Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042257
CDS Infomation

pacid=37436945 polypeptide=PGSC0003DMP400028659 locus=PGSC0003DMG400016402 ID=PGSC0003DMT400042257.v4.03 annot-version=v4.03
Sequence

ATGGAGTTAGGTGACAACAAGATTCTGAATGTGGGGTTGCTGTTAGTTGCTACCCTTTTG
GTAGCAAAGCTCATATCTGCACTAATTATGCCCAGATCTAAGAAGCGTTTGCCTCCAGTG
ATTAAGGCATGGCCTATTGTTGGTGGGTTGATTCGTTTCCTTAAAGGGCCAGTTGTGATG
CTTAGACAGGAGTATCCAAAGCTTGGGAGTGTGTTTACTCTGAATTTGTTGAACAAGAAC
ATCACATTCTTCATTGGTCCAGAAGTTTCTGCACATTTTTTCAAAGCCCCAGAAACAGAT
CTTAGCCAACAAGAGGTTTATCAGTTCAATGTGCCTACCTTTGGACCTGGTGTGGTTTTT
GATGTTGATTATACAATTAGGCAGGAACAGTTCAGGTTCTTTACTGAAGCTCTTAGAGTT
ACTAAGTTGAAGGGCTATGTAGATCAGATGGTTACAGAAGCTGAGGAGTACTTCTCAAAA
TGGGGTGAGAGTGGTGAAGTAGACCTAAAGTATGAACTGGAGCATCTTATCATATTGACA
GCTAGTAGATGTCTGTTGGGAGAAGAGGTCCGCAATAAACTCTTTGACGACGTGTCTGCT
CTCTTCCATGACCTGGACAATGGGATGCTCCCTATCAGTGTTATCTTTCCCTACCTTCCA
ATTCCAGCCCATCGCCGACGTGACAATGCCCGGAAGAAGCTTGCGGAGATCTTTGCAAAT
ATCATAAATTCTAGAAAACATACAGGCAAGGCAGAGAATGATATGTTACAATGCTTCATT
GACTCGAAGTACAAAGATGGACGGCCAACAACAGAGGGTGAGATCACAGGTCTTCTGATT
GCTGCTCTTTTCGCTGGGCAGCACACCAGTTCCATCACTTCCACTTGGACAGGGTCATAC
CTCCTCACCAACAACAAGTACATGTCTGCTGTTGTAGATGAACAGAAGAATCTGATGAAG
AAACACGGGAATAAGGTTGATCACGACATCCTTTCCGAGATGGATGCCCTCTACAGATGC
ATAAAGGAAGCCCTGAGACTCCATCCTCCACTGATAATGCTTCTCCGCAGTTCACATAGT
GATTTCAGTGTTACAACCAGAGAAGGAAAAGAGTATGACATTCCGAAGGGCCATATAGTT
GCAACATCACCTGCTTTTGCAAACAGGCTGCCACATATCTTCAAGAATCCAGAAACTTAT
GACCCTGATAGGTTCGGTCCTGGTAGAGAAGAAGATAAGGCTGCAGGAGCATTCTCATAT
ATTTCTTTTGGTGGAGGCAGGCATGGCTGTCTTGGAGAACCATTTGCTTATCTGCAGATT
AAAGCAATATGGAGTCACTTGCTGAGAAATTTCGAGTTTGAACTGATCTCACCTTTCCCT
GAAATTGACTGGAACGCTATGGTTGTCGGTGTCAAAGGTGAAGTAATGGTGAAGTACAAG
CGCCGAAAGCTCTCTGCTGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400028659
PEP Infomation

pacid=37436945 transcript=PGSC0003DMT400042257 locus=PGSC0003DMG400016402 ID=PGSC0003DMT400042257.v4.03 annot-version=v4.03
Sequence

