Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042072
CDS Infomation

pacid=37450441 polypeptide=PGSC0003DMP400028513 locus=PGSC0003DMG400016316 ID=PGSC0003DMT400042072.v4.03 annot-version=v4.03
Sequence

ATGTCAAACATATTTGATGAAGAGAGTTTAATGTTTCAAAAGAAAATTTTGGAGAGGTCA
GGTTTAGGTGATAAGACGTACATTCCGATAGATACAATTCCGTTTAAATATACGTTTAGT
AGTTACCTAAATGAAGCAGAGGAGGAAATATGTGGTGCCATAGATGATCTGTTGGCGAAA
ACGAGAGTGAAGATTGGAGATATTGGGATTATTATTGTGAATTCTAGTGCGTTTAATCCA
TCGCCTTCTCTTTCTTCCATGATTGTGAACCATTATAAGCTTGGAGTCAATGTGATAACT
TATAACCTTGGTGGCATGGGCTGCAGTGCTGGACTCATTTCTGTCGACCTAGCTAACCGG
CTTTTACAGGGGCAAGCTAATACGTATGCACTTATAGTAAGCGCAGAAATAGTCTCAAGT
GCCTTCTATATAGGGAAGCAGAGATCAAGGCTTTTACCAAATTGTCTTTTCCGGATGGGT
TCATCTGCTATTCTTCTTTCAAACCGTTCCTCTGATCGTCCACGCTCCAAATATCAACTG
ATGCACGTTGTCCGCACCCATAAAGGTGCGGATGACAGAGCTTATAGATGTGCCTATATA
GATGAGGATGAAAATGGAAAGAGAAGCGTGTTGTTGTCAAAAGACTTGATGGCAGTTGCT
GGTGAGGCTTTAAAAACTAATATCACAACTCTCGGCCCTTTAGTCCTCCCAATGTCCGAG
CAGCTACTCTTTTTCGCCTCATTAATCGCGAGAAAGGTCTTTGAGAGGAAAATGAAACCA
TATATCCCTGATTTCAAAATGGCGTTTGAGCATTTCTGTATACATGCAGGGGGGAGAGCT
GTGCTGGATGAGCTTCAGAAGAATCTTGACCTCCCGGAATTTCTTATGGAGCCTTCAAGA
ATGACTCTTTATAGATTTGGAAACACTTCAAGTAGCTCAATTTGGTACAATTTGGCCTAT
TCCGAGGCAAAAGGGAGGATAAAGAAGGGTGACAGAGTATGGCAAATTGGTTTTGGATCA
GGCTTCAAATGTAACAGTGTAGTGTGGCGTGCGCTGAGGGCTGTCGATGCAGCCAAACAA
AAGAACCCTTGGACAGATGAGATTCAGGATTTCCCTGTTCATCGATCCCATCTTGATGCT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400028513
PEP Infomation

pacid=37450441 transcript=PGSC0003DMT400042072 locus=PGSC0003DMG400016316 ID=PGSC0003DMT400042072.v4.03 annot-version=v4.03
Sequence

MSNIFDEESLMFQKKILERSGLGDKTYIPIDTIPFKYTFSSYLNEAEEEICGAIDDLLAK
TRVKIGDIGIIIVNSSAFNPSPSLSSMIVNHYKLGVNVITYNLGGMGCSAGLISVDLANR
LLQGQANTYALIVSAEIVSSAFYIGKQRSRLLPNCLFRMGSSAILLSNRSSDRPRSKYQL
MHVVRTHKGADDRAYRCAYIDEDENGKRSVLLSKDLMAVAGEALKTNITTLGPLVLPMSE
QLLFFASLIARKVFERKMKPYIPDFKMAFEHFCIHAGGRAVLDELQKNLDLPEFLMEPSR
MTLYRFGNTSSSSIWYNLAYSEAKGRIKKGDRVWQIGFGSGFKCNSVVWRALRAVDAAKQ
KNPWTDEIQDFPVHRSHLDA*

Transcript Sequence

Transcript ID

PGSC0003DMT400042072
Transcript Infomation

pacid=37450441 locus=PGSC0003DMG400016316 ID=PGSC0003DMT400042072.v4.03 annot-version=v4.03
Sequence

ATGTCAAACATATTTGATGAAGAGAGTTTAATGTTTCAAAAGAAAATTTTGGAGAGGTCA
GGTTTAGGTGATAAGACGTACATTCCGATAGATACAATTCCGTTTAAATATACGTTTAGT
AGTTACCTAAATGAAGCAGAGGAGGAAATATGTGGTGCCATAGATGATCTGTTGGCGAAA
ACGAGAGTGAAGATTGGAGATATTGGGATTATTATTGTGAATTCTAGTGCGTTTAATCCA
TCGCCTTCTCTTTCTTCCATGATTGTGAACCATTATAAGCTTGGAGTCAATGTGATAACT
TATAACCTTGGTGGCATGGGCTGCAGTGCTGGACTCATTTCTGTCGACCTAGCTAACCGG
CTTTTACAGGGGCAAGCTAATACGTATGCACTTATAGTAAGCGCAGAAATAGTCTCAAGT
GCCTTCTATATAGGGAAGCAGAGATCAAGGCTTTTACCAAATTGTCTTTTCCGGATGGGT
TCATCTGCTATTCTTCTTTCAAACCGTTCCTCTGATCGTCCACGCTCCAAATATCAACTG
ATGCACGTTGTCCGCACCCATAAAGGTGCGGATGACAGAGCTTATAGATGTGCCTATATA
GATGAGGATGAAAATGGAAAGAGAAGCGTGTTGTTGTCAAAAGACTTGATGGCAGTTGCT
GGTGAGGCTTTAAAAACTAATATCACAACTCTCGGCCCTTTAGTCCTCCCAATGTCCGAG
CAGCTACTCTTTTTCGCCTCATTAATCGCGAGAAAGGTCTTTGAGAGGAAAATGAAACCA
TATATCCCTGATTTCAAAATGGCGTTTGAGCATTTCTGTATACATGCAGGGGGGAGAGCT
GTGCTGGATGAGCTTCAGAAGAATCTTGACCTCCCGGAATTTCTTATGGAGCCTTCAAGA
ATGACTCTTTATAGATTTGGAAACACTTCAAGTAGCTCAATTTGGTACAATTTGGCCTAT
TCCGAGGCAAAAGGGAGGATAAAGAAGGGTGACAGAGTATGGCAAATTGGTTTTGGATCA
GGCTTCAAATGTAACAGTGTAGTGTGGCGTGCGCTGAGGGCTGTCGATGCAGCCAAACAA
AAGAACCCTTGGACAGATGAGATTCAGGATTTCCCTGTTCATCGATCCCATCTTGATGCT
TAA