Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042379
CDS Infomation

pacid=37424481 polypeptide=PGSC0003DMP400028749 locus=PGSC0003DMG400016435 ID=PGSC0003DMT400042379.v4.03 annot-version=v4.03
Sequence

ATGGCAACATTAGTTGCGAAACAAGGGCCATTGAGCAGTCAGAATCAAGACACACCGGGA
ATGAGAAACCAGTCTAGGGTGTTTAGGAAGAGAAAGTTTATCCTAAACCGCGATGAAGAA
GAGCTTGAAAAGGACAATGCAGCAGCATCGGTGCTCAATGTTACAGAATTACCTAATAAG
AAACCAAAGCTTTGTTCTGAGCCTGGCGCCTCCCGTGGCAAAAGAACTGTGTCAGAGCAC
GCAAATGTTGCAATCAGGAAGGAGGATGCACTTTTATCGGGTGGATCGACAGAGAAAGTA
AAAACAGCGGAAAAGCCTAAGAGGAACATGGTTAAATCACATCTGAGAACCAAGACGGTA
GCTAAGGAAAAAATGACTGTAATGGAATCTGAAGGTTCACATAGCAGAATCACATCCAAG
GGGTATCATCGTTCAGCAGAGAAGAAATTAAGTTCTAAAATTTGGGATGAATTGGTGGGT
GATGATGAAGAAGAGGAGAGTGAAGAGGAACAGGAACAGGAACAGGAAGAGGATGAAGAG
TATTTTCCAGGATCCTTAACAAACTTTCAGATGCCACTTAAGGAAACATTGAATAATTTA
AGAAATTCAGAGAAGCTTTTGAGATCTTGCACCAAGGGAAAAATTCTTAGAAGTGGACCT
ATGAGAAATAAAGGGAATGATGAAGAGAAAGATGAGCCTTCCCAGTGCAAGGACAGGCTC
AAACTATCTACCGCCACAAAAAGCGTTCTTCTGAGAGGAAATTCACAGACAAAAAGGATG
CCTGATAAAGTAAATCTAGAACAACCTCCAGGAACTTCAAGAAAGAAGATGACTCATAAA
GGAGATAATACAATGAACAAGGTGGAATTTGGAAGTGAAGAAAAGCAGGGTGTGTGCAAG
AAAAAACCAACTTTACCCAAGGTTGGAAAGAAAATGCCAGGGACTCGTGAAATTCAAGGC
TCAGAGAATAAAAGGCGGGTGCCTGCTATATTAAATGGAGAACAATGTCTAGGAACGTCA
AACAAGAAGAAGATTCCTCAAGGAGAGAGTACAAGTGAAGATGAGTGGAAGGAAAAGCCA
AGTTTGTCCAAGGATGGAAAAAAGAAGCAGGGAATTCATGAAAAAGATGCCGAGAATAAA
AGGATATCTGTACGACGTGCTACTGCATCATTCAAGAGATACGGTAATGATTACTATATT
GGTGAGTGGGAAGACGATACTGATGAGTATGAGGTTTTCCCTCTAAGTGATGGACATCAT
ATACCAAGTAACACAAGAAACCAGGGAAGTGATGTTTCACCTGAGTCGAAACCAAAAAAT
AGTCTGAAAAATATAATAAAAAATTCAGGGAAGTTACCTGTTTGTAGTTCATTTCCTTCC
TGGGCACCTGCTAAATTAAATGGAGAACAATGTCTAGGAACGTCAAGCAAGAAGAAGAGT
CCTCGAGAAGATAGTACAATGGATAAAATGGATGAAAATGATGATGACTGGAATATGTGC
AAGGAAAAGTCAAATTTGTCCAAGGATGGAAAAAAGAAGCAGAGAATTTATGAGAAAAAT
GCAGAGAATAAAAGGACATCAGTAAGACGTGCTGCTGCATCAGTCAAGAGATATGATCAT
GATTACCATGTTGATGAGTGGGAAGATGATACTGAGGAGTATGAGGTTTGGCATCATACA
CCAAGTAACACAAGAAGTCAGAGAAGTGAAGTTTCACATGAATCAAAACCTAAAGATAGT
CTGAGAGATATAATAAATAATTCAGTGACGTTATCTGCTTGTAGTTCATTGCCTTCCTCC
TCATCGTCTTCTGGTTCGACAATTTCGAGAAATGGAATAGATAGATCTAAAAACGTGAAG
GTAAATTGTCATCAATGTAGAAGAAGTGATAGAAGAACTGTTGTTCCTTGCACTAAGTGT
