Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042225
CDS Infomation

pacid=37438030 polypeptide=PGSC0003DMP400028631 locus=PGSC0003DMG400016388 ID=PGSC0003DMT400042225.v4.03 annot-version=v4.03
Sequence

ATGAGGAGTGGTGGTTGCACAGTGCAACAAGCTCTAACATCAGAGGCAGCAAGTATAGTA
AAACAAGCTGTTGTGTTAGCTAAACGTCGCGGCCATGCCCAAGTAACACCTCTCCATGTA
GCAAACACCTTACTTGGTTCTTCTTCTGGCTTGCTTAGAACAGCTTGTCTCCAGTCTCAA
ACTCAAACTCAATCTCATCCCCTCCGTTGTAAAGCCCTTGAGCTTTGTTTCAACGTGGCC
CTCAATCGCCTTCCTACTTCATCATCTTCGTCTAGTAGCCCCATGCTACTAGGTCATCCC
TATCAGAATCAGAATCAGAGTCAGAGTCAACATCCTTCCATTTCTAACGCGCTTGTAGCC
GCCTTCAAGCGTGCTCAAGCTCATCAAAGGAGAGGGTCAATAATAGAGAATCAACAACAA
CAACCTATTTTAGGTGTGAAGATAGATCTTGAACAACTCATTATTTCCATCTTGGATGAT
CCTAGTGTGAGTAGGGTCATGAGAGAAGCTGGCTTTTCAAGTACTCAAGTCAAAACAAAT
GTTGAACTCATGTGTACTAGTACTTCTCAAAATCCTTCTCCTTCAAGTAACTTCAAAGAA
AACAACAACAACCATGTTTTCCTTCAAAGTGATGGATTATTAAAAGCAAGTTGCAACAAA
GTAAGTAGTACTCCTTATTCTTTTCTACATGTTAAAGATGAGGATGTGATGAGTGTAGTG
GAAAGTCTAATGAACAAAAGGAGAAAAAGTATAGTGATAGTTGGTGAATGTATTGGTAAC
TTAGAAGGTGTTATTAAAGGAGTGATGGATAAAGTTGACAATTGTTGTACTATTGATCAA
TCTTTGAAGGAAATTAAACTCATAAGTGTTCCTCTTTCAACTTTTTCTAATATCACAAGA
GAAGAAGTTGACCAAAGAATTGGAGAGTTGACTTGTCTTGTGAAAAGTCTAGTAACCAAA
GGGGTTATTTTATACTTGGGAGACCTTAAGTGGATTATTGATTATAGGGGTAATAATAAT
GATGATAATAATAATTTTGGCTATTATTGTCCTGTGGAACATATAGTCATGGAACTTGGG
AGATTGATTTGTAGTATTATTGGTGAAAATGGAAAAATTTGGCTTGTGGGAATTGCAACA
TTTCAAACTTACATGAGATGTAGAAGTGGTCATAATTCATTGGAATCCATTTGGGGCCTA
CATCCTATTACTGTTCCTACTGGAAGTTTGGCCCTCAGTCTCAATTCTGAGAGTGATACA
CAACTTGAACTTAGAAGCAAGGCAAATGAAAATGGATCTTGTGGGATGATTCTTGATAGT
GTGGATGATCATGATCATGATCATGAGAGTCAATTGACTTGTTGTGGTGATTGTTCTTCC
AAGTTCAAAGTAGAAGCATTAAGATTACAACAAAACAATGCTTCTAACATTGAATCTTCA
ACATTGACCACATCAAGTTTACCTTCATGGCTTAAAGAGGAGAGGCAAAGACTTAATAGT
AATCATCATCATCAAAATCAGAAGGGTGTGTCAGTTGAACAACTCTGGAAGAAGTGGAAT
TCAATATGCAACTCGTCTCATAAAAAAACCAAGACATTTGAAAGAAGTCTAACCTTTCCT
ACTTCAACATCACCTTCTTCAATATTCAACTCACCATTTCTTGATCAAGAAGAACAAACA
TGGAGAGGGGGAAATGATACTACTACACGCGAACCAAGTTTGAGAATCTACATTCCTGAG
CATAGTGATAGTAACCCTAGGAACGCGTTTTCTTCAAATAATCCAAATTCTACTCCTAAT
TCCACTTCCTCAATTGATCAAATCATGGAGATGGAATACTACATTTCAATGTTTAAGGAG
TTCAATTTTGAAAACTTGAACATTCTTTCCAATGCATTAGAGGAGAAAGTGCCATGGCAA
AAAGAGGCTATCAAAGAAATTTCAAGGACATTATTGGAATGTAGGTCAAGAATGATAAAA
AGATCAAATGGTGAAGCCAAAGAAGAAACTTGGTTATTTTTCCAAGGTCATGATGTTCAA
GCAAAAGAAAAAATTGCTAGGGAATTGGCTAGGGTTGTGTTTGGTTCTTATTCAAGATTC
ACATCAATTGCTTTGAGTAGTTTTTCTTCCATGAAATTGGATTATTACAAAAGATCACGA
GATGAACAAAGTTGTAGCTACATTGAGAGATTTGTACAAGCAGTGTGTTCAAATCCACAT
CGCGTTTTCTTCATGGAGGATGTGGAACAAATGGACTATTGTTCTCAAAGGGGGATCAAG
AAGGCAATTGAAAGAGGGAAAATTACAAATTCAAGTGGTGAAGAGGTGAGTCTAAGTGAT
GCAATTATCATTTTAAGTTGTGATCATGAGAGCTTTATTAGTTCTAGGTCATCAAGAGGT
GTGTCTCCTAATGGTGATGGATTAGACAATGAGGAAATTAAAAGTATTAGTCCTAATTGT
GTTTCTTTGGATTTAAACATCTCTATTGATCATGATGATCATGAAATTAGTGTGGATGAT
ATTAGACTTATTGAAAGTGTTGATAGATGCATTATGTTTAGAATTCAAGAAATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028631
PEP Infomation

