Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042237
CDS Infomation

pacid=37437794 polypeptide=PGSC0003DMP400028640 locus=PGSC0003DMG400016394 ID=PGSC0003DMT400042237.v4.03 annot-version=v4.03
Sequence

ATGTGGAGAAGACTCTCTTCTCAGCTCCGAGCTCTAACTCCATCCCTATCTCCTCCGAAA
TGCAACCTTTTCGTAACAAGTTCTGTTTCATCTTCGTCTCTGACGTCGGAGATTTTTCGT
CCATCCGTGGCTCTGTATAATCGACATTTTAGCTCTGAATTTGGCAATGCTTCTAAGGAG
AATGAAGTCAAGCATGGAAACTTACTCGAAACTAGATTGAACGTGTCTGTTCACTCTGAG
AATAACAGACATGCTTCACTAACATCGCCTTACAAGGGTTATAGATCATGTTTATCGCAA
TACAATGCCATGGTCCCAAGTTTCCCTAGAAGATTCATTACAACAGGTGCTACTTCAGTT
GACATGGTTTCTGAAGATGCTTCTGCTTTGGCAACTCCACGTATCAAATTTAAGAGGCTT
GATAAAACAGCAAAACATATAATGCAGATTCTTGATAAGGAAGCTGTTGAAGAAGTAAGG
GCACAGAGTGAGATTCCTGATATAAAGCCTGGTTATATTATCCAGCTCAAATTGGAAGTG
CCAGAGAACAAGAGACGTGTTTCAACTATCAAAGGCATAGTGATAGCAAGGCGCAATGCG
GGTTTAAATACTACATTCAGATTAAGAAGACTTGTGGCTGGAGTTGGGGTTGAAAACCTA
TTTCATCTGTACTCTCCCAACCTAAAGGAGATAAAGGTGTTGGACAAGAAAAGAGTGAGG
AGGGCCAAGCTATACTATCTCAGGGACAAAATGAATGCCCTGAAAAAACACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028640
PEP Infomation

pacid=37437794 transcript=PGSC0003DMT400042237 locus=PGSC0003DMG400016394 ID=PGSC0003DMT400042237.v4.03 annot-version=v4.03
Sequence

MWRRLSSQLRALTPSLSPPKCNLFVTSSVSSSSLTSEIFRPSVALYNRHFSSEFGNASKE
NEVKHGNLLETRLNVSVHSENNRHASLTSPYKGYRSCLSQYNAMVPSFPRRFITTGATSV
DMVSEDASALATPRIKFKRLDKTAKHIMQILDKEAVEEVRAQSEIPDIKPGYIIQLKLEV
PENKRRVSTIKGIVIARRNAGLNTTFRLRRLVAGVGVENLFHLYSPNLKEIKVLDKKRVR
RAKLYYLRDKMNALKKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400042237
Transcript Infomation

pacid=37437794 locus=PGSC0003DMG400016394 ID=PGSC0003DMT400042237.v4.03 annot-version=v4.03
Sequence

ATGTGGAGAAGACTCTCTTCTCAGCTCCGAGCTCTAACTCCATCCCTATCTCCTCCGAAA
TGCAACCTTTTCGTAACAAGTTCTGTTTCATCTTCGTCTCTGACGTCGGAGATTTTTCGT
CCATCCGTGGCTCTGTATAATCGACATTTTAGCTCTGAATTTGGCAATGCTTCTAAGGAG
AATGAAGTCAAGCATGGAAACTTACTCGAAACTAGATTGAACGTGTCTGTTCACTCTGAG
AATAACAGACATGCTTCACTAACATCGCCTTACAAGGGTTATAGATCATGTTTATCGCAA
TACAATGCCATGGTCCCAAGTTTCCCTAGAAGATTCATTACAACAGGTGCTACTTCAGTT
GACATGGTTTCTGAAGATGCTTCTGCTTTGGCAACTCCACGTATCAAATTTAAGAGGCTT
GATAAAACAGCAAAACATATAATGCAGATTCTTGATAAGGAAGCTGTTGAAGAAGTAAGG
GCACAGAGTGAGATTCCTGATATAAAGCCTGGTTATATTATCCAGCTCAAATTGGAAGTG
CCAGAGAACAAGAGACGTGTTTCAACTATCAAAGGCATAGTGATAGCAAGGCGCAATGCG
GGTTTAAATACTACATTCAGATTAAGAAGACTTGTGGCTGGAGTTGGGGTTGAAAACCTA
TTTCATCTGTACTCTCCCAACCTAAAGGAGATAAAGGTGTTGGACAAGAAAAGAGTGAGG
AGGGCCAAGCTATACTATCTCAGGGACAAAATGAATGCCCTGAAAAAACACTAA