Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042060
CDS Infomation

pacid=37454378 polypeptide=PGSC0003DMP400028506 locus=PGSC0003DMG400016311 ID=PGSC0003DMT400042060.v4.03 annot-version=v4.03
Sequence

ATGAGGGATGAGTATTCAAAGAAAAGCAAGCTATCTTGGTCCAGAAAATTGGTTAGGAAA
TGGTTCAATTTAAAGGGCAAAACTGTTGAATTTGAATCTGATGAATCTGTTTATGGAGGA
AGTTATGAGTGGAGAACAAGCATCTCGGAGTGGGAACATTGCGCTGTCAAGAAGACCAAA
ACAGAGAAATCAACCAGGGGTATGGAGCATCTCCCACGGGGGAGTGTTAGTCTTGATCGC
CCTAAGATCATAAATGTACAAGATTATAGACTCTTTGTGTCTACATGGAATGTCGGTGGA
GAATCGCCACTGAGCAATTTGAATCTAGATGAATGGCTTCATTCCTCACCCCCTGCAGAT
ATTTATGTGCTTGGATTTCAGGAAATTGTTCCTTTAAATGCTGGTAATATACTGGGAGCC
GAAGACAGTGGCCCTGCCAAAAAGTGGATCGCTCTGATCGGGGAGACATTAAACAACGGT
CCTGGTACTAGTGGAGGTAATGGTTGCTACACTTCTTCTCCTGTTCCAATTGCCGAGTGG
AATGCTGACTTTGAGGGGTCAAATAGATACAAGGCATCGTCCTTCTCTCATCGTCGGTCA
GTTCAGACACCTCAGTGCGGGAGCGTGGAAAATGATCCATCAATCTCGCAACTTCGTGTG
GATGGACGATACAGTGTTTGTGATCGAGTAATTTTTGGACATAGGTCTAGTGATTTTGAT
CCTAATAGGGAGCAGAGGCCAAGTGACTTTTCATCTTCTCGCAGACCAAGTGACTATACC
TCTATTCACAGGCCAAGTGATTATTCATCTGGTCATAGGCCTAGTGACTATTCCTGCGGA
CAAAGACCAAGTGATGTCTCCAGATGGGGCTCATCAGATGATGAATATGGACCTGGAGAT
TCACCTACTGCTTCGTTTTCCCCTTTGAGGAATGGAGGGTATGCTCCTGCAGAAGATGGT
TATAGAATGCCCAGAAATTCAAACTACTGTTTGGCAGCAAGTAAACAAATGGTTGGCATT
TTTCTCACCGTATGGGTGCGGAGTGATTTGAGGGAACATGTTCGGAATATGAAAGTATCA
TGTGTCGGCAGAGGGTTGATGGGGTACCTTAGGAATAAGGGATCTATTTCAATCAGTATG
CAGTTACATCAAACAAGTTTTTGCTTTGTCTGCACTCACTTAACCTCTGGTCAGAAAGAG
GGTGATGAGTTGCGCAGAAATTCTGATGTCATGGAGATCCTAAAGAAGACAAGATTTCCG
CAAGTTAGTGGTGTGGATGAAGAGAAGTCACCAGAAACTATTCTTGAGCACGACCGGGTT
ATTTGGCTTGGGGATCTGAACTATCGAATTGCACTCTCTTATCGTTCTGCAAAAGCACTT
GTTGAGATGCAAAACTGGAGAGGATTGTTGGGAAATGATCAGCTGAGGTTAGAACAGAGA
CGTGGTCGAGTTTTTGAGGGATGGAAAGAAGGAAAGATATATTTCCCACCAACATATAAA
TATTCTAGGAATTCAGATAGGTATTCTGTTGATGACATGCAACCAAAGGACAAGCGTAGA
ACACCTGCATGGTGTGATCGTATTTTGTGGCATGGTGGGGGTCTCCAACAGTTGTCTTAT
GTCCGTGGGGAGTCTAGATTTTCAGATCATAGACCTGTTTTCAGTGTGTTTTTGGCCGAG
GTTGAATCAGAACACAGTAGATTGAGGAAAATGAGACGTTCAAGCTCAAGAATTGAGGTG
GAGGAGCTCTTGCCCTACTCACATGGTTATACCGAGCTCTGCTTCTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028506
PEP Infomation

pacid=37454378 transcript=PGSC0003DMT400042060 locus=PGSC0003DMG400016311 ID=PGSC0003DMT400042060.v4.03 annot-version=v4.03
Sequence

