Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042133
CDS Infomation

pacid=37454493 polypeptide=PGSC0003DMP400028559 locus=PGSC0003DMG400016337 ID=PGSC0003DMT400042133.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTATCACCGCAAATCATCCAATTTCCGGTAACCCATTAATCTCATTCCGTCCC
AAAAACCCTTTTCTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAAACCCCAAACAC
TCCAATTCCTCATTTTCCATTCCCATTGTCCGCTGCTCAATACGCCGTCGACCGGAATAT
ACTCCGAATCACATTCCCGATCCAAACTACGTCCGCATATTCGACACCACTCTCCGTGAT
GGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAG
TTAGCTAAGCTTGGTGTCGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGAT
CTTGAGGCTGTAAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGACAT
GTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAG
GCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACAT
ATGAATTATAAGCTGAAAATGAGTAGAGTTCAAGTTGTTGAGAAAGCTAGGAGTATGGTG
GCTTATGCAAGGAGTATTGGGTGTGAGGATGTTGAATTTAGCCCTGAAGATGCTGGAAGA
TCTGATCCAGAGTTTCTTTATCATATCCTTGGAGAGGTTATCAAAGCTGGGGCAACAACC
CTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCT
AAAATAAAAGCCAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAAC
GATCTTGGGCTTTCTACTGCCAACACCTTAGCTGGAGCATGTGCAGGTGCAAGACAATTG
GAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAGGTTGTA
ATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACA
CAACATATACTCATGTCAAGCAAGATGGTAGAGGAGTACTCGGGACTTCATGTGCAGCCA
CACAAGGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAGGATGGA
ATGCTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGT
GCTAATAAATCTGGTATTGTCCTCGGGAAACTCAGTGGGCGTCATGCTTTGCAAGCTAAA
ATGCTTGAGCTTGGATACGAAATTGAGGGAAAAGAACTTGATGACCTCTTCTGGCGATTC
AAATCTGTGGCTGAGAAGAAAAAGAAAATTACAGATGATGACCTGATAGCACTGATGTCA
GATGAAGTTTTCCAGCCTCAATTTGTTTGGCAACTTCAAAATGTACAGGTTACTTGTGGA
AGTCTTGGTCTTTCTACAGCAACCGTTAAGCTCATTGATGCTGATGGTCAAGAGCATATT
TCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTC
AAGGTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCT
ATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCTTA
ACTGGAGAGACTGTTCACCGTACATTTAGTGGAACCGGAGCAGATATGGATATTGTTATC
TCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTGTTG
GCGAAAAATAACAAACCCGAAGGCAGTGCAGTGATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400028559
PEP Infomation

pacid=37454493 transcript=PGSC0003DMT400042133 locus=PGSC0003DMG400016337 ID=PGSC0003DMT400042133.v4.03 annot-version=v4.03
Sequence

MASITANHPISGNPLISFRPKNPFLQTQTLFNFKPSNPKHSNSSFSIPIVRCSIRRRPEY
TPNHIPDPNYVRIFDTTLRDGEQSPGATMTTKEKLDVARQLAKLGVDIIEAGFPASSEAD
LEAVKLIAKEVGNGVYEEGHVPVICGLARCNKKDIDKAWEAVKYAKKPRIHTFIATSEIH
MNYKLKMSRVQVVEKARSMVAYARSIGCEDVEFSPEDAGRSDPEFLYHILGEVIKAGATT
LNIPDTVGYTVPEEFGQLIAKIKANTPGVEDVIISTHCQNDLGLSTANTLAGACAGARQL
EVTINGIGERAGNASLEEVVMALKCRGEQVLGGLYTGINTQHILMSSKMVEEYSGLHVQP
HKAIVGANAFAHESGIHQDGMLKHKDTYEIISPEDIGLNRANKSGIVLGKLSGRHALQAK
MLELGYEIEGKELDDLFWRFKSVAEKKKKITDDDLIALMSDEVFQPQFVWQLQNVQVTCG
SLGLSTATVKLIDADGQEHISCSVGTGPVDAAYKAVDLIVKVPVTLLEYSMNAVTQGIDA
IASTRVLIRGENGHTSTHALTGETVHRTFSGTGADMDIVISSVRAYVGALNKMMSFRKLL
AKNNKPEGSAVI*

Transcript Sequence

Transcript ID

PGSC0003DMT400042133
Transcript Infomation

pacid=37454493 locus=PGSC0003DMG400016337 ID=PGSC0003DMT400042133.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTATCACCGCAAATCATCCAATTTCCGGTAACCCATTAATCTCATTCCGTCCC
AAAAACCCTTTTCTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAAACCCCAAACAC
TCCAATTCCTCATTTTCCATTCCCATTGTCCGCTGCTCAATACGCCGTCGACCGGAATAT
ACTCCGAATCACATTCCCGATCCAAACTACGTCCGCATATTCGACACCACTCTCCGTGAT
GGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAG
TTAGCTAAGCTTGGTGTCGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGAT
CTTGAGGCTGTAAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGACAT
GTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAG
GCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACAT
ATGAATTATAAGCTGAAAATGAGTAGAGTTCAAGTTGTTGAGAAAGCTAGGAGTATGGTG
GCTTATGCAAGGAGTATTGGGTGTGAGGATGTTGAATTTAGCCCTGAAGATGCTGGAAGA
TCTGATCCAGAGTTTCTTTATCATATCCTTGGAGAGGTTATCAAAGCTGGGGCAACAACC
CTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCT
AAAATAAAAGCCAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAAC
GATCTTGGGCTTTCTACTGCCAACACCTTAGCTGGAGCATGTGCAGGTGCAAGACAATTG
GAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAGGTTGTA
ATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACA
CAACATATACTCATGTCAAGCAAGATGGTAGAGGAGTACTCGGGACTTCATGTGCAGCCA
CACAAGGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAGGATGGA
ATGCTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGT
GCTAATAAATCTGGTATTGTCCTCGGGAAACTCAGTGGGCGTCATGCTTTGCAAGCTAAA
ATGCTTGAGCTTGGATACGAAATTGAGGGAAAAGAACTTGATGACCTCTTCTGGCGATTC
AAATCTGTGGCTGAGAAGAAAAAGAAAATTACAGATGATGACCTGATAGCACTGATGTCA
GATGAAGTTTTCCAGCCTCAATTTGTTTGGCAACTTCAAAATGTACAGGTTACTTGTGGA
AGTCTTGGTCTTTCTACAGCAACCGTTAAGCTCATTGATGCTGATGGTCAAGAGCATATT
TCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTC
AAGGTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCT
ATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCTTA
ACTGGAGAGACTGTTCACCGTACATTTAGTGGAACCGGAGCAGATATGGATATTGTTATC
TCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTGTTG
GCGAAAAATAACAAACCCGAAGGCAGTGCAGTGATATAG