Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042056
CDS Infomation

pacid=37453288 polypeptide=PGSC0003DMP400028503 locus=PGSC0003DMG400016310 ID=PGSC0003DMT400042056.v4.03 annot-version=v4.03
Sequence

ATGGGCACAATTTCTTATAAGTCGGATGATGAATACTCAACTATTACTGATAAAGGAGAC
ATCGGATTTGTCGACTTTGACAAATATAAATCAGCTGGTAGCTACAATCCAAATGAAGAG
AGTGATATAGTTGTTGTATCTGTTCCATTTCGGCTGGTAGCAGGAAAACCTAAATCAGGA
TTTGTTGGGGAAACTGTTGTCGATTCAGTCACAATAGAGAATACCACTAATGAAACCCAG
GAGCTGTGGTCAATTAAGATCTATGACTCAAAACCTGAGGATTCATTCACTCTTTCTCTG
ATGAAACCTCCAACTGCTTGTTCTGATGTGCAATATGTTGAAGAATTCATGGAATCCTTT
AGCTTAGAGGATAGAATGTTACGACCAGGTCAAACACTTACAATATGGCTGACTTGTAAA
CCCAAAGAAATTGGATTGCACACATCAGCTGTGCATTTCAATGTGGGTGATGACACCATA
GAAAGATTAGTTTTTGTCTTGGCTGAGGATAAGGTTTCCCAGTCTCTGGCTTCGAGGAGG
CCATTCCACAGAGACAGAAAGAAGAAAGTACCAGCAGTAGATGTTTATGCTGCAAATGCA
TTTGTTGTGGGTTCTCGTCCTACAAGGGCTCCAAATCGAGGATTCAGATACAGACTTCCT
TCATATCCAATTCCAGGGGATATAAGGGAAATGATAGAGAAGAAACAATTTCCTGATGTT
ATTGGGGAAGGTTTAAGAAGAGACAATTACATTGCTTATTTTAGAACTTTACTAGCAATT
GAAGAAATCAAGATGGAGGAAGACATGAGGGACTATGATATGGAGTCAGTCACCATGAAG
CGCAAAGGACTACAGTTTTTGTCCCTTGATGTCCCAGGGCTAGCCGAGAGGAGGCCATCA
CTTGTTTATGGAGATTTTATCTTTGCAAGGATAGCTTCTGCAGATGCTAGTGAGACCACC
CCTTACCAGGGTTATATCCACCGAGTTGAGGCGGAAGAAGTATATTTGAAGTTTGATGAA
GAATTCCACATCAATCATGTTCCTGGAAATCTGTACAATGTGCAGTTTTCATTCAATCGT
ACGGGTGTGCGGAGGTTACATCAAGCCATTGAAGCTACAGAAAGCTTAAATGGAGAAATT
CTCTTTCCATCAGGCATATCCAGAAAGAGAAATATACAAGCTGCTAGACTGGCACCTAAT
TCATGTATGCTTAACAAGGAACAAACAAGTGCAGTTGAAAAGATTCTTGGGTGCAAAGGA
GGGGCTCCATATGTTATCCATGGGCCTCCTGGTACAGGCAAAACAAGGACTCTTATAGAA
GCTATCATCCAGCTACATATTATGAGGAAAGATACTCAAGTTCTTGTCTGTGCACCTTCA
AATAGTGCTGCAGACCATATACTTGAAAAACTTGTCAGTCAGCAGAATGTTGAAGTGCAG
GAGCATGAGATTTTTAGGTTGAATGCACTCACACGTCCTTTAGATGATGTGAATCCTAGT
TACCTGCGTTTTTGCAATGCTGAAGATAATTCTTTTAAGTGCCCTCTTCTCAGGGACCTT
AGAAGATATAGGGTTATCATATCTACATATGCTAGTGCATGTCTTCTTTATTCAGAAGGC
ATCAAACGGGGACACTTCTCTCATATTTTCTTGGATGAGGCAGGACAGGCATCAGAGCCT
GATACCATGGTTCCTCTGTCACATCTTTTAAAGAAAGAGACAGTAGTTGTACTTGCTGGT
GACCCACAGCAACTTGGTCCCATAGTTTTCTCAAAAGATGCTGAAAATTATGGATTGGCA
ACTTCATTTATGGAAAGGTTATTTGAATGCCAGTTATATGGTGCGCTCAACGAAAATTAT
GCTACCAGACTAGTAAGGAACTATCGGTGTCATCCAGTAATTCTGCAGCTTCCCTCAGAA
ATGTTTTATGAAGGAGAGTTGATCCCATGTAAAGAAGATAAAACTTTTACCCAGACTTGG
GTGGACATGCTTCCAAACAAGGAATTTCCGTTGCTTTTCATTGGCATACAAGGTTGTGAT
GAAAGGGAAGGAAACAACCCATCATGGTTCAACAGGATCGAAGCAAGCAAGGTAGTAGAG
ATCATCAGAGATCTGATAGGGAACAAAGGTCTGAAAGAGGAAGACATTGGGGTGATAACA
CCTTATAGGCAGCAAGTACTGAAAATAAGAACAGCCCTTGAGAGCTTTGATTGGGCTAAT
ATAAAGGTTGGCAGCGTAGAGCAATTTCAAGGTCAGGAGAGAGAAGTTATTATCATATCG
ACCGTCCGGTCAACGATACAGCATAATGACTTTGACAGAGTCCATTATTTAGGATTCTTA
AGCAATCCGAGAAGGTTCAATGTTGCTGTTACAAGAGCCAGATCATTGCTTGTAGTTATC
GGGAATCCACACATCATCTGCAAGGATCCCTACTGGAACAAGCTTTTGTGGTATTGCGCA
GACAATGGCTCCTACAAGGGCTGCTTCTTACCTGAAAAACTGGAGATCGTTCAAGACGAC
TCGGAACAGGCAAATAATTGGAATGATGTCGGGGCACAAGTAAATAACTGGGACTGTCAA
GGAGCACAAGCTAATGATTGGGACCAAGACCAGGCGGGAAAAGTTAACGATTGGGACCAA
GACCAGGCGGGACAAGTTAACGATTGGGACCAAGACCAAGGGGGACAAGTCAACAATTGG
GACCAAGATGAAGGGGAACTAGCTAAGAATTGGAATGAGGAAGGCACTTGCGTCAATGAA
GAGAAACATAGTCTTCAGCCATCTCCTGATGTTCAAGGTACAATGCCCCAAACAGATTAC
ATCCCGGACCCTGTTATGGATGAAGCTGAATGGTCTGATGGTTGGAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400028503
PEP Infomation

