTTCTTCTAATTCTGATAGAGCTGGT
TTCTTCAAGAACAAGCCTGTTTTTGGTTTTAATTTAAGTCCTAAATATAACGCTGGTGAA
ATGTTTTCCTCCTCCGATGAGAAACGTAGCATCGTTAATGAAGTCGACTTCTTCTCCGAT
AAAAAGCCTATTGTAAAGAAGGAAAATTCTCAAGGCGATAATTCTATCAGAACTGATGAT
CAGTTTGTTGTAAATACTGGTTTGCAACTTGTGACTGCAAACGCGGGGAGTGATCAGTCA
ACCGTAGATGATGGGGTTTCATCGGAAGTACTTGAGGATAAACGAGCTAAAATTCAGCAG
TTGGCACAATTGCAAGTTGAGCTTGAACGGATGAATTCCGAGAATCAACGTTTAAAAGGG
ATGCTTACTCAAGTTAACAGCAGTTATTCTGCACTTCAGATGCATCTTGTTACACTCATG
CAACAACAGCAGCAGCAACAACTGAATTCAAAAACTGAAAATACACATCCCCATGAGGTT
GTTGGCGCAAAGTCTGATGAAGAAAAGAAAAAAGAGAATAATGGGACCATAGTTCCAAGA
CAATTCATGGAGCTAGGCCCAAGTGGTTCCAAAGTTGACCCGATGGATGAACCATCTCAT
TCTCACTCTTCATCAGAAGAAAGAACACTGTCTGGATCACCTCGGAACAACATGGAATTA
GTGTCAAGGGATAAGGCAATTAACCGCGAAGAAAGCCCAGAATCTGAGAGTTGGGTTCCA
AACAAGGCCCCTAAATTGATGAATTCACCATCAAAACCTGTTGAGCAATCAACAGAAGCA
ACCATGAGGAAAGCTCGTGTCTCCGTTCGTGCCCGATCAGAAGCTCCCATGATTAGTGAT
GGTTGCCAGTGGAGAAAATATGGTCAGAAAATGGCAAAAGGCAATCCATGTCCACGTGCT
TACTATCGCTGCACTATGGCTGTTGGCTGTCCAGTGCGCAAACAGGTGCAAAGGTGTGCG
GACGACAGGACGATCTTAATAACAACATACGAAGGTGCACATAACCACCCACTACCACCA
GCAGCCATGGCTATGGCATCAACAACATCCGCAGCAGCAAACATGTTGCTCTCTGGTTCC
ATGCCAAGTGCTGATGGGCTAATGAACACAAATTTCTTAGCAAGGGCAATGCTTCCATGT
TCATCAAACATGGCAACTATTTCAGCATCAGCTCCATTTCCTACTGTTACATTAGACCTC
ACGGCCCAAAATCCAAACGGAGCATTGTCTAATTACCATCAAAGAATTAACCAAGCAAAT
CCTCATTTCCAATTCCCTTTACCAGCTGGGCTTAATCACCCGAATTTCGCCGCTTCAATG
TCAGCACCACAAATGCCTCACATTTTGGGGCAACCTTTGTATAACCAATCGAAATTTTCG
GGCTTACAAATTTCTCAGGACAACATTCATCATCACCCATCAATTTCTCATGACACGCTC
TCCGCCGCCACGGCTGCCATCACCGCCGATCCTAACTTCACCGCCGCCCTTGCTGCTGCC
ATCTCCTCCATCATCGGTGGTTCTCATCCGAATAACGGCAACAGCCCCATGTCCGGTCCC
TCAAGCAATAATAACAACACTAGTAGTTTCCCAGGGAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028763
PEP Infomation

pacid=37425497 transcript=PGSC0003DMT400042400 locus=PGSC0003DMG400016441 ID=PGSC0003DMT400042400.v4.03 annot-version=v4.03
Sequence

MDKGWGLTLETSSSNSDRAGFFKNKPVFGFNLSPKYNAGEMFSSSDEKRSIVNEVDFFSD
KKPIVKKENSQGDNSIRTDDQFVVNTGLQLVTANAGSDQSTVDDGVSSEVLEDKRAKIQQ
LAQLQVELERMNSENQRLKGMLTQVNSSYSALQMHLVTLMQQQQQQQLNSKTENTHPHEV
VGAKSDEEKKKENNGTIVPRQFMELGPSGSKVDPMDEPSHSHSSSEERTLSGSPRNNMEL
VSRDKAINREESPESESWVPNKAPKLMNSPSKPVEQSTEATMRKARVSVRARSEAPMISD
GCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCADDRTILITTYEGAHNHPLPP
AAMAMASTTSAAANMLLSGSMPSADGLMNTNFLARAMLPCSSNMATISASAPFPTVTLDL
TAQNPNGALSNYHQRINQANPHFQFPLPAGLNHPNFAASMSAPQMPHILGQPLYNQSKFS
GLQISQDNIHHHPSISHDTLSAATAAITADPNFTAALAAAISSIIGGSHPNNGNSPMSGP
SSNNNNTSSFPGN*