MRDEYSKKSKLSWSRKLVRKWFNLKGKTVEFESDESVYGGSYEWRTSISEWEHCAVKKTK
TEKSTRGMEHLPRGSVSLDRPKIINVQDYRLFVSTWNVGGESPLSNLNLDEWLHSSPPAD
IYVLGFQEIVPLNAGNILGAEDSGPAKKWIALIGETLNNGPGTSGGNGCYTSSPVPIAEW
NADFEGSNRYKASSFSHRRSVQTPQCGSVENDPSISQLRVDGRYSVCDRVIFGHRSSDFD
PNREQRPSDFSSSRRPSDYTSIHRPSDYSSGHRPSDYSCGQRPSDVSRWGSSDDEYGPGD
SPTASFSPLRNGGYAPAEDGYRMPRNSNYCLAASKQMVGIFLTVWVRSDLREHVRNMKVS
CVGRGLMGYLRNKGSISISMQLHQTSFCFVCTHLTSGQKEGDELRRNSDVMEILKKTRFP
QVSGVDEEKSPETILEHDRVIWLGDLNYRIALSYRSAKALVEMQNWRGLLGNDQLRLEQR
RGRVFEGWKEGKIYFPPTYKYSRNSDRYSVDDMQPKDKRRTPAWCDRILWHGGGLQQLSY
VRGESRFSDHRPVFSVFLAEVESEHSRLRKMRRSSSRIEVEELLPYSHGYTELCFF*

Transcript Sequence

Transcript ID

PGSC0003DMT400042060
Transcript Infomation

pacid=37454378 locus=PGSC0003DMG400016311 ID=PGSC0003DMT400042060.v4.03 annot-version=v4.03
Sequence

ATGAGGGATGAGTATTCAAAGAAAAGCAAGCTATCTTGGTCCAGAAAATTGGTTAGGAAA
TGGTTCAATTTAAAGGGCAAAACTGTTGAATTTGAATCTGATGAATCTGTTTATGGAGGA
AGTTATGAGTGGAGAACAAGCATCTCGGAGTGGGAACATTGCGCTGTCAAGAAGACCAAA
ACAGAGAAATCAACCAGGGGTATGGAGCATCTCCCACGGGGGAGTGTTAGTCTTGATCGC
CCTAAGATCATAAATGTACAAGATTATAGACTCTTTGTGTCTACATGGAATGTCGGTGGA
GAATCGCCACTGAGCAATTTGAATCTAGATGAATGGCTTCATTCCTCACCCCCTGCAGAT
ATTTATGTGCTTGGATTTCAGGAAATTGTTCCTTTAAATGCTGGTAATATACTGGGAGCC
GAAGACAGTGGCCCTGCCAAAAAGTGGATCGCTCTGATCGGGGAGACATTAAACAACGGT
CCTGGTACTAGTGGAGGTAATGGTTGCTACACTTCTTCTCCTGTTCCAATTGCCGAGTGG
AATGCTGACTTTGAGGGGTCAAATAGATACAAGGCATCGTCCTTCTCTCATCGTCGGTCA
GTTCAGACACCTCAGTGCGGGAGCGTGGAAAATGATCCATCAATCTCGCAACTTCGTGTG
GATGGACGATACAGTGTTTGTGATCGAGTAATTTTTGGACATAGGTCTAGTGATTTTGAT
CCTAATAGGGAGCAGAGGCCAAGTGACTTTTCATCTTCTCGCAGACCAAGTGACTATACC
TCTATTCACAGGCCAAGTGATTATTCATCTGGTCATAGGCCTAGTGACTATTCCTGCGGA
CAAAGACCAAGTGATGTCTCCAGATGGGGCTCATCAGATGATGAATATGGACCTGGAGAT
TCACCTACTGCTTCGTTTTCCCCTTTGAGGAATGGAGGGTATGCTCCTGCAGAAGATGGT
TATAGAATGCCCAGAAATTCAAACTACTGTTTGGCAGCAAGTAAACAAATGGTTGGCATT
TTTCTCACCGTATGGGTGCGGAGTGATTTGAGGGAACATGTTCGGAATATGAAAGTATCA
TGTGTCGGCAGAGGGTTGATGGGGTACCTTAGGAATAAGGGATCTATTTCAATCAGTATG
CAGTTACATCAAACAAGTTTTTGCTTTGTCTGCACTCACTTAACCTCTGGTCAGAAAGAG
GGTGATGAGTTGCGCAGAAATTCTGATGTCATGGAGATCCTAAAGAAGACAAGATTTCCG
CAAGTTAGTGGTGTGGATGAAGAGAAGTCACCAGAAACTATTCTTGAGCACGACCGGGTT
ATTTGGCTTGGGGATCTGAACTATCGAATTGCACTCTCTTATCGTTCTGCAAAAGCACTT
GTTGAGATGCAAAACTGGAGAGGATTGTTGGGAAATGATCAGCTGAGGTTAGAACAGAGA
CGTGGTCGAGTTTTTGAGGGATGGAAAGAAGGAAAGATATATTTCCCACCAACATATAAA
TATTCTAGGAATTCAGATAGGTATTCTGTTGATGACATGCAACCAAAGGACAAGCGTAGA
ACACCTGCATGGTGTGATCGTATTTTGTGGCATGGTGGGGGTCTCCAACAGTTGTCTTAT
GTCCGTGGGGAGTCTAGATTTTCAGATCATAGACCTGTTTTCAGTGTGTTTTTGGCCGAG
GTTGAATCAGAACACAGTAGATTGAGGAAAATGAGACGTTCAAGCTCAAGAATTGAGGTG
GAGGAGCTCTTGCCCTACTCACATGGTTATACCGAGCTCTGCTTCTTTTGA