MELGDNKILNVGLLLVATLLVAKLISALIMPRSKKRLPPVIKAWPIVGGLIRFLKGPVVM
LRQEYPKLGSVFTLNLLNKNITFFIGPEVSAHFFKAPETDLSQQEVYQFNVPTFGPGVVF
DVDYTIRQEQFRFFTEALRVTKLKGYVDQMVTEAEEYFSKWGESGEVDLKYELEHLIILT
ASRCLLGEEVRNKLFDDVSALFHDLDNGMLPISVIFPYLPIPAHRRRDNARKKLAEIFAN
IINSRKHTGKAENDMLQCFIDSKYKDGRPTTEGEITGLLIAALFAGQHTSSITSTWTGSY
LLTNNKYMSAVVDEQKNLMKKHGNKVDHDILSEMDALYRCIKEALRLHPPLIMLLRSSHS
DFSVTTREGKEYDIPKGHIVATSPAFANRLPHIFKNPETYDPDRFGPGREEDKAAGAFSY
ISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFPEIDWNAMVVGVKGEVMVKYK
RRKLSAE*

Transcript Sequence

Transcript ID

PGSC0003DMT400042257
Transcript Infomation

pacid=37436945 locus=PGSC0003DMG400016402 ID=PGSC0003DMT400042257.v4.03 annot-version=v4.03
Sequence

ATGGAGTTAGGTGACAACAAGATTCTGAATGTGGGGTTGCTGTTAGTTGCTACCCTTTTG
GTAGCAAAGCTCATATCTGCACTAATTATGCCCAGATCTAAGAAGCGTTTGCCTCCAGTG
ATTAAGGCATGGCCTATTGTTGGTGGGTTGATTCGTTTCCTTAAAGGGCCAGTTGTGATG
CTTAGACAGGAGTATCCAAAGCTTGGGAGTGTGTTTACTCTGAATTTGTTGAACAAGAAC
ATCACATTCTTCATTGGTCCAGAAGTTTCTGCACATTTTTTCAAAGCCCCAGAAACAGAT
CTTAGCCAACAAGAGGTTTATCAGTTCAATGTGCCTACCTTTGGACCTGGTGTGGTTTTT
GATGTTGATTATACAATTAGGCAGGAACAGTTCAGGTTCTTTACTGAAGCTCTTAGAGTT
ACTAAGTTGAAGGGCTATGTAGATCAGATGGTTACAGAAGCTGAGGAGTACTTCTCAAAA
TGGGGTGAGAGTGGTGAAGTAGACCTAAAGTATGAACTGGAGCATCTTATCATATTGACA
GCTAGTAGATGTCTGTTGGGAGAAGAGGTCCGCAATAAACTCTTTGACGACGTGTCTGCT
CTCTTCCATGACCTGGACAATGGGATGCTCCCTATCAGTGTTATCTTTCCCTACCTTCCA
ATTCCAGCCCATCGCCGACGTGACAATGCCCGGAAGAAGCTTGCGGAGATCTTTGCAAAT
ATCATAAATTCTAGAAAACATACAGGCAAGGCAGAGAATGATATGTTACAATGCTTCATT
GACTCGAAGTACAAAGATGGACGGCCAACAACAGAGGGTGAGATCACAGGTCTTCTGATT
GCTGCTCTTTTCGCTGGGCAGCACACCAGTTCCATCACTTCCACTTGGACAGGGTCATAC
CTCCTCACCAACAACAAGTACATGTCTGCTGTTGTAGATGAACAGAAGAATCTGATGAAG
AAACACGGGAATAAGGTTGATCACGACATCCTTTCCGAGATGGATGCCCTCTACAGATGC
ATAAAGGAAGCCCTGAGACTCCATCCTCCACTGATAATGCTTCTCCGCAGTTCACATAGT
GATTTCAGTGTTACAACCAGAGAAGGAAAAGAGTATGACATTCCGAAGGGCCATATAGTT
GCAACATCACCTGCTTTTGCAAACAGGCTGCCACATATCTTCAAGAATCCAGAAACTTAT
GACCCTGATAGGTTCGGTCCTGGTAGAGAAGAAGATAAGGCTGCAGGAGCATTCTCATAT
ATTTCTTTTGGTGGAGGCAGGCATGGCTGTCTTGGAGAACCATTTGCTTATCTGCAGATT
AAAGCAATATGGAGTCACTTGCTGAGAAATTTCGAGTTTGAACTGATCTCACCTTTCCCT
GAAATTGACTGGAACGCTATGGTTGTCGGTGTCAAAGGTGAAGTAATGGTGAAGTACAAG
CGCCGAAAGCTCTCTGCTGAATAA