AAAGAGAAATTTTACTGTATCAAGTGCATCAGGGAATGGTATCCGGAATTGGAAGAAGAG
GAAATCTCAGAGGCTTGCCCATATTGTCGTGGAAAATGTAACTGCAACTGGTGCTTACAC
TCAAGTGGCATGCTTAAGACATCAAGAAGGGATCTCACTGATCGTGAAAAGATCAAGCAT
TTGCAGTATTTGATTATCAAGCTCCTTCCCTTTCTGAAAGAAATTCATCAGGAACAAATT
CAGGAGATAGAGACAGAGTCTTCTATTCGTGGGGTATCTTCATCTTCAGTTGATATTAAA
CAATCACTTTGTCACAATGAGGAGCGCGTTTACTGTAACAACTGTTCAACTTCAATAGTC
GATCTTCATCGAAGCTGCCCAGATTGCTCATTTGAGCTATGTATAAGTTGCTGCCAAGAG
CTTCGGGAAGGAAAGTTTCCAGGAAATAGTAAAAAAGCAGTTGTCCAATATCCAAATGTA
GGTTATGATTACATGCACGGTGGAGATGCACAGCCTGAAAGTTCTGATGATATGGAAATT
CCACAGGACCAGAACAAACCAATTGCTTGGGTTGCTAATTATGATGGTAATATCATGTGT
GCTCCTGTAGCAATTGGTGGATGTGGAAATTTTGTATTAGAGCTCAAGCATCTGCTACCG
AAAAACTGGATATCAACCTTGGAGGCAAAAGCAGAAAGGATTCTGATTCAGTGCAATTTT
TCCGAGATGATTTCCCAGCCGATTTGTAGAATGGATGACCCTGAACTGTTACACAGAGCG
GCTTCAAGAGTTGGTTCTGATGATAACTACTTATATTTCCCTACTGCAAAGGATGCAATG
GAGGATGATGCACTTTTACACTTTCGTAGGCACTGGGGCAAGGGTGAACCAGTGATTGTA
CAAAATGTTCTTGCACATACTAGTGGTTTAAGCTGGGAACCAATGGTTATGTGGCGTGCA
TTATGTGAGGGCACTGATTCAAAGATCCTTACAAGTATGTCAGAAGTGAAAGCTATCGAC
TGTCTGGCTGATTGTCAGGTTCCGATCAATACTCGAAAGTTTTTTAAAGGTTATACAGAA
GGCAGAAGGTATGAAAATCTTTGGCCTGAAATGCTCAAACTTAAAGATTGGCCACCATCT
GACAAGTTTGAGAATCTCTTGCCTCGGCACTGCGATGAATTCATCAGTGCATTACCATTC
CAAGAGTACACAGATCCAAGGATAGGGATTCTGAATCTTGCTGTTAAATTACCGGCTGGA
GTCATAAAACCAGATTTGGGTCCAAAGACATACATCGCGTATGGTGTCACCAAGGAACTT
GGGAGAGGGGATTCAGTGACAAAGCTTCACTGTGATATGTCAGATGCGATAAATATTTTG
ACACACACAGCAGAGATGGCTATAACTGATGAGCAGCAGTCTGCAATTGAAATAGTGAAA
CAGAGGCATAGAACTCAAGATGAAAGAGAGCGCCTCAAATGTGAGGCTGATGAATATCCT
ATGAAGATGTCTAGTGATATTAGAGGGGAGGAGAAAACCTCTGATGATTCAGAGACAACT
GGAGGTGCCTTGTGGGACATTTTCAGAAGGGAAGACGTACCCAAGTTGAATGAGTATCTT
TTAAAGCATGCAAAGGAATTTAGGCACACTTTCTGTTGTCCGGTTGATCAGGTTTTTCAT
CCAATCCATGACCAGAGCTTCTACCTAACTATGGAGCACAAGAGAAAACTGAAGGAAGAA
TTCGGGATTGAACCTTGGACATTCGAGCAAAGACTTGGAGAGGCAGTTTTCATTCCTGCA
GGATGCCCTCACCAAGTGCGTAATCTCAAGTCGTGTACCAAAGTTGCTGCTGATTTTGTT
TCTCCTGAAAACATTCGAGAATGTTTCCGCCTCACAGCTGAGTTCAGGACATTGCCGAAA
GGCCACAAGGCCAGAGAAGACAAACTAGAGATAAAGAAGATGGTCATTCATGCAATCAAC
CAAGTTGTCACAGATTTGGAGCAGCTCACATACATAGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028749
PEP Infomation

