Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042215
CDS Infomation

pacid=37436267 polypeptide=PGSC0003DMP400028622 locus=PGSC0003DMG400016383 ID=PGSC0003DMT400042215.v4.03 annot-version=v4.03
Sequence

ATGTCGTTCTCCGCCATTGTCATCCCACCACCTCCACCGTTCGCCGCCGTGAAAAAACCT
GTTTTCATCCGTTCTGTTTGGGCGAACAATCTGGAGTCTGAGTTTTCGTTGATCCGTAGC
TTGGTCGACCGTTTTCCTTTTGTTTCAATGGATACAGAGTTCCCTGGTGTGATATACCGG
TCGGACATACGTGCTAAGAACCCGATTGAGCTCTACAACAATCTGAAATTGAATGTTGAT
GCTCTTAAGCTGATTCAGGTAGGTATCACTCTGACTGATGGTTACGGTAACCTGCCGGAC
TTTGGCTGTGGTTTTGGTTTCATCTGGGAGTTCAACTTCCGTGATTTTGATGTGTTGCAT
GATGATCATGCACCGGATTCCATTGAGTTGCTCCATGATCACGGGTTGGACTTTAAGAAG
ACGCGTGCTCGTGGTGCTGATACCACCAGGTTTGCTGAATTGATGTTGTCCTCTGGGTTG
CTCTGCAATGATGCTGTTTCTTATGTGACTTTTCACAGTGCTTATGATTTTGGCTACCTG
ATTAAGGTTCTTACGGGCTGTAAGCTGCCAGGTGTGCTGACAGAGTTTCTGAAGTTGCTG
AAGGTCTTTTTTGGTGAAAAGGTTTATGATGTGAAGTATATGATGATGTTTTTCCCGTAC
CTTCATGGAGGATTGGACCGGGTTGCAGAAACTCTCATGCTGAATCGCTTGGTTGGGAAT
AGCCATCAGGCTGGCTCAGATAGCTTGCTGACTTGGCATGTGTTTCAAAAGGTGAAGCAG
GTCTACTTAGAGGACAATGAGGCTCGCACCGAGAAGTTTGGTGGTATTCTCTTTGGGTTA
GAGGTTCTTTCTCCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028622
PEP Infomation

pacid=37436267 transcript=PGSC0003DMT400042215 locus=PGSC0003DMG400016383 ID=PGSC0003DMT400042215.v4.03 annot-version=v4.03
Sequence

MSFSAIVIPPPPPFAAVKKPVFIRSVWANNLESEFSLIRSLVDRFPFVSMDTEFPGVIYR
SDIRAKNPIELYNNLKLNVDALKLIQVGITLTDGYGNLPDFGCGFGFIWEFNFRDFDVLH
DDHAPDSIELLHDHGLDFKKTRARGADTTRFAELMLSSGLLCNDAVSYVTFHSAYDFGYL
IKVLTGCKLPGVLTEFLKLLKVFFGEKVYDVKYMMMFFPYLHGGLDRVAETLMLNRLVGN
SHQAGSDSLLTWHVFQKVKQVYLEDNEARTEKFGGILFGLEVLSP*

Transcript Sequence

Transcript ID

PGSC0003DMT400042215
Transcript Infomation

pacid=37436267 locus=PGSC0003DMG400016383 ID=PGSC0003DMT400042215.v4.03 annot-version=v4.03
Sequence

ATGTCGTTCTCCGCCATTGTCATCCCACCACCTCCACCGTTCGCCGCCGTGAAAAAACCT
GTTTTCATCCGTTCTGTTTGGGCGAACAATCTGGAGTCTGAGTTTTCGTTGATCCGTAGC
TTGGTCGACCGTTTTCCTTTTGTTTCAATGGATACAGAGTTCCCTGGTGTGATATACCGG
TCGGACATACGTGCTAAGAACCCGATTGAGCTCTACAACAATCTGAAATTGAATGTTGAT
GCTCTTAAGCTGATTCAGGTAGGTATCACTCTGACTGATGGTTACGGTAACCTGCCGGAC
TTTGGCTGTGGTTTTGGTTTCATCTGGGAGTTCAACTTCCGTGATTTTGATGTGTTGCAT
GATGATCATGCACCGGATTCCATTGAGTTGCTCCATGATCACGGGTTGGACTTTAAGAAG
ACGCGTGCTCGTGGTGCTGATACCACCAGGTTTGCTGAATTGATGTTGTCCTCTGGGTTG
CTCTGCAATGATGCTGTTTCTTATGTGACTTTTCACAGTGCTTATGATTTTGGCTACCTG
ATTAAGGTTCTTACGGGCTGTAAGCTGCCAGGTGTGCTGACAGAGTTTCTGAAGTTGCTG
AAGGTCTTTTTTGGTGAAAAGGTTTATGATGTGAAGTATATGATGATGTTTTTCCCGTAC
CTTCATGGAGGATTGGACCGGGTTGCAGAAACTCTCATGCTGAATCGCTTGGTTGGGAAT
AGCCATCAGGCTGGCTCAGATAGCTTGCTGACTTGGCATGTGTTTCAAAAGGTGAAGCAG
GTCTACTTAGAGGACAATGAGGCTCGCACCGAGAAGTTTGGTGGTATTCTCTTTGGGTTA
GAGGTTCTTTCTCCCTAG