Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042221
CDS Infomation

pacid=37439542 polypeptide=PGSC0003DMP400028628 locus=PGSC0003DMG400016386 ID=PGSC0003DMT400042221.v4.03 annot-version=v4.03
Sequence

ATGTTGGGAGAACTCATCACCAGCAGTTTAGTATTGGTTCTTGGATATGCATATCCTGCT
TTTGAATGTTATAAGACTATTGAGAAGAACAGAGTTGAAATTGAAGAACTCAGATTTTGG
TGCCAATATTGGATTATTGTGGCACTGTTGAGAATATTTGAGAGCATTGGTGATGTGTTC
ATGACATGGCTACCAATGTACAGTGAGGCAAAATTGGCACTTATAATATACTTATGGTAT
CCAAAAACAAAGGGAACAGGATACATATATGATACATTATTGAAACCATATGTGTCAAGG
CATGAACCAGATATTGACAGGGGATTTCTAGAGTTCAGAACAAGGGCATTTGACTTGGCT
ATTTATTACTGGCAAAATTGCACTGAATTGGGACAAGCAAAGTTCTTTCAATTGCTTGAT
TTTGCTTCTCCATCTAGAAAAGATTCACAGCTTAGCTCTGAGCAAAGAAATGGTACTGAC
CATTCTCGTAGACCGCCACCACCTTTGGCCCCACCCGCACCATCGTCGTCATCATCATCA
TCGTCATTCGGGTTCTTCCGGAGAAGTAAGCCGTCATCCGACAGGAGGCAACCACCACCA
CCATCACCACGATCAGATAGGAGGCAACCACCACAATCTCCGCGGTCTTACTCCTCTCAC
CGGTCCATATTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028628
PEP Infomation

pacid=37439542 transcript=PGSC0003DMT400042221 locus=PGSC0003DMG400016386 ID=PGSC0003DMT400042221.v4.03 annot-version=v4.03
Sequence

MLGELITSSLVLVLGYAYPAFECYKTIEKNRVEIEELRFWCQYWIIVALLRIFESIGDVF
MTWLPMYSEAKLALIIYLWYPKTKGTGYIYDTLLKPYVSRHEPDIDRGFLEFRTRAFDLA
IYYWQNCTELGQAKFFQLLDFASPSRKDSQLSSEQRNGTDHSRRPPPPLAPPAPSSSSSS
SSFGFFRRSKPSSDRRQPPPPSPRSDRRQPPQSPRSYSSHRSIF*

Transcript Sequence

Transcript ID

PGSC0003DMT400042221
Transcript Infomation

pacid=37439542 locus=PGSC0003DMG400016386 ID=PGSC0003DMT400042221.v4.03 annot-version=v4.03
Sequence

ATGTTGGGAGAACTCATCACCAGCAGTTTAGTATTGGTTCTTGGATATGCATATCCTGCT
TTTGAATGTTATAAGACTATTGAGAAGAACAGAGTTGAAATTGAAGAACTCAGATTTTGG
TGCCAATATTGGATTATTGTGGCACTGTTGAGAATATTTGAGAGCATTGGTGATGTGTTC
ATGACATGGCTACCAATGTACAGTGAGGCAAAATTGGCACTTATAATATACTTATGGTAT
CCAAAAACAAAGGGAACAGGATACATATATGATACATTATTGAAACCATATGTGTCAAGG
CATGAACCAGATATTGACAGGGGATTTCTAGAGTTCAGAACAAGGGCATTTGACTTGGCT
ATTTATTACTGGCAAAATTGCACTGAATTGGGACAAGCAAAGTTCTTTCAATTGCTTGAT
TTTGCTTCTCCATCTAGAAAAGATTCACAGCTTAGCTCTGAGCAAAGAAATGGTACTGAC
CATTCTCGTAGACCGCCACCACCTTTGGCCCCACCCGCACCATCGTCGTCATCATCATCA
TCGTCATTCGGGTTCTTCCGGAGAAGTAAGCCGTCATCCGACAGGAGGCAACCACCACCA
CCATCACCACGATCAGATAGGAGGCAACCACCACAATCTCCGCGGTCTTACTCCTCTCAC
CGGTCCATATTCTAA