pacid=37438030 transcript=PGSC0003DMT400042225 locus=PGSC0003DMG400016388 ID=PGSC0003DMT400042225.v4.03 annot-version=v4.03
Sequence

MRSGGCTVQQALTSEAASIVKQAVVLAKRRGHAQVTPLHVANTLLGSSSGLLRTACLQSQ
TQTQSHPLRCKALELCFNVALNRLPTSSSSSSSPMLLGHPYQNQNQSQSQHPSISNALVA
AFKRAQAHQRRGSIIENQQQQPILGVKIDLEQLIISILDDPSVSRVMREAGFSSTQVKTN
VELMCTSTSQNPSPSSNFKENNNNHVFLQSDGLLKASCNKVSSTPYSFLHVKDEDVMSVV
ESLMNKRRKSIVIVGECIGNLEGVIKGVMDKVDNCCTIDQSLKEIKLISVPLSTFSNITR
EEVDQRIGELTCLVKSLVTKGVILYLGDLKWIIDYRGNNNDDNNNFGYYCPVEHIVMELG
RLICSIIGENGKIWLVGIATFQTYMRCRSGHNSLESIWGLHPITVPTGSLALSLNSESDT
QLELRSKANENGSCGMILDSVDDHDHDHESQLTCCGDCSSKFKVEALRLQQNNASNIESS
TLTTSSLPSWLKEERQRLNSNHHHQNQKGVSVEQLWKKWNSICNSSHKKTKTFERSLTFP
TSTSPSSIFNSPFLDQEEQTWRGGNDTTTREPSLRIYIPEHSDSNPRNAFSSNNPNSTPN
STSSIDQIMEMEYYISMFKEFNFENLNILSNALEEKVPWQKEAIKEISRTLLECRSRMIK
RSNGEAKEETWLFFQGHDVQAKEKIARELARVVFGSYSRFTSIALSSFSSMKLDYYKRSR
DEQSCSYIERFVQAVCSNPHRVFFMEDVEQMDYCSQRGIKKAIERGKITNSSGEEVSLSD
AIIILSCDHESFISSRSSRGVSPNGDGLDNEEIKSISPNCVSLDLNISIDHDDHEISVDD
IRLIESVDRCIMFRIQEM*

Transcript Sequence

Transcript ID

PGSC0003DMT400042225
Transcript Infomation

pacid=37438030 locus=PGSC0003DMG400016388 ID=PGSC0003DMT400042225.v4.03 annot-version=v4.03
Sequence

