Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042238
CDS Infomation

pacid=37435150 polypeptide=PGSC0003DMP400028641 locus=PGSC0003DMG400016395 ID=PGSC0003DMT400042238.v4.03 annot-version=v4.03
Sequence

ATGGATTCTGCAGCCATGACTAGTGTTTGTGGCAAATCTGCTCTTTGCTCTACTCCCGGT
TTATTTTTGGGGAGAACGAGCGGTATTAGGAGCTCGCAGTGTAGCTTTATAGCTGGAAAT
AGGATAAACTTTCCAAGGCAGACAGCTCAAGCACACAGAGTTCGTACTAATTCTCGCAAG
GGTCATGGTGCTCTTACTGTGACATGTCGCGCCGAGAAAATTCTGGTGGCAAATAGAGGA
GAGATTGCTGTCCGCGTGATCCGAACTGCCCATGAGATGGGAATTCCTTGTGTTGCGGTT
TATTCGACCATTGATAAAGATGCCTTACATGTGAAGCTAGCTGATGAATCTGTTTGCATT
GGAGAAGCACCAAGTAATCAGTCGTATTTAGTGATCCCAAATGTCTTGTCTGCTGCTATC
AGTCGCGGATGTACAATGTTGCATCCTGGATATGGTTTCCTTTCTGAGAATGCAAGTTTT
GTTGAGATGTGCAGAGAACATGGAATCAACTTTATTGGGCCAAATCCAGACAGTATAAGA
GTCATGGGTGACAAAGCCACTGCTAGAGATACAATGAAGAATGCTGGTGTTCCAACTGTA
CCAGGAAGTGACGGACTATTGCAGAGCACTGAAGAAGGTGTAAGGCTCGCTGAGGAGATT
GGTTACCCAGTGATGATTAAGGCAACAGCTGGTGGTGGTGGACGTGGAATGCGTCTTGCT
AAAGAGCCTAGTGAGTTCGTAAAATTATTGCAGCAAGCTAAGAGTGAAGCAGCAGCTGCA
TTTGGAAATGATGGCGTTTATCTGGAGAAGTACATCGTAAATCCTAGGCACATTGAATTT
CAGGTTTTGGCGGACAAGTATGGTAATGTTGTACACTTTGGAGAGCGTGATTGCAGTATT
CAGAGAAGAAACCAGAAGTTGCTGGAGGAAGCACCGTCCCCTGCATTGACATCAGATCTG
AGGAAAGCCATGGGTGATGCAGCTGTTGCAGCAGCAGCATCCATAGGATACATTGGTGTT
GGTACCATAGAGTTCCTATTGGATGAGAGAGGGTCCTTTTACTTCATGGAAATGAACACT
CGTATTCAGGTAGAGCATCCAGTGACAGAAATGATATCCTCTGTTGATCTGATAGAGGAA
CAGATCCGTGTCGCTATGGGAGAAAAGCTCCGATACAAACAGGAGGATATTGTGCTTAGA
GGACACTCAATTGAATGCCGTATAAACGCAGAAGATGCTTTCAAAAACTTCAGACCCGGC
CCAGGGAGAATCACTTCATATTTACCAGCTGGAGGTCCATTTACGCGTATGGATAGCCAT
GTTTATCCTGACTATGTGGTTCCACCTAGCTACGATTCCCTGCTAGGAAAGCTCATTGTA
TGGGCTCCAACACGTGAGAGGGCTATTGAGCGCATGAAAAGAGCACTTAATGACACCATT
ATCACTGGAGTTCCTACCACAATAGAATATCATAAACTCATCCTTGATATCGAGGACTTT
AAGAATGGGAACGTTGATACTGCTTTCATTCCAAAGCATGAGGAAGAATTAGCTCCGCCT
CAGCAAATTGTTCCAGCAGCAACCAAGGAGCTGATCAATGCCAATGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028641
PEP Infomation

pacid=37435150 transcript=PGSC0003DMT400042238 locus=PGSC0003DMG400016395 ID=PGSC0003DMT400042238.v4.03 annot-version=v4.03
Sequence

