Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042121
CDS Infomation

pacid=37452587 polypeptide=PGSC0003DMP400028552 locus=PGSC0003DMG401016333 ID=PGSC0003DMT400042121.v4.03 annot-version=v4.03
Sequence

ATGGGGAAAAAAGGCAGTTGGTTTTATGCCCTCAAAAGGGTTTTTACGTGTAACTCCAAG
AAGAAGTCTGCCTATGGATCAGGGAAGAAAACTGCCAAGGAAAAGAAGAAGGGTCGTAGA
ATACTGAGGCATGGAGAGTTCAAATCATTCCTCTTCAGAGAACCAAGCAGTATTGAGAAA
ATACTGGGGGAGGTTGATGATCAGAACCTACTTGTTAGGCCTCCTACTTCTGAACAATCT
GGCATTCCATCTGCATTCCCTGTGACACCAACTTCTCCAAGAATCAATTCACCTAGAGAT
GCATCTCCTCGGACTTCTTATAGGGCTACATCTCCTGGTGCCACTTCTCCAAGGATCGCC
TCTCCGAGGGCCGCTTCTCCAAGGGTCATCTCTTCTAAGGCAGCTTCTCCAAAGGTTAGC
CCTCCCAAGGAAGCTTCTCCAAAGGCTACCTCTCCGAGGGCAGCTTCTCCAAAGGCTACC
TCTCCCAGGGCAGCTTCTCCAAAGGTTACCTCTCCCAGGGAAGCTTCTCCAAAGGCTGCC
TCTGCTAGTGCTCCTTCCCTAAAGGCTCTCTCTCCTAGGGAAGCTTCTCCAAAGGCTACC
TCTGCTAGTGCTCCTTCCCCAAAGGCTACTGCTCCTAGGGAGGCTTCTCCAAGGGTCTCT
TCTCCTAGATCTACTTATCCAGAGCTGAGTAGGAACCATAATGAGATTAGCTATGCTAAC
GGACCAGAACCAACTTTGACGCTCCAGCTTTCAGCAACCAAGATACAGGCAGCCTACAGA
AGTTACATGGCAAGGAGGGGTTTCAAATCTTTGAGTGGTTTAGCAAGACTTCAAGGAGTG
GTCAGAAGCAGAAGTGTAAAGCGGCAGACAGTAAATGCCATGAAACAAATGCAACTTCTA
GGTAGGGTTCAAATGCAAATTCAGTCAAGGAGGAGTCAGATGTTCCAGGCACTCCATAGT
CAAGCTTACATGAATGATAAAGAAGCTGAGAGCACTCTAAGCAAATGGACTCAGCTGACT
GAAGCAGGTAACCATGATGATTGGAATAATAGTATGCTAACTAAAGATGAGGTAGAAGCA
AGGCGGCGGGAAAAAGTGGAGGCAGTCATCAAGAGGGAGAGAGCAATGAGCTATGCATGT
TCTCACCAGTTGTGGAGAAGCAACCCCAAATCAGCTACGGACATCCGAACCAGTGGAATT
CCTTGGTGGTGGAACTGGTTGAACCACCAGCTACTTCCAGGAAATGATTCCGAGAGCCAA
TCTGCTGTAAAAGACGTCCATTCAACACCATCAAGGGCAATTTCGGAACACAAGCCAAGT
CCATGGCGTCTAAGTCAAAACTTCAGACACCTCCATTTGGATTATGACAGTCATGAATCA
GTTACCCCGAGGTCAACTAAGTCTGCAGTTCCATTAAGGGGAAAACTAATACATACTCCC
AGAAGAACATCATCACCAATGAGCAGCTCGAGCGTATCAAAGTATTCAAGACGCCGTGCT
AGTGCTGCTGATTCCCCTTTCAATCATTCCATGAAGGATGACGATAGCCTCATGAGCTGT
CCTCCTTTTTCAGGTCCAAGTTACATGTCACCAACCATCTCAGCCAAAGCTAAATTCAGA
GGAAAAACCATTCTTGAGGAGAGAAACATAGGTACCCCATCTAACAGCTCGAGGAGGAGG
CTGTCGTTTCCTTTGACTCCAAGTAGTACTGGGTCTGTCAAGTGGAACAAAGGGTCTGGA
AAGGATGCTGCTTCTTTAAAGGAACATGAATCTATGGGAGATCATATGAGTGTGCATTCT
ACTGGTTCGACGCCCACTGTAGTTGGGAGGAAACCATTTCAAAGATTTGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028552
PEP Infomation

pacid=37452587 transcript=PGSC0003DMT400042121 locus=PGSC0003DMG401016333 ID=PGSC0003DMT400042121.v4.03 annot-version=v4.03
Sequence

