Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042253
CDS Infomation

pacid=37435024 polypeptide=PGSC0003DMP400028655 locus=PGSC0003DMG400016400 ID=PGSC0003DMT400042253.v4.03 annot-version=v4.03
Sequence

ATGGCTGGCCCTACGCCGCCGCCGACAGAGGTACCGGCACCGGCACCAGCACCGGCAACG
GCAACGGTTCAATTATCAGCTGAAGAAGAAGCTATTAAGAGTAACACCGATTGCGTTTAT
TTTCTTGCGTCTCCTCTCACATGCAAAAAGGGAAGCGAGTGCGAGTACCGCCATAGTGAC
ATGGCTAGGCTTAATCCAAGGGATTGCTGGTACTGGTTGAATGGAAACTGCTTAAACCCA
AAGTGTGCATTCCGGCACCCTCCTCTTGATGGGTTTTTGGAAGCTCAAGTTCCAACTGCT
ATGGGATTTTCTGCAGCTCATATGGTATCTGTTGCACCTATGTCACAGGTTCCATATGCT
TCTAGTAAACAAGCTGTGCCCTGCATATTTTTCCAGCAAGGGATTTGTCGGAAAGGTGAT
AAGTGTGGATTCATGCATGCACCAAGCTTTGTTTCTAACAACCCTACACAACCTCCAGTG
TCTACTGCATCTAGTGAAACTTCAACTGTTAAGAAGGCATTTGGTGGGGTTGAAAAGTCT
GTGCAAGGCACGAAACTTTCACAAACAAATGCTCTGAAGCCTTGTGAACTACCTAAACCT
GTGAGAAAACTGGGAAATCATCTGACTAAGAAAGATAATACCTTTGATGAGAAGGTGCTG
CCGCCGAATTCTGTCATAAACAGAGAGCATTCCAGGTACAAGCCACCAAGTGCTCCTCCA
ACCAATGGCATTCCTTTCAGTGCCCCCAACAGAAAGCAGCAGCCCATTGGGATCGATGAT
CACAACAGCATGCAATACAAGGATGATGAAATTTCAAGGGAGCCTTCTCCTGGTTTTGAT
GTTCTTGTGGATGATGAGCTCAGAGGTTCAGATTATTATCATGGTGAAGATCATTATGGT
GGAAGAAGGGAGAATGGGGAGAGAAATGAATATGACATGGGTGATTCTGCTGATTATGAT
TCAGTGGCAGATATTGACCGAGATATGTACCGTGATGTGCGTGGATATGACTCGTATGAC
AGGCTCCAGGGTCACTATGCTTGGGAGCAGCATATAGCTTCTTCTGAGAGAATACCAGGG
GGCTCAGCTCATCTTGAAAGCAGACGCTATGGTACAGTAGATAGCCCTGAACATGTTGAG
ATATCAGATCTGAGGCATCGGTTATCGAAGCACAGGAGGGGTAATGGTTTGAAATCTGTT
ATTGGTCATGACTTTTCAAGTGAAAAGCATGTTGAAGGTCGAGCCAACAAGAGCTCTAGG
AGGGATGCACACTATTTACCTTCACATGATAGTTCTCTTAATGGTGGTCGCCTTCGAGGA
AGAATAAAGCTTCCAGTTCGATCATCTTCTCCAGATGATAGGGCTGAATTACGATTGGAT
AGGGCTAGAGACCGTGGCAGATTGTCTTCAGAAAGGCCACAGCCGTACTCTTACCAAGGA
AGGCCTCGAGACAGAATAAAGGGAAGAGTGCAAGAGGATATCAATAGCGATGGCAGAAAC
AACAGAGTTCCTCATATAAGGAGAGATATAATAAATGTCAATAATTCTGACTTCCTGCGT
CCTAAAAGTCTTGCAGAACTTAAAGGTAGGAACACTGCTGAGAGCAATGAGCAACAACCC
CCGAGAAAACGGAAGTTCCAAAAGCTTGATGGTGGGGAGGATCTATCATTTGAAGGACCA
ATGCCTTTAAAAGAAATTTTGAAGAGGAAAAGAGGGGGTGAAGGTAGCATGTCATCTGGT
GGGAGTGAAGACGATCAACATGAAAGAAAACACCAGACGGAGAGGACTTCCATGACTTCA
GGGAATGTGGATTTTCCTTCCTCTGTTACCAAGAATGGGTCTGACCTTCCTATTCAGAAG
GAAGAGTCTAAGCTTGTACCCAAATCAGCGGATCACCAATCTCCTTTGTACCGCAGTGAA
AATGAACTTGAAGCTGAAGAAGAGATGGTTGTGGAAGGAGCAGACGCCCAAGACCACAAA
GGCTATGATCAGAGAGATGGACATGATGATGACTATGAGGCGGTTGAAGGTGAAGATTAC
AACTTCGACGAAGGTGACCCTGATGACGAATTCTTGGATGATGATGACGACGACTTTGCA
AAGAAGTTGGGCCTTGTTCACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028655
PEP Infomation

