Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042165
CDS Infomation

pacid=37437638 polypeptide=PGSC0003DMP400028583 locus=PGSC0003DMG400016362 ID=PGSC0003DMT400042165.v4.03 annot-version=v4.03
Sequence

ATGGCAGGAGGATTTGCAGCAAGTGGTGGTGGAGGTGGTGATTATGAAGGAAAAGTTACA
GCTTTTGTTATTATGACATGTTTGGTTGCAGCCACTGGTGGTTTACTCTTTGGTTATGAC
ATTGGTATTTCAGGAGGAGTGACATCTATGGATGAATTTTTACTCAAATTTTTCCCAAAT
GTGTATCACAAGGAGAAGAACTTGAAAGAAGGAGGAAGCCAATATTGCAAATTCAATGAT
CATATGTTACAACTCTTCACTTCATCACTCTATTTAGCAGCATTAGTTGCTTCATTTGCA
GCTTCAATAACCACAAAAGCATTTGGACGAAAAATCTCTATGCTTATCGGTGGTCTAATT
TTCCTAATAGGCGCGGTCCTGAATGGTGCAGCCATGAACTTGGGTGTACTCATTCTGGGG
CGCCTATTACTAGGTGTTGGCATTGGCTATGCCAACCAATCTGTCCCCGTTTACCTCTCA
GAAATGGCTCCACCTAAACTTAGAGGAGCGCTCAACGTCTGTTTCCAAATGGCTGTCACA
CTTGGCATACTGATCGCGAATCTTGTCAATTATGGTACCTCTACCATGAAGAAAAATGGT
TGGAGAGTGTCTCTTGTTCTCGCGGCTGTACCTGCTGTTATCATGACAGTAGGAGCTGTT
TTCCTACCAGACACGCCTAATTCATTGATCGATAGAGGGCAAAAAGAGGAGGCAAAGACA
ATGTTGCAAAAGATTCGTGGTACAAGCAATGTAGACAACGAATTTGAGGATCTTATCATA
GCAAGCGACATGTCTAAACAAGTCGAAAGTCCATGGGGTAACATTATGAAACCTAGGTAT
AGACCACAATTGACAGTCGCTGTCCTGGTTCCGTTCTTCCAACAACTCACTGGTATCAAC
GTCATTATGTTCTACGCACCTGTCCTGTTTAAAACACTTGGGTTTGGGGACGGAGCTGCG
TTGATGACAGCTGTCATCACCGGACTTGTCAATGTGTTCGCCACACTTATATCCATATTC
ACTGTTGATAGATTTGGCAGGAGACCCTTGTTCCTTGTTGGTGGTACACTCATGATTATC
TGCCAGATTGCTGTTGGTTCCATCATAGCTAGTGTATTTGGAGTGGATGGTCTAGGAACA
TTCAGCAAAGGACTTGGTAACATTACAGTTGCCATTATTTGTGTATATGTAGCAGCATTT
GCTTGGTCATGGGGACCCTTAGGTTGGCTTGTTCCCAGTGAAGTTTTCCCCATGGAAATT
CGATCAGCAGGGCAATCGATCAACGTCTCAGTAAACATGTTCTTCACCTTCATTATCGGA
CAAATATTCCTTACAATGCTCTGTGAATTGAAATTCGGGCTCTTCTTCTTCTTCGGAGGA
TTCGTGGTGATCATGACATTTTTCATCTTGTTCTTCCTCCCTGAGACTAAAGGTATTCCT
ATCGAAGATGTATCGAGAATTTGGAAGAGTCATTGGTTCTGGAAAAAATACATGCCATCT
GACGAAAATACTCATGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028583
PEP Infomation

pacid=37437638 transcript=PGSC0003DMT400042165 locus=PGSC0003DMG400016362 ID=PGSC0003DMT400042165.v4.03 annot-version=v4.03
Sequence