MGKKGSWFYALKRVFTCNSKKKSAYGSGKKTAKEKKKGRRILRHGEFKSFLFREPSSIEK
ILGEVDDQNLLVRPPTSEQSGIPSAFPVTPTSPRINSPRDASPRTSYRATSPGATSPRIA
SPRAASPRVISSKAASPKVSPPKEASPKATSPRAASPKATSPRAASPKVTSPREASPKAA
SASAPSLKALSPREASPKATSASAPSPKATAPREASPRVSSPRSTYPELSRNHNEISYAN
GPEPTLTLQLSATKIQAAYRSYMARRGFKSLSGLARLQGVVRSRSVKRQTVNAMKQMQLL
GRVQMQIQSRRSQMFQALHSQAYMNDKEAESTLSKWTQLTEAGNHDDWNNSMLTKDEVEA
RRREKVEAVIKRERAMSYACSHQLWRSNPKSATDIRTSGIPWWWNWLNHQLLPGNDSESQ
SAVKDVHSTPSRAISEHKPSPWRLSQNFRHLHLDYDSHESVTPRSTKSAVPLRGKLIHTP
RRTSSPMSSSSVSKYSRRRASAADSPFNHSMKDDDSLMSCPPFSGPSYMSPTISAKAKFR
GKTILEERNIGTPSNSSRRRLSFPLTPSSTGSVKWNKGSGKDAASLKEHESMGDHMSVHS
TGSTPTVVGRKPFQRFV*

Transcript Sequence

Transcript ID

PGSC0003DMT400042121
Transcript Infomation

pacid=37452587 locus=PGSC0003DMG401016333 ID=PGSC0003DMT400042121.v4.03 annot-version=v4.03
Sequence

ATGGGGAAAAAAGGCAGTTGGTTTTATGCCCTCAAAAGGGTTTTTACGTGTAACTCCAAG
AAGAAGTCTGCCTATGGATCAGGGAAGAAAACTGCCAAGGAAAAGAAGAAGGGTCGTAGA
ATACTGAGGCATGGAGAGTTCAAATCATTCCTCTTCAGAGAACCAAGCAGTATTGAGAAA
ATACTGGGGGAGGTTGATGATCAGAACCTACTTGTTAGGCCTCCTACTTCTGAACAATCT
GGCATTCCATCTGCATTCCCTGTGACACCAACTTCTCCAAGAATCAATTCACCTAGAGAT
GCATCTCCTCGGACTTCTTATAGGGCTACATCTCCTGGTGCCACTTCTCCAAGGATCGCC
TCTCCGAGGGCCGCTTCTCCAAGGGTCATCTCTTCTAAGGCAGCTTCTCCAAAGGTTAGC
CCTCCCAAGGAAGCTTCTCCAAAGGCTACCTCTCCGAGGGCAGCTTCTCCAAAGGCTACC
TCTCCCAGGGCAGCTTCTCCAAAGGTTACCTCTCCCAGGGAAGCTTCTCCAAAGGCTGCC
TCTGCTAGTGCTCCTTCCCTAAAGGCTCTCTCTCCTAGGGAAGCTTCTCCAAAGGCTACC
TCTGCTAGTGCTCCTTCCCCAAAGGCTACTGCTCCTAGGGAGGCTTCTCCAAGGGTCTCT
TCTCCTAGATCTACTTATCCAGAGCTGAGTAGGAACCATAATGAGATTAGCTATGCTAAC
GGACCAGAACCAACTTTGACGCTCCAGCTTTCAGCAACCAAGATACAGGCAGCCTACAGA
AGTTACATGGCAAGGAGGGGTTTCAAATCTTTGAGTGGTTTAGCAAGACTTCAAGGAGTG
GTCAGAAGCAGAAGTGTAAAGCGGCAGACAGTAAATGCCATGAAACAAATGCAACTTCTA
GGTAGGGTTCAAATGCAAATTCAGTCAAGGAGGAGTCAGATGTTCCAGGCACTCCATAGT
CAAGCTTACATGAATGATAAAGAAGCTGAGAGCACTCTAAGCAAATGGACTCAGCTGACT
GAAGCAGGTAACCATGATGATTGGAATAATAGTATGCTAACTAAAGATGAGGTAGAAGCA
AGGCGGCGGGAAAAAGTGGAGGCAGTCATCAAGAGGGAGAGAGCAATGAGCTATGCATGT
TCTCACCAGTTGTGGAGAAGCAACCCCAAATCAGCTACGGACATCCGAACCAGTGGAATT
CCTTGGTGGTGGAACTGGTTGAACCACCAGCTACTTCCAGGAAATGATTCCGAGAGCCAA
TCTGCTGTAAAAGACGTCCATTCAACACCATCAAGGGCAATTTCGGAACACAAGCCAAGT
CCATGGCGTCTAAGTCAAAACTTCAGACACCTCCATTTGGATTATGACAGTCATGAATCA
GTTACCCCGAGGTCAACTAAGTCTGCAGTTCCATTAAGGGGAAAACTAATACATACTCCC
AGAAGAACATCATCACCAATGAGCAGCTCGAGCGTATCAAAGTATTCAAGACGCCGTGCT
AGTGCTGCTGATTCCCCTTTCAATCATTCCATGAAGGATGACGATAGCCTCATGAGCTGT
CCTCCTTTTTCAGGTCCAAGTTACATGTCACCAACCATCTCAGCCAAAGCTAAATTCAGA
GGAAAAACCATTCTTGAGGAGAGAAACATAGGTACCCCATCTAACAGCTCGAGGAGGAGG
CTGTCGTTTCCTTTGACTCCAAGTAGTACTGGGTCTGTCAAGTGGAACAAAGGGTCTGGA
AAGGATGCTGCTTCTTTAAAGGAACATGAATCTATGGGAGATCATATGAGTGTGCATTCT
ACTGGTTCGACGCCCACTGTAGTTGGGAGGAAACCATTTCAAAGATTTGTGTAA