pacid=37435024 transcript=PGSC0003DMT400042253 locus=PGSC0003DMG400016400 ID=PGSC0003DMT400042253.v4.03 annot-version=v4.03
Sequence

MAGPTPPPTEVPAPAPAPATATVQLSAEEEAIKSNTDCVYFLASPLTCKKGSECEYRHSD
MARLNPRDCWYWLNGNCLNPKCAFRHPPLDGFLEAQVPTAMGFSAAHMVSVAPMSQVPYA
SSKQAVPCIFFQQGICRKGDKCGFMHAPSFVSNNPTQPPVSTASSETSTVKKAFGGVEKS
VQGTKLSQTNALKPCELPKPVRKLGNHLTKKDNTFDEKVLPPNSVINREHSRYKPPSAPP
TNGIPFSAPNRKQQPIGIDDHNSMQYKDDEISREPSPGFDVLVDDELRGSDYYHGEDHYG
GRRENGERNEYDMGDSADYDSVADIDRDMYRDVRGYDSYDRLQGHYAWEQHIASSERIPG
GSAHLESRRYGTVDSPEHVEISDLRHRLSKHRRGNGLKSVIGHDFSSEKHVEGRANKSSR
RDAHYLPSHDSSLNGGRLRGRIKLPVRSSSPDDRAELRLDRARDRGRLSSERPQPYSYQG
RPRDRIKGRVQEDINSDGRNNRVPHIRRDIINVNNSDFLRPKSLAELKGRNTAESNEQQP
PRKRKFQKLDGGEDLSFEGPMPLKEILKRKRGGEGSMSSGGSEDDQHERKHQTERTSMTS
GNVDFPSSVTKNGSDLPIQKEESKLVPKSADHQSPLYRSENELEAEEEMVVEGADAQDHK
GYDQRDGHDDDYEAVEGEDYNFDEGDPDDEFLDDDDDDFAKKLGLVH*

Transcript Sequence

Transcript ID

PGSC0003DMT400042253
Transcript Infomation

pacid=37435024 locus=PGSC0003DMG400016400 ID=PGSC0003DMT400042253.v4.03 annot-version=v4.03
Sequence

