Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042203
CDS Infomation

pacid=37437303 polypeptide=PGSC0003DMP400028613 locus=PGSC0003DMG400016374 ID=PGSC0003DMT400042203.v4.03 annot-version=v4.03
Sequence

ATGAATCAGAAAACATGGCCGCCGACCAAGTCCAATTCCGACGGCCCTCGTCGTTTCACC
GCTTTCCCTTTCATCAGAAAACAGACCCATCTTCAAAATCGTCCATCGGAAAACCCCTTT
TTCAATCACTCCAAAAAGATCACTCCAACAACTCCTTCATCATCATCCAATTCTAGTTGT
AGTAGTAGTAGTAGTAATCAGTACTGCTACAATCAGGACTTTTCTCAGCTTCCCCACGAT
ATTATCTTTAAAATTGCTGCTACTTTTTCGCTGTCGAATGTACGGGCATCTTCTCTAGTA
TGCAAGTCTTGGTGCGATGCACTTCGACCGCTGAGAGAATCTATGGTTTTTCTCAGATGG
GGTAAGAGATTTAAGCATGGACGAGGTGGGGTTAAGCATAATTTGAGTAAAGCCCTTGAT
TCTTTCCTTAAAGGAGCTGCTCGTGGGTCTACACTAGCTATGGTGGATGCTGGGTTACTT
TATTGGGAGATGGGCAAAAGAGAAGAAGGGATTGGTTTGTACAGAAAAGCTGCTGAACTT
GGTGACCCAGCTGGTCAGTGTAATTTGGGGATTTCTCTCTTGCAAGTGAATCCTCTGGAA
CCCGAGGAAGCTGTTAAATGGCTTTATAAAGCTTCCGTTGCTGGTCATGTTCGTGCTCAG
TACCAGCTTGCACTTACTTTACATAAAGGCCATGGTCTGAAGAGAAATCTCCAGGAAACG
GCAAAGTGGTACTTGAGGGCAGCAGAAGGTGGATATGTCCGTGCTATGTATAACACAGCA
TTATGCTACTCGGTGGGAGAAGGTTTAATGCAGTCTCATGAATTAGCAAAAAAATGGATG
AAGAGAGCAGCTGATCGAGGTCATAGCAAAGCCCAGCTTGAGCATGGGTTGAGTCTGTCT
TCTGATGGGGAGAGGATGCAAGCTATGGTATATCTGGAACTTGCTGCTCGCGCTGGTGAA
GCTGCAGCTCATCCCGTGAAAAATGTTATACTTCAACAGATGTCCACTTTTTCTCGAGAT
CACGCTATGTTTCTTGCCAATAGCTGGCGCACTTTACCTTCATCGCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028613
PEP Infomation

pacid=37437303 transcript=PGSC0003DMT400042203 locus=PGSC0003DMG400016374 ID=PGSC0003DMT400042203.v4.03 annot-version=v4.03
Sequence

MNQKTWPPTKSNSDGPRRFTAFPFIRKQTHLQNRPSENPFFNHSKKITPTTPSSSSNSSC
SSSSSNQYCYNQDFSQLPHDIIFKIAATFSLSNVRASSLVCKSWCDALRPLRESMVFLRW
GKRFKHGRGGVKHNLSKALDSFLKGAARGSTLAMVDAGLLYWEMGKREEGIGLYRKAAEL
GDPAGQCNLGISLLQVNPLEPEEAVKWLYKASVAGHVRAQYQLALTLHKGHGLKRNLQET
AKWYLRAAEGGYVRAMYNTALCYSVGEGLMQSHELAKKWMKRAADRGHSKAQLEHGLSLS
SDGERMQAMVYLELAARAGEAAAHPVKNVILQQMSTFSRDHAMFLANSWRTLPSSH*

Transcript Sequence

Transcript ID

PGSC0003DMT400042203
Transcript Infomation

pacid=37437303 locus=PGSC0003DMG400016374 ID=PGSC0003DMT400042203.v4.03 annot-version=v4.03
Sequence

ATGAATCAGAAAACATGGCCGCCGACCAAGTCCAATTCCGACGGCCCTCGTCGTTTCACC
GCTTTCCCTTTCATCAGAAAACAGACCCATCTTCAAAATCGTCCATCGGAAAACCCCTTT
TTCAATCACTCCAAAAAGATCACTCCAACAACTCCTTCATCATCATCCAATTCTAGTTGT
AGTAGTAGTAGTAGTAATCAGTACTGCTACAATCAGGACTTTTCTCAGCTTCCCCACGAT
ATTATCTTTAAAATTGCTGCTACTTTTTCGCTGTCGAATGTACGGGCATCTTCTCTAGTA
TGCAAGTCTTGGTGCGATGCACTTCGACCGCTGAGAGAATCTATGGTTTTTCTCAGATGG
GGTAAGAGATTTAAGCATGGACGAGGTGGGGTTAAGCATAATTTGAGTAAAGCCCTTGAT
TCTTTCCTTAAAGGAGCTGCTCGTGGGTCTACACTAGCTATGGTGGATGCTGGGTTACTT
TATTGGGAGATGGGCAAAAGAGAAGAAGGGATTGGTTTGTACAGAAAAGCTGCTGAACTT
GGTGACCCAGCTGGTCAGTGTAATTTGGGGATTTCTCTCTTGCAAGTGAATCCTCTGGAA
CCCGAGGAAGCTGTTAAATGGCTTTATAAAGCTTCCGTTGCTGGTCATGTTCGTGCTCAG
TACCAGCTTGCACTTACTTTACATAAAGGCCATGGTCTGAAGAGAAATCTCCAGGAAACG
GCAAAGTGGTACTTGAGGGCAGCAGAAGGTGGATATGTCCGTGCTATGTATAACACAGCA
TTATGCTACTCGGTGGGAGAAGGTTTAATGCAGTCTCATGAATTAGCAAAAAAATGGATG
AAGAGAGCAGCTGATCGAGGTCATAGCAAAGCCCAGCTTGAGCATGGGTTGAGTCTGTCT
TCTGATGGGGAGAGGATGCAAGCTATGGTATATCTGGAACTTGCTGCTCGCGCTGGTGAA
GCTGCAGCTCATCCCGTGAAAAATGTTATACTTCAACAGATGTCCACTTTTTCTCGAGAT
CACGCTATGTTTCTTGCCAATAGCTGGCGCACTTTACCTTCATCGCACTGA