Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042064
CDS Infomation

pacid=37452572 polypeptide=PGSC0003DMP400028510 locus=PGSC0003DMG400016314 ID=PGSC0003DMT400042064.v4.03 annot-version=v4.03
Sequence

ATGGCGACTCGTTTCCCGGCAACTACTCACTCACGCGTCGTCGCGGCAAGCTCCGGTGAA
CCCAAAGTAGAATACCCATTTTCCGTTTCGACCAGAAAATGGCAAGTAGTAACAGAAAGG
AGAAGGAAGAATTCAAGAATCAAAGCTACAGATTCAGATTCATTCTTGGAAATGTGGAAG
AGAGCAATGGAACGTGAGAGAAAGTCAGCTGAGTTCAAAAGAATAGCTGAGAACATTGCT
CCTCCTGAAGTGGAAGAAAGCCCTGAGATATTGGAGAAGAAGACCGAGGAATTCAACAAG
ATTCTTCAAGTTTCTCCTGAAGAAAGAGATAAAGTTCAAAGTATGCAGATCATTGATCGT
GCTGCTGCTGCCCTTGCTGCCGCCAAAGCATTGATTAAGGAGAATCCATTGCCCCGAAAG
GACGATGATGAGGCTGATAAAAATAACAAACAAGGAGCGACGGGAAATGTCATTTCCATT
GTGCCTCGATCTGGAACTATGATGGGAACACCAGGTCCAAGCTTCTGGTCCTGGACACCT
CCTTCAGACAGTTCTTTTGATGACATTCAGATGAAGTCAGATGTCTCTCTGTCTCCAGAC
CCACCAAGCCCTGTTATAGAGAAAGAACGATCTCCAGATTTTCTATCTATCCCATTTCAG
AGTGCTACGATTGATAGAAAACATAGTCCTCCTCTTCCACCGCTTCAGTCACATTTGGAG
GTTGAAAATTTGGAAGATTCCAGCTCAACACCTGAGATACCTCACCAGGTGGAGGAACGT
GAACTTGGCATTCTGTTCTCTGCAAATGCAGCAGAAGCAGCTTATGCCCTTCACCAGGAA
AACGAGGCATCATCCGAGGGAATCAGTCCTGATGGATCAAGATGGTGGAAGGAGACCGGG
ACTGAACGACGACCTGATGGGGTGGTCTGCAAGTGGACGCTAACCAGGGGCATTAGTGCT
GACAAAACTGTTGAATGGGAAGACAAGTATTGGGAAGCTGCTGATGAATTTGGTCATAAG
GAACTAGGTTCTGAGAAGTCAGGACGAGATGCTGCTGGAAATGTATGGCATGAGTTCTGG
AAAGAATCAATGTGGCAGAGTGGTGGGCTTGTCCACATGGAGAAAACTGCAGATAAGTGG
GGAAGGAATAATAAAGGTGAGGAGTGGCATGAGAAATGGTGGGAGCACTATGGTGCTGGT
GGCCAAGCGGAGAAATGGGCCCATAAGTGGTGCAGCATTGATCCAAATACACCCCTTGAT
GCTGGTCATGCTCATGTTTGGCATGAAAGGTGGGGTGAGAAGTATGATGGAAAAGGCGGC
AGCATAAAATATACTGATAAATGGGCCGAGCGCTTTGAAGTAGATGGTTGGTCAAAATGG
GGTGATAAATGGGACGAGAACTTTGATCTAAATGGACATGGCGTGAAGCAAGGGGAGACA
TGGTGGGCAGGAAAACATGGAGAACGTTGGAATCGTACTTGGGGAGAGGGCCACAATGGT
TCAGGATGGGTGCACAAGTATGGAAAGAGCAGCGATGGGGAGCACTGGGACACTCATGTA
AACGAAGAAACATGGTATGAGAGATTCCCTCATTTTGGTTTCTTCCATTGTTTTCAGAAT
TCAGTCCAACTCCGTGAAGTCAAGAGACCTTCTGATTGGCCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400028510
PEP Infomation

pacid=37452572 transcript=PGSC0003DMT400042064 locus=PGSC0003DMG400016314 ID=PGSC0003DMT400042064.v4.03 annot-version=v4.03
Sequence