Transcript Sequence

Transcript ID

PGSC0003DMT400042400
Transcript Infomation

pacid=37425497 locus=PGSC0003DMG400016441 ID=PGSC0003DMT400042400.v4.03 annot-version=v4.03
Sequence

ATGGACAAAGGATGGGGTCTTACCCTTGAAACTTCTTCTTCTAATTCTGATAGAGCTGGT
TTCTTCAAGAACAAGCCTGTTTTTGGTTTTAATTTAAGTCCTAAATATAACGCTGGTGAA
ATGTTTTCCTCCTCCGATGAGAAACGTAGCATCGTTAATGAAGTCGACTTCTTCTCCGAT
AAAAAGCCTATTGTAAAGAAGGAAAATTCTCAAGGCGATAATTCTATCAGAACTGATGAT
CAGTTTGTTGTAAATACTGGTTTGCAACTTGTGACTGCAAACGCGGGGAGTGATCAGTCA
ACCGTAGATGATGGGGTTTCATCGGAAGTACTTGAGGATAAACGAGCTAAAATTCAGCAG
TTGGCACAATTGCAAGTTGAGCTTGAACGGATGAATTCCGAGAATCAACGTTTAAAAGGG
ATGCTTACTCAAGTTAACAGCAGTTATTCTGCACTTCAGATGCATCTTGTTACACTCATG
CAACAACAGCAGCAGCAACAACTGAATTCAAAAACTGAAAATACACATCCCCATGAGGTT
GTTGGCGCAAAGTCTGATGAAGAAAAGAAAAAAGAGAATAATGGGACCATAGTTCCAAGA
CAATTCATGGAGCTAGGCCCAAGTGGTTCCAAAGTTGACCCGATGGATGAACCATCTCAT
TCTCACTCTTCATCAGAAGAAAGAACACTGTCTGGATCACCTCGGAACAACATGGAATTA
GTGTCAAGGGATAAGGCAATTAACCGCGAAGAAAGCCCAGAATCTGAGAGTTGGGTTCCA
AACAAGGCCCCTAAATTGATGAATTCACCATCAAAACCTGTTGAGCAATCAACAGAAGCA
ACCATGAGGAAAGCTCGTGTCTCCGTTCGTGCCCGATCAGAAGCTCCCATGATTAGTGAT
GGTTGCCAGTGGAGAAAATATGGTCAGAAAATGGCAAAAGGCAATCCATGTCCACGTGCT
TACTATCGCTGCACTATGGCTGTTGGCTGTCCAGTGCGCAAACAGGTGCAAAGGTGTGCG
GACGACAGGACGATCTTAATAACAACATACGAAGGTGCACATAACCACCCACTACCACCA
GCAGCCATGGCTATGGCATCAACAACATCCGCAGCAGCAAACATGTTGCTCTCTGGTTCC
ATGCCAAGTGCTGATGGGCTAATGAACACAAATTTCTTAGCAAGGGCAATGCTTCCATGT
TCATCAAACATGGCAACTATTTCAGCATCAGCTCCATTTCCTACTGTTACATTAGACCTC
ACGGCCCAAAATCCAAACGGAGCATTGTCTAATTACCATCAAAGAATTAACCAAGCAAAT
CCTCATTTCCAATTCCCTTTACCAGCTGGGCTTAATCACCCGAATTTCGCCGCTTCAATG
TCAGCACCACAAATGCCTCACATTTTGGGGCAACCTTTGTATAACCAATCGAAATTTTCG
GGCTTACAAATTTCTCAGGACAACATTCATCATCACCCATCAATTTCTCATGACACGCTC
TCCGCCGCCACGGCTGCCATCACCGCCGATCCTAACTTCACCGCCGCCCTTGCTGCTGCC
ATCTCCTCCATCATCGGTGGTTCTCATCCGAATAACGGCAACAGCCCCATGTCCGGTCCC
TCAAGCAATAATAACAACACTAGTAGTTTCCCAGGGAACTAA