Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042080
CDS Infomation

pacid=37453481 polypeptide=PGSC0003DMP400028521 locus=PGSC0003DMG400016319 ID=PGSC0003DMT400042080.v4.03 annot-version=v4.03
Sequence

ATGCATCATCTTCGTAATTTTAAATCTAAATCTCCCAAATTTGATGATCAGATGATAAAT
CAACTTTCTCCTATTTTCGACACCAGTACTGAATCTGGCCGCGCTGCTGGTAGACTTGAA
AAGTTTTCTCATTACGTTGCAAGGCAATTGGGGTTTAAAGATGAAAGTGAATGTGTTGGG
TTATGTGAGTTAGTACAAGAATACTTGAAGAGATCCAAAGGATGTGATAATAGTATTTTT
GAATACTTTGCAAATGAACAAGATGCTGAATCTTTGTTTGTCAAATTGGAAAATGAATTA
GAGAGATGCATTCTTGCTTATTTTGCTTTTCATTGGAGTAAAGCTTCTATGTTAATTACC
CAGGTATTGAGTGTTGATTCTGAGCAGAAAAGACTCAAGGATTTGGTGTTGGCAGCTACA
AGGAAGCAGAGATTTGAGAAGATAACAAAAGATTTGAAAGTGACTAGGGTATTTTCTACG
CTGGTAGAGGAGATGAAGGCGATTGGAACGGTATCATCTAACGACGGTAATGGTGAGTCC
AGATGTACGGACGTGATGGTGCCGGTGGCTCACAGTCAAAGAAGTCCGGTGCTCCTCCTT
ATGGGTGGTGGAATGGGAGCTGGCAAAAGTACTGTCCTTAAAGACATCCTCAAACAGCCA
TTCTGGTCGGAAGCAGCTGCAAATGCAGTGGTAGTAGAGGCAGATGCTTTCAAGGAGACA
GACGTAATATACAGAGCCCTTAGCTCAAGAGGTCATCATAATGACATGCTTCAAACTGCT
GAATTGGTACATCAAAATTCAACAGATGCAGCATCTTCTCTGCTAGTCACAGCTCTTAAC
GAGGGGCGCGATGTTATAATGGATGGAACCTTATCATGGGAGCCATTTGTTGAGCAGACC
ATAGCCATGGCAAGAAATGTACACAAACATCGATATCGAATGGGGGAAGGTTACAAGGTT
GCAGAGGATGGCACAGTTACTGAAAATTATTGGGAACAAATTGAACAGGAAAAAGGAGAA
GAGTCAGCTAATAAGATCAGTAAACCTTATAGAATAGAATTGGTGGGAGTTGTATGTGAT
CCTTACCTAGCTGTTGTTAGAGGCATCAGGCGAGCTATAGCAACAGGGAGGGCAGTTAGA
GTAAAGCCCCAATTGAAATCTCACAAGAGATTCGCAAATGCATTTCCCAAATACTGTGAA
CTTGTTGATAACGCCAGGCTATACTGCACCAATGCCTTAGGCTCAAAACCACCGTTAATA
GCATGGAAAGATGGAGAGAACAAAATGTTGGTGGAACCAGAGGACATCAAGTGTTTGGAA
ATGGTGAAAAAACTGAAGGAAGAAGCAGAATCAATTTACGAGCTGTACGAGGGAGATGAT
GTATTGTCTCTGCAGACTCCTGGTTCAGTCTGGAAAGACATGGTTTTAATACCTACAAGG
TCTACTCTCCAACAAGAGCTCAAAACTGCAATTCTAAAAATTGAAAACAGGGGAAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400028521
PEP Infomation

pacid=37453481 transcript=PGSC0003DMT400042080 locus=PGSC0003DMG400016319 ID=PGSC0003DMT400042080.v4.03 annot-version=v4.03
Sequence