MAGGFAASGGGGGDYEGKVTAFVIMTCLVAATGGLLFGYDIGISGGVTSMDEFLLKFFPN
VYHKEKNLKEGGSQYCKFNDHMLQLFTSSLYLAALVASFAASITTKAFGRKISMLIGGLI
FLIGAVLNGAAMNLGVLILGRLLLGVGIGYANQSVPVYLSEMAPPKLRGALNVCFQMAVT
LGILIANLVNYGTSTMKKNGWRVSLVLAAVPAVIMTVGAVFLPDTPNSLIDRGQKEEAKT
MLQKIRGTSNVDNEFEDLIIASDMSKQVESPWGNIMKPRYRPQLTVAVLVPFFQQLTGIN
VIMFYAPVLFKTLGFGDGAALMTAVITGLVNVFATLISIFTVDRFGRRPLFLVGGTLMII
CQIAVGSIIASVFGVDGLGTFSKGLGNITVAIICVYVAAFAWSWGPLGWLVPSEVFPMEI
RSAGQSINVSVNMFFTFIIGQIFLTMLCELKFGLFFFFGGFVVIMTFFILFFLPETKGIP
IEDVSRIWKSHWFWKKYMPSDENTHV*

Transcript Sequence

Transcript ID

PGSC0003DMT400042165
Transcript Infomation

pacid=37437638 locus=PGSC0003DMG400016362 ID=PGSC0003DMT400042165.v4.03 annot-version=v4.03
Sequence

ATGGCAGGAGGATTTGCAGCAAGTGGTGGTGGAGGTGGTGATTATGAAGGAAAAGTTACA
GCTTTTGTTATTATGACATGTTTGGTTGCAGCCACTGGTGGTTTACTCTTTGGTTATGAC
ATTGGTATTTCAGGAGGAGTGACATCTATGGATGAATTTTTACTCAAATTTTTCCCAAAT
GTGTATCACAAGGAGAAGAACTTGAAAGAAGGAGGAAGCCAATATTGCAAATTCAATGAT
CATATGTTACAACTCTTCACTTCATCACTCTATTTAGCAGCATTAGTTGCTTCATTTGCA
GCTTCAATAACCACAAAAGCATTTGGACGAAAAATCTCTATGCTTATCGGTGGTCTAATT
TTCCTAATAGGCGCGGTCCTGAATGGTGCAGCCATGAACTTGGGTGTACTCATTCTGGGG
CGCCTATTACTAGGTGTTGGCATTGGCTATGCCAACCAATCTGTCCCCGTTTACCTCTCA
GAAATGGCTCCACCTAAACTTAGAGGAGCGCTCAACGTCTGTTTCCAAATGGCTGTCACA
CTTGGCATACTGATCGCGAATCTTGTCAATTATGGTACCTCTACCATGAAGAAAAATGGT
TGGAGAGTGTCTCTTGTTCTCGCGGCTGTACCTGCTGTTATCATGACAGTAGGAGCTGTT
TTCCTACCAGACACGCCTAATTCATTGATCGATAGAGGGCAAAAAGAGGAGGCAAAGACA
ATGTTGCAAAAGATTCGTGGTACAAGCAATGTAGACAACGAATTTGAGGATCTTATCATA
GCAAGCGACATGTCTAAACAAGTCGAAAGTCCATGGGGTAACATTATGAAACCTAGGTAT
AGACCACAATTGACAGTCGCTGTCCTGGTTCCGTTCTTCCAACAACTCACTGGTATCAAC
GTCATTATGTTCTACGCACCTGTCCTGTTTAAAACACTTGGGTTTGGGGACGGAGCTGCG
TTGATGACAGCTGTCATCACCGGACTTGTCAATGTGTTCGCCACACTTATATCCATATTC
ACTGTTGATAGATTTGGCAGGAGACCCTTGTTCCTTGTTGGTGGTACACTCATGATTATC
TGCCAGATTGCTGTTGGTTCCATCATAGCTAGTGTATTTGGAGTGGATGGTCTAGGAACA
TTCAGCAAAGGACTTGGTAACATTACAGTTGCCATTATTTGTGTATATGTAGCAGCATTT
GCTTGGTCATGGGGACCCTTAGGTTGGCTTGTTCCCAGTGAAGTTTTCCCCATGGAAATT
CGATCAGCAGGGCAATCGATCAACGTCTCAGTAAACATGTTCTTCACCTTCATTATCGGA
CAAATATTCCTTACAATGCTCTGTGAATTGAAATTCGGGCTCTTCTTCTTCTTCGGAGGA
TTCGTGGTGATCATGACATTTTTCATCTTGTTCTTCCTCCCTGAGACTAAAGGTATTCCT
ATCGAAGATGTATCGAGAATTTGGAAGAGTCATTGGTTCTGGAAAAAATACATGCCATCT
GACGAAAATACTCATGTTTAG