pacid=37453288 transcript=PGSC0003DMT400042056 locus=PGSC0003DMG400016310 ID=PGSC0003DMT400042056.v4.03 annot-version=v4.03
Sequence

MGTISYKSDDEYSTITDKGDIGFVDFDKYKSAGSYNPNEESDIVVVSVPFRLVAGKPKSG
FVGETVVDSVTIENTTNETQELWSIKIYDSKPEDSFTLSLMKPPTACSDVQYVEEFMESF
SLEDRMLRPGQTLTIWLTCKPKEIGLHTSAVHFNVGDDTIERLVFVLAEDKVSQSLASRR
PFHRDRKKKVPAVDVYAANAFVVGSRPTRAPNRGFRYRLPSYPIPGDIREMIEKKQFPDV
IGEGLRRDNYIAYFRTLLAIEEIKMEEDMRDYDMESVTMKRKGLQFLSLDVPGLAERRPS
LVYGDFIFARIASADASETTPYQGYIHRVEAEEVYLKFDEEFHINHVPGNLYNVQFSFNR
TGVRRLHQAIEATESLNGEILFPSGISRKRNIQAARLAPNSCMLNKEQTSAVEKILGCKG
GAPYVIHGPPGTGKTRTLIEAIIQLHIMRKDTQVLVCAPSNSAADHILEKLVSQQNVEVQ
EHEIFRLNALTRPLDDVNPSYLRFCNAEDNSFKCPLLRDLRRYRVIISTYASACLLYSEG
IKRGHFSHIFLDEAGQASEPDTMVPLSHLLKKETVVVLAGDPQQLGPIVFSKDAENYGLA
TSFMERLFECQLYGALNENYATRLVRNYRCHPVILQLPSEMFYEGELIPCKEDKTFTQTW
VDMLPNKEFPLLFIGIQGCDEREGNNPSWFNRIEASKVVEIIRDLIGNKGLKEEDIGVIT
PYRQQVLKIRTALESFDWANIKVGSVEQFQGQEREVIIISTVRSTIQHNDFDRVHYLGFL
SNPRRFNVAVTRARSLLVVIGNPHIICKDPYWNKLLWYCADNGSYKGCFLPEKLEIVQDD
SEQANNWNDVGAQVNNWDCQGAQANDWDQDQAGKVNDWDQDQAGQVNDWDQDQGGQVNNW
DQDEGELAKNWNEEGTCVNEEKHSLQPSPDVQGTMPQTDYIPDPVMDEAEWSDGWK*

