Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042275
CDS Infomation

pacid=37439626 polypeptide=PGSC0003DMP400028676 locus=PGSC0003DMG401016407 ID=PGSC0003DMT400042275.v4.03 annot-version=v4.03
Sequence

ATGAAGACAGAGGGTCAGGGAATAGATATACTGGAGAATACGAGCGATGTACATAATAGA
TTGCCTCGTCCAATGATCCAGTCTATTTTCTCAGGATTCCAGGAAAAGGTCCAAGAGTGT
GTTAAGTCAAATTTCAAAAGATTGAAAATCGCTCATGATAAATCAATCATGAGAGGTAAT
AACAAAGGAGCAACTGTAGTCATAGATGTGGATAAAGAGAAGCAATTACAATCTTGGAAA
GAGAATCCTAGTTGGGTTGATCCCCCGCCATTTGTAAAGGTAAGTGTACCCAAAGGTTCT
CTTTGCAACCTGAATGTGAAAGTTAATATTGGACTGCCCCCAGATACCGTGTTTGACATT
GTAACCGACCCTGAAAATAGAAGAGTCTTCAAGAATATCAAGGAAGTATTATCAAGGAAG
GTGTTGGTTGATGAAGGTTCAAGGCAAGTAGTGGAATTAGACCAAGCCGCAATATGGAGA
TTTCTTTGGTGGTCAGGAACAATATCTGTTCATGTATTAGTCGACCAAAACAGAGAAGAC
TACACGATGAAGTTCAACCAAGTGAAAACTGGATTCATGGAAAGATTTGAAGGTCGTTGG
AAAGTAGAACCCCTGCTTGTTGATGAACATCTTTGCCATCCCTTCAAACCTAAGACGTTA
GCGGATTACATTTCATATACTAAAGGAAAAGGAAGGATTGGATCAACGGTTAGCTTGGAG
CAACTCATTCAACCAGCTATTGTACCTCCTCCTCCGATTTCATGGTATCTTAGAGGAATA
ACCGCCAAGACAACGGAGATGATTATAACAGACTTGGTTGCTGAAGCAGCTAGAATTCGA
GGATCTTCCAGTAACGATGGTTCCCAGGGTTTGAAGGTAAACGAAGAATCCTCCATTGAA
TCTCAAGTAAGCGATATTCGTGATATAAAAGAAAGGTGGGCCTTAAGAAGGAGAACATCA
AGGCATCATCGAAGATCATCTTCGATTGCCAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028676
PEP Infomation

pacid=37439626 transcript=PGSC0003DMT400042275 locus=PGSC0003DMG401016407 ID=PGSC0003DMT400042275.v4.03 annot-version=v4.03
Sequence

MKTEGQGIDILENTSDVHNRLPRPMIQSIFSGFQEKVQECVKSNFKRLKIAHDKSIMRGN
NKGATVVIDVDKEKQLQSWKENPSWVDPPPFVKVSVPKGSLCNLNVKVNIGLPPDTVFDI
VTDPENRRVFKNIKEVLSRKVLVDEGSRQVVELDQAAIWRFLWWSGTISVHVLVDQNRED
YTMKFNQVKTGFMERFEGRWKVEPLLVDEHLCHPFKPKTLADYISYTKGKGRIGSTVSLE
QLIQPAIVPPPPISWYLRGITAKTTEMIITDLVAEAARIRGSSSNDGSQGLKVNEESSIE
SQVSDIRDIKERWALRRRTSRHHRRSSSIAK*

Transcript Sequence

Transcript ID

PGSC0003DMT400042275
Transcript Infomation

pacid=37439626 locus=PGSC0003DMG401016407 ID=PGSC0003DMT400042275.v4.03 annot-version=v4.03
Sequence

ATGAAGACAGAGGGTCAGGGAATAGATATACTGGAGAATACGAGCGATGTACATAATAGA
TTGCCTCGTCCAATGATCCAGTCTATTTTCTCAGGATTCCAGGAAAAGGTCCAAGAGTGT
GTTAAGTCAAATTTCAAAAGATTGAAAATCGCTCATGATAAATCAATCATGAGAGGTAAT
AACAAAGGAGCAACTGTAGTCATAGATGTGGATAAAGAGAAGCAATTACAATCTTGGAAA
GAGAATCCTAGTTGGGTTGATCCCCCGCCATTTGTAAAGGTAAGTGTACCCAAAGGTTCT
CTTTGCAACCTGAATGTGAAAGTTAATATTGGACTGCCCCCAGATACCGTGTTTGACATT
GTAACCGACCCTGAAAATAGAAGAGTCTTCAAGAATATCAAGGAAGTATTATCAAGGAAG
GTGTTGGTTGATGAAGGTTCAAGGCAAGTAGTGGAATTAGACCAAGCCGCAATATGGAGA
TTTCTTTGGTGGTCAGGAACAATATCTGTTCATGTATTAGTCGACCAAAACAGAGAAGAC
TACACGATGAAGTTCAACCAAGTGAAAACTGGATTCATGGAAAGATTTGAAGGTCGTTGG
AAAGTAGAACCCCTGCTTGTTGATGAACATCTTTGCCATCCCTTCAAACCTAAGACGTTA
GCGGATTACATTTCATATACTAAAGGAAAAGGAAGGATTGGATCAACGGTTAGCTTGGAG
CAACTCATTCAACCAGCTATTGTACCTCCTCCTCCGATTTCATGGTATCTTAGAGGAATA
ACCGCCAAGACAACGGAGATGATTATAACAGACTTGGTTGCTGAAGCAGCTAGAATTCGA
GGATCTTCCAGTAACGATGGTTCCCAGGGTTTGAAGGTAAACGAAGAATCCTCCATTGAA
TCTCAAGTAAGCGATATTCGTGATATAAAAGAAAGGTGGGCCTTAAGAAGGAGAACATCA
AGGCATCATCGAAGATCATCTTCGATTGCCAAGTAA