pacid=37424481 transcript=PGSC0003DMT400042379 locus=PGSC0003DMG400016435 ID=PGSC0003DMT400042379.v4.03 annot-version=v4.03
Sequence

MATLVAKQGPLSSQNQDTPGMRNQSRVFRKRKFILNRDEEELEKDNAAASVLNVTELPNK
KPKLCSEPGASRGKRTVSEHANVAIRKEDALLSGGSTEKVKTAEKPKRNMVKSHLRTKTV
AKEKMTVMESEGSHSRITSKGYHRSAEKKLSSKIWDELVGDDEEEESEEEQEQEQEEDEE
YFPGSLTNFQMPLKETLNNLRNSEKLLRSCTKGKILRSGPMRNKGNDEEKDEPSQCKDRL
KLSTATKSVLLRGNSQTKRMPDKVNLEQPPGTSRKKMTHKGDNTMNKVEFGSEEKQGVCK
KKPTLPKVGKKMPGTREIQGSENKRRVPAILNGEQCLGTSNKKKIPQGESTSEDEWKEKP
SLSKDGKKKQGIHEKDAENKRISVRRATASFKRYGNDYYIGEWEDDTDEYEVFPLSDGHH
IPSNTRNQGSDVSPESKPKNSLKNIIKNSGKLPVCSSFPSWAPAKLNGEQCLGTSSKKKS
PREDSTMDKMDENDDDWNMCKEKSNLSKDGKKKQRIYEKNAENKRTSVRRAAASVKRYDH
DYHVDEWEDDTEEYEVWHHTPSNTRSQRSEVSHESKPKDSLRDIINNSVTLSACSSLPSS
SSSSGSTISRNGIDRSKNVKVNCHQCRRSDRRTVVPCTKCKEKFYCIKCIREWYPELEEE
EISEACPYCRGKCNCNWCLHSSGMLKTSRRDLTDREKIKHLQYLIIKLLPFLKEIHQEQI
QEIETESSIRGVSSSSVDIKQSLCHNEERVYCNNCSTSIVDLHRSCPDCSFELCISCCQE
LREGKFPGNSKKAVVQYPNVGYDYMHGGDAQPESSDDMEIPQDQNKPIAWVANYDGNIMC
APVAIGGCGNFVLELKHLLPKNWISTLEAKAERILIQCNFSEMISQPICRMDDPELLHRA
ASRVGSDDNYLYFPTAKDAMEDDALLHFRRHWGKGEPVIVQNVLAHTSGLSWEPMVMWRA
LCEGTDSKILTSMSEVKAIDCLADCQVPINTRKFFKGYTEGRRYENLWPEMLKLKDWPPS
DKFENLLPRHCDEFISALPFQEYTDPRIGILNLAVKLPAGVIKPDLGPKTYIAYGVTKEL
GRGDSVTKLHCDMSDAINILTHTAEMAITDEQQSAIEIVKQRHRTQDERERLKCEADEYP
MKMSSDIRGEEKTSDDSETTGGALWDIFRREDVPKLNEYLLKHAKEFRHTFCCPVDQVFH
PIHDQSFYLTMEHKRKLKEEFGIEPWTFEQRLGEAVFIPAGCPHQVRNLKSCTKVAADFV
SPENIRECFRLTAEFRTLPKGHKAREDKLEIKKMVIHAINQVVTDLEQLTYIV*

Transcript Sequence

Transcript ID

PGSC0003DMT400042379
Transcript Infomation

pacid=37424481 locus=PGSC0003DMG400016435 ID=PGSC0003DMT400042379.v4.03 annot-version=v4.03
Sequence