ATGAGGAGTGGTGGTTGCACAGTGCAACAAGCTCTAACATCAGAGGCAGCAAGTATAGTA
AAACAAGCTGTTGTGTTAGCTAAACGTCGCGGCCATGCCCAAGTAACACCTCTCCATGTA
GCAAACACCTTACTTGGTTCTTCTTCTGGCTTGCTTAGAACAGCTTGTCTCCAGTCTCAA
ACTCAAACTCAATCTCATCCCCTCCGTTGTAAAGCCCTTGAGCTTTGTTTCAACGTGGCC
CTCAATCGCCTTCCTACTTCATCATCTTCGTCTAGTAGCCCCATGCTACTAGGTCATCCC
TATCAGAATCAGAATCAGAGTCAGAGTCAACATCCTTCCATTTCTAACGCGCTTGTAGCC
GCCTTCAAGCGTGCTCAAGCTCATCAAAGGAGAGGGTCAATAATAGAGAATCAACAACAA
CAACCTATTTTAGGTGTGAAGATAGATCTTGAACAACTCATTATTTCCATCTTGGATGAT
CCTAGTGTGAGTAGGGTCATGAGAGAAGCTGGCTTTTCAAGTACTCAAGTCAAAACAAAT
GTTGAACTCATGTGTACTAGTACTTCTCAAAATCCTTCTCCTTCAAGTAACTTCAAAGAA
AACAACAACAACCATGTTTTCCTTCAAAGTGATGGATTATTAAAAGCAAGTTGCAACAAA
GTAAGTAGTACTCCTTATTCTTTTCTACATGTTAAAGATGAGGATGTGATGAGTGTAGTG
GAAAGTCTAATGAACAAAAGGAGAAAAAGTATAGTGATAGTTGGTGAATGTATTGGTAAC
TTAGAAGGTGTTATTAAAGGAGTGATGGATAAAGTTGACAATTGTTGTACTATTGATCAA
TCTTTGAAGGAAATTAAACTCATAAGTGTTCCTCTTTCAACTTTTTCTAATATCACAAGA
GAAGAAGTTGACCAAAGAATTGGAGAGTTGACTTGTCTTGTGAAAAGTCTAGTAACCAAA
GGGGTTATTTTATACTTGGGAGACCTTAAGTGGATTATTGATTATAGGGGTAATAATAAT
GATGATAATAATAATTTTGGCTATTATTGTCCTGTGGAACATATAGTCATGGAACTTGGG
AGATTGATTTGTAGTATTATTGGTGAAAATGGAAAAATTTGGCTTGTGGGAATTGCAACA
TTTCAAACTTACATGAGATGTAGAAGTGGTCATAATTCATTGGAATCCATTTGGGGCCTA
CATCCTATTACTGTTCCTACTGGAAGTTTGGCCCTCAGTCTCAATTCTGAGAGTGATACA
CAACTTGAACTTAGAAGCAAGGCAAATGAAAATGGATCTTGTGGGATGATTCTTGATAGT
GTGGATGATCATGATCATGATCATGAGAGTCAATTGACTTGTTGTGGTGATTGTTCTTCC
AAGTTCAAAGTAGAAGCATTAAGATTACAACAAAACAATGCTTCTAACATTGAATCTTCA
ACATTGACCACATCAAGTTTACCTTCATGGCTTAAAGAGGAGAGGCAAAGACTTAATAGT
AATCATCATCATCAAAATCAGAAGGGTGTGTCAGTTGAACAACTCTGGAAGAAGTGGAAT
TCAATATGCAACTCGTCTCATAAAAAAACCAAGACATTTGAAAGAAGTCTAACCTTTCCT
ACTTCAACATCACCTTCTTCAATATTCAACTCACCATTTCTTGATCAAGAAGAACAAACA
TGGAGAGGGGGAAATGATACTACTACACGCGAACCAAGTTTGAGAATCTACATTCCTGAG
CATAGTGATAGTAACCCTAGGAACGCGTTTTCTTCAAATAATCCAAATTCTACTCCTAAT
TCCACTTCCTCAATTGATCAAATCATGGAGATGGAATACTACATTTCAATGTTTAAGGAG
TTCAATTTTGAAAACTTGAACATTCTTTCCAATGCATTAGAGGAGAAAGTGCCATGGCAA
AAAGAGGCTATCAAAGAAATTTCAAGGACATTATTGGAATGTAGGTCAAGAATGATAAAA
AGATCAAATGGTGAAGCCAAAGAAGAAACTTGGTTATTTTTCCAAGGTCATGATGTTCAA
GCAAAAGAAAAAATTGCTAGGGAATTGGCTAGGGTTGTGTTTGGTTCTTATTCAAGATTC
ACATCAATTGCTTTGAGTAGTTTTTCTTCCATGAAATTGGATTATTACAAAAGATCACGA
GATGAACAAAGTTGTAGCTACATTGAGAGATTTGTACAAGCAGTGTGTTCAAATCCACAT
CGCGTTTTCTTCATGGAGGATGTGGAACAAATGGACTATTGTTCTCAAAGGGGGATCAAG
AAGGCAATTGAAAGAGGGAAAATTACAAATTCAAGTGGTGAAGAGGTGAGTCTAAGTGAT
GCAATTATCATTTTAAGTTGTGATCATGAGAGCTTTATTAGTTCTAGGTCATCAAGAGGT
GTGTCTCCTAATGGTGATGGATTAGACAATGAGGAAATTAAAAGTATTAGTCCTAATTGT
GTTTCTTTGGATTTAAACATCTCTATTGATCATGATGATCATGAAATTAGTGTGGATGAT
ATTAGACTTATTGAAAGTGTTGATAGATGCATTATGTTTAGAATTCAAGAAATGTAA