MDSAAMTSVCGKSALCSTPGLFLGRTSGIRSSQCSFIAGNRINFPRQTAQAHRVRTNSRK
GHGALTVTCRAEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCI
GEAPSNQSYLVIPNVLSAAISRGCTMLHPGYGFLSENASFVEMCREHGINFIGPNPDSIR
VMGDKATARDTMKNAGVPTVPGSDGLLQSTEEGVRLAEEIGYPVMIKATAGGGGRGMRLA
KEPSEFVKLLQQAKSEAAAAFGNDGVYLEKYIVNPRHIEFQVLADKYGNVVHFGERDCSI
QRRNQKLLEEAPSPALTSDLRKAMGDAAVAAAASIGYIGVGTIEFLLDERGSFYFMEMNT
RIQVEHPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVLRGHSIECRINAEDAFKNFRPG
PGRITSYLPAGGPFTRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALNDTI
ITGVPTTIEYHKLILDIEDFKNGNVDTAFIPKHEEELAPPQQIVPAATKELINANA*

Transcript Sequence

Transcript ID

PGSC0003DMT400042238
Transcript Infomation

pacid=37435150 locus=PGSC0003DMG400016395 ID=PGSC0003DMT400042238.v4.03 annot-version=v4.03
Sequence

ATGGATTCTGCAGCCATGACTAGTGTTTGTGGCAAATCTGCTCTTTGCTCTACTCCCGGT
TTATTTTTGGGGAGAACGAGCGGTATTAGGAGCTCGCAGTGTAGCTTTATAGCTGGAAAT
AGGATAAACTTTCCAAGGCAGACAGCTCAAGCACACAGAGTTCGTACTAATTCTCGCAAG
GGTCATGGTGCTCTTACTGTGACATGTCGCGCCGAGAAAATTCTGGTGGCAAATAGAGGA
GAGATTGCTGTCCGCGTGATCCGAACTGCCCATGAGATGGGAATTCCTTGTGTTGCGGTT
TATTCGACCATTGATAAAGATGCCTTACATGTGAAGCTAGCTGATGAATCTGTTTGCATT
GGAGAAGCACCAAGTAATCAGTCGTATTTAGTGATCCCAAATGTCTTGTCTGCTGCTATC
AGTCGCGGATGTACAATGTTGCATCCTGGATATGGTTTCCTTTCTGAGAATGCAAGTTTT
GTTGAGATGTGCAGAGAACATGGAATCAACTTTATTGGGCCAAATCCAGACAGTATAAGA
GTCATGGGTGACAAAGCCACTGCTAGAGATACAATGAAGAATGCTGGTGTTCCAACTGTA
CCAGGAAGTGACGGACTATTGCAGAGCACTGAAGAAGGTGTAAGGCTCGCTGAGGAGATT
GGTTACCCAGTGATGATTAAGGCAACAGCTGGTGGTGGTGGACGTGGAATGCGTCTTGCT
AAAGAGCCTAGTGAGTTCGTAAAATTATTGCAGCAAGCTAAGAGTGAAGCAGCAGCTGCA
TTTGGAAATGATGGCGTTTATCTGGAGAAGTACATCGTAAATCCTAGGCACATTGAATTT
CAGGTTTTGGCGGACAAGTATGGTAATGTTGTACACTTTGGAGAGCGTGATTGCAGTATT
CAGAGAAGAAACCAGAAGTTGCTGGAGGAAGCACCGTCCCCTGCATTGACATCAGATCTG
AGGAAAGCCATGGGTGATGCAGCTGTTGCAGCAGCAGCATCCATAGGATACATTGGTGTT
GGTACCATAGAGTTCCTATTGGATGAGAGAGGGTCCTTTTACTTCATGGAAATGAACACT
CGTATTCAGGTAGAGCATCCAGTGACAGAAATGATATCCTCTGTTGATCTGATAGAGGAA
CAGATCCGTGTCGCTATGGGAGAAAAGCTCCGATACAAACAGGAGGATATTGTGCTTAGA
GGACACTCAATTGAATGCCGTATAAACGCAGAAGATGCTTTCAAAAACTTCAGACCCGGC
CCAGGGAGAATCACTTCATATTTACCAGCTGGAGGTCCATTTACGCGTATGGATAGCCAT
GTTTATCCTGACTATGTGGTTCCACCTAGCTACGATTCCCTGCTAGGAAAGCTCATTGTA
TGGGCTCCAACACGTGAGAGGGCTATTGAGCGCATGAAAAGAGCACTTAATGACACCATT
ATCACTGGAGTTCCTACCACAATAGAATATCATAAACTCATCCTTGATATCGAGGACTTT
AAGAATGGGAACGTTGATACTGCTTTCATTCCAAAGCATGAGGAAGAATTAGCTCCGCCT
CAGCAAATTGTTCCAGCAGCAACCAAGGAGCTGATCAATGCCAATGCTTAA