ATGGCAACATTAGTTGCGAAACAAGGGCCATTGAGCAGTCAGAATCAAGACACACCGGGA
ATGAGAAACCAGTCTAGGGTGTTTAGGAAGAGAAAGTTTATCCTAAACCGCGATGAAGAA
GAGCTTGAAAAGGACAATGCAGCAGCATCGGTGCTCAATGTTACAGAATTACCTAATAAG
AAACCAAAGCTTTGTTCTGAGCCTGGCGCCTCCCGTGGCAAAAGAACTGTGTCAGAGCAC
GCAAATGTTGCAATCAGGAAGGAGGATGCACTTTTATCGGGTGGATCGACAGAGAAAGTA
AAAACAGCGGAAAAGCCTAAGAGGAACATGGTTAAATCACATCTGAGAACCAAGACGGTA
GCTAAGGAAAAAATGACTGTAATGGAATCTGAAGGTTCACATAGCAGAATCACATCCAAG
GGGTATCATCGTTCAGCAGAGAAGAAATTAAGTTCTAAAATTTGGGATGAATTGGTGGGT
GATGATGAAGAAGAGGAGAGTGAAGAGGAACAGGAACAGGAACAGGAAGAGGATGAAGAG
TATTTTCCAGGATCCTTAACAAACTTTCAGATGCCACTTAAGGAAACATTGAATAATTTA
AGAAATTCAGAGAAGCTTTTGAGATCTTGCACCAAGGGAAAAATTCTTAGAAGTGGACCT
ATGAGAAATAAAGGGAATGATGAAGAGAAAGATGAGCCTTCCCAGTGCAAGGACAGGCTC
AAACTATCTACCGCCACAAAAAGCGTTCTTCTGAGAGGAAATTCACAGACAAAAAGGATG
CCTGATAAAGTAAATCTAGAACAACCTCCAGGAACTTCAAGAAAGAAGATGACTCATAAA
GGAGATAATACAATGAACAAGGTGGAATTTGGAAGTGAAGAAAAGCAGGGTGTGTGCAAG
AAAAAACCAACTTTACCCAAGGTTGGAAAGAAAATGCCAGGGACTCGTGAAATTCAAGGC
TCAGAGAATAAAAGGCGGGTGCCTGCTATATTAAATGGAGAACAATGTCTAGGAACGTCA
AACAAGAAGAAGATTCCTCAAGGAGAGAGTACAAGTGAAGATGAGTGGAAGGAAAAGCCA
AGTTTGTCCAAGGATGGAAAAAAGAAGCAGGGAATTCATGAAAAAGATGCCGAGAATAAA
AGGATATCTGTACGACGTGCTACTGCATCATTCAAGAGATACGGTAATGATTACTATATT
GGTGAGTGGGAAGACGATACTGATGAGTATGAGGTTTTCCCTCTAAGTGATGGACATCAT
ATACCAAGTAACACAAGAAACCAGGGAAGTGATGTTTCACCTGAGTCGAAACCAAAAAAT
AGTCTGAAAAATATAATAAAAAATTCAGGGAAGTTACCTGTTTGTAGTTCATTTCCTTCC
TGGGCACCTGCTAAATTAAATGGAGAACAATGTCTAGGAACGTCAAGCAAGAAGAAGAGT
CCTCGAGAAGATAGTACAATGGATAAAATGGATGAAAATGATGATGACTGGAATATGTGC
AAGGAAAAGTCAAATTTGTCCAAGGATGGAAAAAAGAAGCAGAGAATTTATGAGAAAAAT
GCAGAGAATAAAAGGACATCAGTAAGACGTGCTGCTGCATCAGTCAAGAGATATGATCAT
GATTACCATGTTGATGAGTGGGAAGATGATACTGAGGAGTATGAGGTTTGGCATCATACA
CCAAGTAACACAAGAAGTCAGAGAAGTGAAGTTTCACATGAATCAAAACCTAAAGATAGT
CTGAGAGATATAATAAATAATTCAGTGACGTTATCTGCTTGTAGTTCATTGCCTTCCTCC
TCATCGTCTTCTGGTTCGACAATTTCGAGAAATGGAATAGATAGATCTAAAAACGTGAAG
GTAAATTGTCATCAATGTAGAAGAAGTGATAGAAGAACTGTTGTTCCTTGCACTAAGTGT
AAAGAGAAATTTTACTGTATCAAGTGCATCAGGGAATGGTATCCGGAATTGGAAGAAGAG
