Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042095
CDS Infomation

pacid=37449843 polypeptide=PGSC0003DMP400028536 locus=PGSC0003DMG400016323 ID=PGSC0003DMT400042095.v4.03 annot-version=v4.03
Sequence

ATGGCTTATAATCAAGAAGAGCAAAATGAAGAAGAGCACAAAAAAATTCAGTATCCTTTA
GACTCAACATGTTATAGAATTCTCGATGAAATTGGTCGAGGTGTTAGTGCTATTGTGTAC
AAAGCCATCTGTATTCCTATGAATTCATCTGTCGTAGCAATAAAAGCTATTGATCTTGAT
CAATCAAGAGCTGATCTCGACAACATTAGACGCGAAGCCAAGACAATGTCCCTTCTTTCT
CATCCAAACATCCTTAAAGCACATTGTTCTTTTACTGTCGATCGTTGTCTTTGGGTTATC
ATGCCTTTTATGTCTGCGGGTTCCCTTCAATCCATTATTTCCTCTGCTTTTCCTGATGGT
TTATCTGAGCCCTGTATCGCGATCGTCCTCAAAGAGACGCTCAGCGCGTTAGCCTACCTT
CACAATCAAGGTCACCTTCACCGCGATATTAAAGCAGGAAACATTCTTATAGATTCTCAT
GGAACTATAAAACTCGCGGATTTTGGAGTTTCTGCATCAATTTTCGAGCCAATTTCAGGC
TATGGGTCGTCCTTTTCTTCCTCATCTTCGTGTTTAATGTTCACCGATGTAGCTGGAACG
CCGTATTGGATGGCACCTGAAGTGATACATTCACATACAGGGTACAGTTTCAAGGCTGAT
ATTTGGTCTTTTGGTATTACTGCTCTTGAATTAGCACATGGAAGGCCTCCCCTGTCTCAT
CTCCCTCCTTCAAAATCCTTGTTCATGAAAATCACAAAACGATTTCGATTTTCTGATTAT
GAGAAAACAAAAAACAGCAAGAATTACAAGAAATTCTCAAAGGGTTTTAAGGATATGGTA
GGATTATGTCTTGATCAAGATCCATTCAGAAGGCCAACAGCAGAGAAACTATTAAAGCAT
CCGTTCTTTAAAAGCTGTAATAAAGGCCCTGACTTTCTTGTTAAGCATGTTTTGCAGGGC
TTGCCAAGTGTGGAACAGAGGTTTAAACAAGTAAAGATTCAGAGACTTTTGTCCTTAAAG
AAATCTGATGGAGACGACGATGACGATCCCGAACATGGAGAAATTTCTAAACAAAGAAGG
ATCAGTGGGTGGAATTTCAACGTGGACGGGTTTGAACTAGATCCAGTACTTTTCCCAACT
GAAAAAGATCAAGAAATTAGTAGCCTAAAGCCAAATTATGTCGATGATGTGGTGAAACAA
GTCGATGTATCAGAATTGTTTTCTGATACATCGACTATAAGTTCACCAGGAGGTTCACGA
CAATCGTCTGAGGTCGAAGGGGTTGCTATGAATTGTAGTGGAGATAGAAGAATTGGAGGT
GAAAGTGTTAGTAGGGAAGTAATGTTGGCTAGCTTATTGTTTTTGAAAAAGAGTTTGGAT
GATCAAAGACAAAATGTAATGAATTTGATAAGCATTTTTCATGGGGAACAATATGTTGTG
GAAGTGAATAAGAAAGACAATTTGATTGAGGTGATTGATAAGTTGAGAAATGAAGTGGAG
AATGAGAAGAAGAAAAATTCTGCTTTGCAGCTCGAGATAGAGTTTCTCAAGTCGCACTAT
TCCAATGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028536
PEP Infomation

pacid=37449843 transcript=PGSC0003DMT400042095 locus=PGSC0003DMG400016323 ID=PGSC0003DMT400042095.v4.03 annot-version=v4.03
Sequence

