Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042246
CDS Infomation

pacid=37439030 polypeptide=PGSC0003DMP400028648 locus=PGSC0003DMG402016396 ID=PGSC0003DMT400042246.v4.03 annot-version=v4.03
Sequence

ATGGAACCCCATCACAACCCACGACCGTCCACCGCCTTCCACCACCACCACGACGGCGGA
GCCTGCGTCAACTGCGGTGGACCTACCGCGTTCCCATCACCGCCTCCTGATCCTAATCCC
AACTACATCCCCATCCGTGCTCCAGCCGTCAACCTTCCACCAGCCAATAACAGAGAAATC
ATCATGCGAACACCAGTTCCTCAATCACAGAGAGTCGTTCCGTTAACTCCTCCTTACCAT
TTCCAAACTCCGGTGAAGAAAATCCACAACCAAAACGACATCGTTCAGTTTCAATCATCT
CCCACTTGCCAGAACTTCCTCGGGTTCGTGGTTCTACTATCGGAGTCTATTCGTTCACAT
AAACTCTCAGATCCTTGCCATGAGTCGCCTGTAGTGTTAGCCATTGTTTCCGTGCTTGAA
ACCCTAAGTGTCTACGTTGATGAGATCCCTTTAGCACCACTGTCGTCTCGATATGGGAAC
TTGGCGTACCGGACGTGGCATGAACGTATGAGTTGTGATGCTGAGTCATTCTTGCTTCAG
TTTCTGCCTCCGGATCTTCACTCGGCTACTGTTGAGCTTGTTCCTTACTTTACTGATAGC
TTTGGCAATTCCAGCAGAATTGATTATGGTACCGGACATGAGACAAATTTTGCAGCATGG
TTGTATTGTTTAGCAAGATTAGGAGTTGTGAAAGAAGAGGACTATCAAGCTCTGGTGTCA
AGGGTTTTTGTCAACTACTTGGATTTGATGAGGAAGTTGCAAGTAACCTATTGCCTAGAG
CCTGCTGGGTCCCATGGGGTTTGGGGACTAGATGACTACCACTTCTTACCTTTTATATTT
GGGTCGTCTCAGTTGATTGATCACAAGTACATGAAACCAAAATCTATTCATAACAAAGAT
ATCTTGGAGAACTTTGCAAATGAATATCTTTATCTCTCATGTATTGTGTTCATAATGAAG
GTGAAGAAGGGAGTGTTTGCAGAGCACTCGCCCATGTTAGATGACATTAGTGGTGTACCC
AATTGGAACAAGGTAAACAGTGGCTTACTTAAGATGTACAAGATTGAAGTTCTGCAGAAG
GTTCCTATCATGCAGCATTTCCTTTTTGGCTCCATTATCCAATGGCTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400028648
PEP Infomation

pacid=37439030 transcript=PGSC0003DMT400042246 locus=PGSC0003DMG402016396 ID=PGSC0003DMT400042246.v4.03 annot-version=v4.03
Sequence

MEPHHNPRPSTAFHHHHDGGACVNCGGPTAFPSPPPDPNPNYIPIRAPAVNLPPANNREI
IMRTPVPQSQRVVPLTPPYHFQTPVKKIHNQNDIVQFQSSPTCQNFLGFVVLLSESIRSH
KLSDPCHESPVVLAIVSVLETLSVYVDEIPLAPLSSRYGNLAYRTWHERMSCDAESFLLQ
FLPPDLHSATVELVPYFTDSFGNSSRIDYGTGHETNFAAWLYCLARLGVVKEEDYQALVS
RVFVNYLDLMRKLQVTYCLEPAGSHGVWGLDDYHFLPFIFGSSQLIDHKYMKPKSIHNKD
ILENFANEYLYLSCIVFIMKVKKGVFAEHSPMLDDISGVPNWNKVNSGLLKMYKIEVLQK
VPIMQHFLFGSIIQWL*

Transcript Sequence

Transcript ID

PGSC0003DMT400042246
Transcript Infomation

pacid=37439030 locus=PGSC0003DMG402016396 ID=PGSC0003DMT400042246.v4.03 annot-version=v4.03
Sequence

ATGGAACCCCATCACAACCCACGACCGTCCACCGCCTTCCACCACCACCACGACGGCGGA
GCCTGCGTCAACTGCGGTGGACCTACCGCGTTCCCATCACCGCCTCCTGATCCTAATCCC
AACTACATCCCCATCCGTGCTCCAGCCGTCAACCTTCCACCAGCCAATAACAGAGAAATC
ATCATGCGAACACCAGTTCCTCAATCACAGAGAGTCGTTCCGTTAACTCCTCCTTACCAT
TTCCAAACTCCGGTGAAGAAAATCCACAACCAAAACGACATCGTTCAGTTTCAATCATCT
CCCACTTGCCAGAACTTCCTCGGGTTCGTGGTTCTACTATCGGAGTCTATTCGTTCACAT
AAACTCTCAGATCCTTGCCATGAGTCGCCTGTAGTGTTAGCCATTGTTTCCGTGCTTGAA
ACCCTAAGTGTCTACGTTGATGAGATCCCTTTAGCACCACTGTCGTCTCGATATGGGAAC
TTGGCGTACCGGACGTGGCATGAACGTATGAGTTGTGATGCTGAGTCATTCTTGCTTCAG
TTTCTGCCTCCGGATCTTCACTCGGCTACTGTTGAGCTTGTTCCTTACTTTACTGATAGC
TTTGGCAATTCCAGCAGAATTGATTATGGTACCGGACATGAGACAAATTTTGCAGCATGG
TTGTATTGTTTAGCAAGATTAGGAGTTGTGAAAGAAGAGGACTATCAAGCTCTGGTGTCA
AGGGTTTTTGTCAACTACTTGGATTTGATGAGGAAGTTGCAAGTAACCTATTGCCTAGAG
CCTGCTGGGTCCCATGGGGTTTGGGGACTAGATGACTACCACTTCTTACCTTTTATATTT
GGGTCGTCTCAGTTGATTGATCACAAGTACATGAAACCAAAATCTATTCATAACAAAGAT
ATCTTGGAGAACTTTGCAAATGAATATCTTTATCTCTCATGTATTGTGTTCATAATGAAG
GTGAAGAAGGGAGTGTTTGCAGAGCACTCGCCCATGTTAGATGACATTAGTGGTGTACCC
AATTGGAACAAGGTAAACAGTGGCTTACTTAAGATGTACAAGATTGAAGTTCTGCAGAAG
GTTCCTATCATGCAGCATTTCCTTTTTGGCTCCATTATCCAATGGCTATGA