MHHLRNFKSKSPKFDDQMINQLSPIFDTSTESGRAAGRLEKFSHYVARQLGFKDESECVG
LCELVQEYLKRSKGCDNSIFEYFANEQDAESLFVKLENELERCILAYFAFHWSKASMLIT
QVLSVDSEQKRLKDLVLAATRKQRFEKITKDLKVTRVFSTLVEEMKAIGTVSSNDGNGES
RCTDVMVPVAHSQRSPVLLLMGGGMGAGKSTVLKDILKQPFWSEAAANAVVVEADAFKET
DVIYRALSSRGHHNDMLQTAELVHQNSTDAASSLLVTALNEGRDVIMDGTLSWEPFVEQT
IAMARNVHKHRYRMGEGYKVAEDGTVTENYWEQIEQEKGEESANKISKPYRIELVGVVCD
PYLAVVRGIRRAIATGRAVRVKPQLKSHKRFANAFPKYCELVDNARLYCTNALGSKPPLI
AWKDGENKMLVEPEDIKCLEMVKKLKEEAESIYELYEGDDVLSLQTPGSVWKDMVLIPTR
STLQQELKTAILKIENRGK*

Transcript Sequence

Transcript ID

PGSC0003DMT400042080
Transcript Infomation

pacid=37453481 locus=PGSC0003DMG400016319 ID=PGSC0003DMT400042080.v4.03 annot-version=v4.03
Sequence

ATGCATCATCTTCGTAATTTTAAATCTAAATCTCCCAAATTTGATGATCAGATGATAAAT
CAACTTTCTCCTATTTTCGACACCAGTACTGAATCTGGCCGCGCTGCTGGTAGACTTGAA
AAGTTTTCTCATTACGTTGCAAGGCAATTGGGGTTTAAAGATGAAAGTGAATGTGTTGGG
TTATGTGAGTTAGTACAAGAATACTTGAAGAGATCCAAAGGATGTGATAATAGTATTTTT
GAATACTTTGCAAATGAACAAGATGCTGAATCTTTGTTTGTCAAATTGGAAAATGAATTA
GAGAGATGCATTCTTGCTTATTTTGCTTTTCATTGGAGTAAAGCTTCTATGTTAATTACC
CAGGTATTGAGTGTTGATTCTGAGCAGAAAAGACTCAAGGATTTGGTGTTGGCAGCTACA
AGGAAGCAGAGATTTGAGAAGATAACAAAAGATTTGAAAGTGACTAGGGTATTTTCTACG
CTGGTAGAGGAGATGAAGGCGATTGGAACGGTATCATCTAACGACGGTAATGGTGAGTCC
AGATGTACGGACGTGATGGTGCCGGTGGCTCACAGTCAAAGAAGTCCGGTGCTCCTCCTT
ATGGGTGGTGGAATGGGAGCTGGCAAAAGTACTGTCCTTAAAGACATCCTCAAACAGCCA
TTCTGGTCGGAAGCAGCTGCAAATGCAGTGGTAGTAGAGGCAGATGCTTTCAAGGAGACA
GACGTAATATACAGAGCCCTTAGCTCAAGAGGTCATCATAATGACATGCTTCAAACTGCT
GAATTGGTACATCAAAATTCAACAGATGCAGCATCTTCTCTGCTAGTCACAGCTCTTAAC
GAGGGGCGCGATGTTATAATGGATGGAACCTTATCATGGGAGCCATTTGTTGAGCAGACC
ATAGCCATGGCAAGAAATGTACACAAACATCGATATCGAATGGGGGAAGGTTACAAGGTT
GCAGAGGATGGCACAGTTACTGAAAATTATTGGGAACAAATTGAACAGGAAAAAGGAGAA
GAGTCAGCTAATAAGATCAGTAAACCTTATAGAATAGAATTGGTGGGAGTTGTATGTGAT
CCTTACCTAGCTGTTGTTAGAGGCATCAGGCGAGCTATAGCAACAGGGAGGGCAGTTAGA
GTAAAGCCCCAATTGAAATCTCACAAGAGATTCGCAAATGCATTTCCCAAATACTGTGAA
CTTGTTGATAACGCCAGGCTATACTGCACCAATGCCTTAGGCTCAAAACCACCGTTAATA
GCATGGAAAGATGGAGAGAACAAAATGTTGGTGGAACCAGAGGACATCAAGTGTTTGGAA
ATGGTGAAAAAACTGAAGGAAGAAGCAGAATCAATTTACGAGCTGTACGAGGGAGATGAT
GTATTGTCTCTGCAGACTCCTGGTTCAGTCTGGAAAGACATGGTTTTAATACCTACAAGG
TCTACTCTCCAACAAGAGCTCAAAACTGCAATTCTAAAAATTGAAAACAGGGGAAAATAG