MAYNQEEQNEEEHKKIQYPLDSTCYRILDEIGRGVSAIVYKAICIPMNSSVVAIKAIDLD
QSRADLDNIRREAKTMSLLSHPNILKAHCSFTVDRCLWVIMPFMSAGSLQSIISSAFPDG
LSEPCIAIVLKETLSALAYLHNQGHLHRDIKAGNILIDSHGTIKLADFGVSASIFEPISG
YGSSFSSSSSCLMFTDVAGTPYWMAPEVIHSHTGYSFKADIWSFGITALELAHGRPPLSH
LPPSKSLFMKITKRFRFSDYEKTKNSKNYKKFSKGFKDMVGLCLDQDPFRRPTAEKLLKH
PFFKSCNKGPDFLVKHVLQGLPSVEQRFKQVKIQRLLSLKKSDGDDDDDPEHGEISKQRR
ISGWNFNVDGFELDPVLFPTEKDQEISSLKPNYVDDVVKQVDVSELFSDTSTISSPGGSR
QSSEVEGVAMNCSGDRRIGGESVSREVMLASLLFLKKSLDDQRQNVMNLISIFHGEQYVV
EVNKKDNLIEVIDKLRNEVENEKKKNSALQLEIEFLKSHYSNE*

Transcript Sequence

Transcript ID

PGSC0003DMT400042095
Transcript Infomation

pacid=37449843 locus=PGSC0003DMG400016323 ID=PGSC0003DMT400042095.v4.03 annot-version=v4.03
Sequence

ATGGCTTATAATCAAGAAGAGCAAAATGAAGAAGAGCACAAAAAAATTCAGTATCCTTTA
GACTCAACATGTTATAGAATTCTCGATGAAATTGGTCGAGGTGTTAGTGCTATTGTGTAC
AAAGCCATCTGTATTCCTATGAATTCATCTGTCGTAGCAATAAAAGCTATTGATCTTGAT
CAATCAAGAGCTGATCTCGACAACATTAGACGCGAAGCCAAGACAATGTCCCTTCTTTCT
CATCCAAACATCCTTAAAGCACATTGTTCTTTTACTGTCGATCGTTGTCTTTGGGTTATC
ATGCCTTTTATGTCTGCGGGTTCCCTTCAATCCATTATTTCCTCTGCTTTTCCTGATGGT
TTATCTGAGCCCTGTATCGCGATCGTCCTCAAAGAGACGCTCAGCGCGTTAGCCTACCTT
CACAATCAAGGTCACCTTCACCGCGATATTAAAGCAGGAAACATTCTTATAGATTCTCAT
GGAACTATAAAACTCGCGGATTTTGGAGTTTCTGCATCAATTTTCGAGCCAATTTCAGGC
TATGGGTCGTCCTTTTCTTCCTCATCTTCGTGTTTAATGTTCACCGATGTAGCTGGAACG
CCGTATTGGATGGCACCTGAAGTGATACATTCACATACAGGGTACAGTTTCAAGGCTGAT
ATTTGGTCTTTTGGTATTACTGCTCTTGAATTAGCACATGGAAGGCCTCCCCTGTCTCAT
CTCCCTCCTTCAAAATCCTTGTTCATGAAAATCACAAAACGATTTCGATTTTCTGATTAT
GAGAAAACAAAAAACAGCAAGAATTACAAGAAATTCTCAAAGGGTTTTAAGGATATGGTA
GGATTATGTCTTGATCAAGATCCATTCAGAAGGCCAACAGCAGAGAAACTATTAAAGCAT
CCGTTCTTTAAAAGCTGTAATAAAGGCCCTGACTTTCTTGTTAAGCATGTTTTGCAGGGC
TTGCCAAGTGTGGAACAGAGGTTTAAACAAGTAAAGATTCAGAGACTTTTGTCCTTAAAG
AAATCTGATGGAGACGACGATGACGATCCCGAACATGGAGAAATTTCTAAACAAAGAAGG
ATCAGTGGGTGGAATTTCAACGTGGACGGGTTTGAACTAGATCCAGTACTTTTCCCAACT
GAAAAAGATCAAGAAATTAGTAGCCTAAAGCCAAATTATGTCGATGATGTGGTGAAACAA
GTCGATGTATCAGAATTGTTTTCTGATACATCGACTATAAGTTCACCAGGAGGTTCACGA
CAATCGTCTGAGGTCGAAGGGGTTGCTATGAATTGTAGTGGAGATAGAAGAATTGGAGGT
GAAAGTGTTAGTAGGGAAGTAATGTTGGCTAGCTTATTGTTTTTGAAAAAGAGTTTGGAT
GATCAAAGACAAAATGTAATGAATTTGATAAGCATTTTTCATGGGGAACAATATGTTGTG
GAAGTGAATAAGAAAGACAATTTGATTGAGGTGATTGATAAGTTGAGAAATGAAGTGGAG
AATGAGAAGAAGAAAAATTCTGCTTTGCAGCTCGAGATAGAGTTTCTCAAGTCGCACTAT
TCCAATGAGTAG