GAAATCTCAGAGGCTTGCCCATATTGTCGTGGAAAATGTAACTGCAACTGGTGCTTACAC
TCAAGTGGCATGCTTAAGACATCAAGAAGGGATCTCACTGATCGTGAAAAGATCAAGCAT
TTGCAGTATTTGATTATCAAGCTCCTTCCCTTTCTGAAAGAAATTCATCAGGAACAAATT
CAGGAGATAGAGACAGAGTCTTCTATTCGTGGGGTATCTTCATCTTCAGTTGATATTAAA
CAATCACTTTGTCACAATGAGGAGCGCGTTTACTGTAACAACTGTTCAACTTCAATAGTC
GATCTTCATCGAAGCTGCCCAGATTGCTCATTTGAGCTATGTATAAGTTGCTGCCAAGAG
CTTCGGGAAGGAAAGTTTCCAGGAAATAGTAAAAAAGCAGTTGTCCAATATCCAAATGTA
GGTTATGATTACATGCACGGTGGAGATGCACAGCCTGAAAGTTCTGATGATATGGAAATT
CCACAGGACCAGAACAAACCAATTGCTTGGGTTGCTAATTATGATGGTAATATCATGTGT
GCTCCTGTAGCAATTGGTGGATGTGGAAATTTTGTATTAGAGCTCAAGCATCTGCTACCG
AAAAACTGGATATCAACCTTGGAGGCAAAAGCAGAAAGGATTCTGATTCAGTGCAATTTT
TCCGAGATGATTTCCCAGCCGATTTGTAGAATGGATGACCCTGAACTGTTACACAGAGCG
GCTTCAAGAGTTGGTTCTGATGATAACTACTTATATTTCCCTACTGCAAAGGATGCAATG
GAGGATGATGCACTTTTACACTTTCGTAGGCACTGGGGCAAGGGTGAACCAGTGATTGTA
CAAAATGTTCTTGCACATACTAGTGGTTTAAGCTGGGAACCAATGGTTATGTGGCGTGCA
TTATGTGAGGGCACTGATTCAAAGATCCTTACAAGTATGTCAGAAGTGAAAGCTATCGAC
TGTCTGGCTGATTGTCAGGTTCCGATCAATACTCGAAAGTTTTTTAAAGGTTATACAGAA
GGCAGAAGGTATGAAAATCTTTGGCCTGAAATGCTCAAACTTAAAGATTGGCCACCATCT
GACAAGTTTGAGAATCTCTTGCCTCGGCACTGCGATGAATTCATCAGTGCATTACCATTC
CAAGAGTACACAGATCCAAGGATAGGGATTCTGAATCTTGCTGTTAAATTACCGGCTGGA
GTCATAAAACCAGATTTGGGTCCAAAGACATACATCGCGTATGGTGTCACCAAGGAACTT
GGGAGAGGGGATTCAGTGACAAAGCTTCACTGTGATATGTCAGATGCGATAAATATTTTG
ACACACACAGCAGAGATGGCTATAACTGATGAGCAGCAGTCTGCAATTGAAATAGTGAAA
CAGAGGCATAGAACTCAAGATGAAAGAGAGCGCCTCAAATGTGAGGCTGATGAATATCCT
ATGAAGATGTCTAGTGATATTAGAGGGGAGGAGAAAACCTCTGATGATTCAGAGACAACT
GGAGGTGCCTTGTGGGACATTTTCAGAAGGGAAGACGTACCCAAGTTGAATGAGTATCTT
TTAAAGCATGCAAAGGAATTTAGGCACACTTTCTGTTGTCCGGTTGATCAGGTTTTTCAT
CCAATCCATGACCAGAGCTTCTACCTAACTATGGAGCACAAGAGAAAACTGAAGGAAGAA
TTCGGGATTGAACCTTGGACATTCGAGCAAAGACTTGGAGAGGCAGTTTTCATTCCTGCA
GGATGCCCTCACCAAGTGCGTAATCTCAAGTCGTGTACCAAAGTTGCTGCTGATTTTGTT
TCTCCTGAAAACATTCGAGAATGTTTCCGCCTCACAGCTGAGTTCAGGACATTGCCGAAA
GGCCACAAGGCCAGAGAAGACAAACTAGAGATAAAGAAGATGGTCATTCATGCAATCAAC
CAAGTTGTCACAGATTTGGAGCAGCTCACATACATAGTTTAG