ATGGCTGGCCCTACGCCGCCGCCGACAGAGGTACCGGCACCGGCACCAGCACCGGCAACG
GCAACGGTTCAATTATCAGCTGAAGAAGAAGCTATTAAGAGTAACACCGATTGCGTTTAT
TTTCTTGCGTCTCCTCTCACATGCAAAAAGGGAAGCGAGTGCGAGTACCGCCATAGTGAC
ATGGCTAGGCTTAATCCAAGGGATTGCTGGTACTGGTTGAATGGAAACTGCTTAAACCCA
AAGTGTGCATTCCGGCACCCTCCTCTTGATGGGTTTTTGGAAGCTCAAGTTCCAACTGCT
ATGGGATTTTCTGCAGCTCATATGGTATCTGTTGCACCTATGTCACAGGTTCCATATGCT
TCTAGTAAACAAGCTGTGCCCTGCATATTTTTCCAGCAAGGGATTTGTCGGAAAGGTGAT
AAGTGTGGATTCATGCATGCACCAAGCTTTGTTTCTAACAACCCTACACAACCTCCAGTG
TCTACTGCATCTAGTGAAACTTCAACTGTTAAGAAGGCATTTGGTGGGGTTGAAAAGTCT
GTGCAAGGCACGAAACTTTCACAAACAAATGCTCTGAAGCCTTGTGAACTACCTAAACCT
GTGAGAAAACTGGGAAATCATCTGACTAAGAAAGATAATACCTTTGATGAGAAGGTGCTG
CCGCCGAATTCTGTCATAAACAGAGAGCATTCCAGGTACAAGCCACCAAGTGCTCCTCCA
ACCAATGGCATTCCTTTCAGTGCCCCCAACAGAAAGCAGCAGCCCATTGGGATCGATGAT
CACAACAGCATGCAATACAAGGATGATGAAATTTCAAGGGAGCCTTCTCCTGGTTTTGAT
GTTCTTGTGGATGATGAGCTCAGAGGTTCAGATTATTATCATGGTGAAGATCATTATGGT
GGAAGAAGGGAGAATGGGGAGAGAAATGAATATGACATGGGTGATTCTGCTGATTATGAT
TCAGTGGCAGATATTGACCGAGATATGTACCGTGATGTGCGTGGATATGACTCGTATGAC
AGGCTCCAGGGTCACTATGCTTGGGAGCAGCATATAGCTTCTTCTGAGAGAATACCAGGG
GGCTCAGCTCATCTTGAAAGCAGACGCTATGGTACAGTAGATAGCCCTGAACATGTTGAG
ATATCAGATCTGAGGCATCGGTTATCGAAGCACAGGAGGGGTAATGGTTTGAAATCTGTT
ATTGGTCATGACTTTTCAAGTGAAAAGCATGTTGAAGGTCGAGCCAACAAGAGCTCTAGG
AGGGATGCACACTATTTACCTTCACATGATAGTTCTCTTAATGGTGGTCGCCTTCGAGGA
AGAATAAAGCTTCCAGTTCGATCATCTTCTCCAGATGATAGGGCTGAATTACGATTGGAT
AGGGCTAGAGACCGTGGCAGATTGTCTTCAGAAAGGCCACAGCCGTACTCTTACCAAGGA
AGGCCTCGAGACAGAATAAAGGGAAGAGTGCAAGAGGATATCAATAGCGATGGCAGAAAC
AACAGAGTTCCTCATATAAGGAGAGATATAATAAATGTCAATAATTCTGACTTCCTGCGT
CCTAAAAGTCTTGCAGAACTTAAAGGTAGGAACACTGCTGAGAGCAATGAGCAACAACCC
CCGAGAAAACGGAAGTTCCAAAAGCTTGATGGTGGGGAGGATCTATCATTTGAAGGACCA
ATGCCTTTAAAAGAAATTTTGAAGAGGAAAAGAGGGGGTGAAGGTAGCATGTCATCTGGT
GGGAGTGAAGACGATCAACATGAAAGAAAACACCAGACGGAGAGGACTTCCATGACTTCA
GGGAATGTGGATTTTCCTTCCTCTGTTACCAAGAATGGGTCTGACCTTCCTATTCAGAAG
GAAGAGTCTAAGCTTGTACCCAAATCAGCGGATCACCAATCTCCTTTGTACCGCAGTGAA
AATGAACTTGAAGCTGAAGAAGAGATGGTTGTGGAAGGAGCAGACGCCCAAGACCACAAA
GGCTATGATCAGAGAGATGGACATGATGATGACTATGAGGCGGTTGAAGGTGAAGATTAC
AACTTCGACGAAGGTGACCCTGATGACGAATTCTTGGATGATGATGACGACGACTTTGCA
AAGAAGTTGGGCCTTGTTCACTAA