MATRFPATTHSRVVAASSGEPKVEYPFSVSTRKWQVVTERRRKNSRIKATDSDSFLEMWK
RAMERERKSAEFKRIAENIAPPEVEESPEILEKKTEEFNKILQVSPEERDKVQSMQIIDR
AAAALAAAKALIKENPLPRKDDDEADKNNKQGATGNVISIVPRSGTMMGTPGPSFWSWTP
PSDSSFDDIQMKSDVSLSPDPPSPVIEKERSPDFLSIPFQSATIDRKHSPPLPPLQSHLE
VENLEDSSSTPEIPHQVEERELGILFSANAAEAAYALHQENEASSEGISPDGSRWWKETG
TERRPDGVVCKWTLTRGISADKTVEWEDKYWEAADEFGHKELGSEKSGRDAAGNVWHEFW
KESMWQSGGLVHMEKTADKWGRNNKGEEWHEKWWEHYGAGGQAEKWAHKWCSIDPNTPLD
AGHAHVWHERWGEKYDGKGGSIKYTDKWAERFEVDGWSKWGDKWDENFDLNGHGVKQGET
WWAGKHGERWNRTWGEGHNGSGWVHKYGKSSDGEHWDTHVNEETWYERFPHFGFFHCFQN
SVQLREVKRPSDWP*

Transcript Sequence

Transcript ID

PGSC0003DMT400042064
Transcript Infomation

pacid=37452572 locus=PGSC0003DMG400016314 ID=PGSC0003DMT400042064.v4.03 annot-version=v4.03
Sequence

ATGGCGACTCGTTTCCCGGCAACTACTCACTCACGCGTCGTCGCGGCAAGCTCCGGTGAA
CCCAAAGTAGAATACCCATTTTCCGTTTCGACCAGAAAATGGCAAGTAGTAACAGAAAGG
AGAAGGAAGAATTCAAGAATCAAAGCTACAGATTCAGATTCATTCTTGGAAATGTGGAAG
AGAGCAATGGAACGTGAGAGAAAGTCAGCTGAGTTCAAAAGAATAGCTGAGAACATTGCT
CCTCCTGAAGTGGAAGAAAGCCCTGAGATATTGGAGAAGAAGACCGAGGAATTCAACAAG
ATTCTTCAAGTTTCTCCTGAAGAAAGAGATAAAGTTCAAAGTATGCAGATCATTGATCGT
GCTGCTGCTGCCCTTGCTGCCGCCAAAGCATTGATTAAGGAGAATCCATTGCCCCGAAAG
GACGATGATGAGGCTGATAAAAATAACAAACAAGGAGCGACGGGAAATGTCATTTCCATT
GTGCCTCGATCTGGAACTATGATGGGAACACCAGGTCCAAGCTTCTGGTCCTGGACACCT
CCTTCAGACAGTTCTTTTGATGACATTCAGATGAAGTCAGATGTCTCTCTGTCTCCAGAC
CCACCAAGCCCTGTTATAGAGAAAGAACGATCTCCAGATTTTCTATCTATCCCATTTCAG
AGTGCTACGATTGATAGAAAACATAGTCCTCCTCTTCCACCGCTTCAGTCACATTTGGAG
GTTGAAAATTTGGAAGATTCCAGCTCAACACCTGAGATACCTCACCAGGTGGAGGAACGT
GAACTTGGCATTCTGTTCTCTGCAAATGCAGCAGAAGCAGCTTATGCCCTTCACCAGGAA
AACGAGGCATCATCCGAGGGAATCAGTCCTGATGGATCAAGATGGTGGAAGGAGACCGGG
ACTGAACGACGACCTGATGGGGTGGTCTGCAAGTGGACGCTAACCAGGGGCATTAGTGCT
GACAAAACTGTTGAATGGGAAGACAAGTATTGGGAAGCTGCTGATGAATTTGGTCATAAG
GAACTAGGTTCTGAGAAGTCAGGACGAGATGCTGCTGGAAATGTATGGCATGAGTTCTGG
AAAGAATCAATGTGGCAGAGTGGTGGGCTTGTCCACATGGAGAAAACTGCAGATAAGTGG
GGAAGGAATAATAAAGGTGAGGAGTGGCATGAGAAATGGTGGGAGCACTATGGTGCTGGT
GGCCAAGCGGAGAAATGGGCCCATAAGTGGTGCAGCATTGATCCAAATACACCCCTTGAT
GCTGGTCATGCTCATGTTTGGCATGAAAGGTGGGGTGAGAAGTATGATGGAAAAGGCGGC
AGCATAAAATATACTGATAAATGGGCCGAGCGCTTTGAAGTAGATGGTTGGTCAAAATGG
GGTGATAAATGGGACGAGAACTTTGATCTAAATGGACATGGCGTGAAGCAAGGGGAGACA
TGGTGGGCAGGAAAACATGGAGAACGTTGGAATCGTACTTGGGGAGAGGGCCACAATGGT
TCAGGATGGGTGCACAAGTATGGAAAGAGCAGCGATGGGGAGCACTGGGACACTCATGTA
AACGAAGAAACATGGTATGAGAGATTCCCTCATTTTGGTTTCTTCCATTGTTTTCAGAAT
TCAGTCCAACTCCGTGAAGTCAAGAGACCTTCTGATTGGCCATGA