Transcript Sequence

Transcript ID

PGSC0003DMT400042056
Transcript Infomation

pacid=37453288 locus=PGSC0003DMG400016310 ID=PGSC0003DMT400042056.v4.03 annot-version=v4.03
Sequence

ATGGGCACAATTTCTTATAAGTCGGATGATGAATACTCAACTATTACTGATAAAGGAGAC
ATCGGATTTGTCGACTTTGACAAATATAAATCAGCTGGTAGCTACAATCCAAATGAAGAG
AGTGATATAGTTGTTGTATCTGTTCCATTTCGGCTGGTAGCAGGAAAACCTAAATCAGGA
TTTGTTGGGGAAACTGTTGTCGATTCAGTCACAATAGAGAATACCACTAATGAAACCCAG
GAGCTGTGGTCAATTAAGATCTATGACTCAAAACCTGAGGATTCATTCACTCTTTCTCTG
ATGAAACCTCCAACTGCTTGTTCTGATGTGCAATATGTTGAAGAATTCATGGAATCCTTT
AGCTTAGAGGATAGAATGTTACGACCAGGTCAAACACTTACAATATGGCTGACTTGTAAA
CCCAAAGAAATTGGATTGCACACATCAGCTGTGCATTTCAATGTGGGTGATGACACCATA
GAAAGATTAGTTTTTGTCTTGGCTGAGGATAAGGTTTCCCAGTCTCTGGCTTCGAGGAGG
CCATTCCACAGAGACAGAAAGAAGAAAGTACCAGCAGTAGATGTTTATGCTGCAAATGCA
TTTGTTGTGGGTTCTCGTCCTACAAGGGCTCCAAATCGAGGATTCAGATACAGACTTCCT
TCATATCCAATTCCAGGGGATATAAGGGAAATGATAGAGAAGAAACAATTTCCTGATGTT
ATTGGGGAAGGTTTAAGAAGAGACAATTACATTGCTTATTTTAGAACTTTACTAGCAATT
GAAGAAATCAAGATGGAGGAAGACATGAGGGACTATGATATGGAGTCAGTCACCATGAAG
CGCAAAGGACTACAGTTTTTGTCCCTTGATGTCCCAGGGCTAGCCGAGAGGAGGCCATCA
CTTGTTTATGGAGATTTTATCTTTGCAAGGATAGCTTCTGCAGATGCTAGTGAGACCACC
CCTTACCAGGGTTATATCCACCGAGTTGAGGCGGAAGAAGTATATTTGAAGTTTGATGAA
GAATTCCACATCAATCATGTTCCTGGAAATCTGTACAATGTGCAGTTTTCATTCAATCGT
ACGGGTGTGCGGAGGTTACATCAAGCCATTGAAGCTACAGAAAGCTTAAATGGAGAAATT
CTCTTTCCATCAGGCATATCCAGAAAGAGAAATATACAAGCTGCTAGACTGGCACCTAAT
TCATGTATGCTTAACAAGGAACAAACAAGTGCAGTTGAAAAGATTCTTGGGTGCAAAGGA
GGGGCTCCATATGTTATCCATGGGCCTCCTGGTACAGGCAAAACAAGGACTCTTATAGAA
GCTATCATCCAGCTACATATTATGAGGAAAGATACTCAAGTTCTTGTCTGTGCACCTTCA
AATAGTGCTGCAGACCATATACTTGAAAAACTTGTCAGTCAGCAGAATGTTGAAGTGCAG
GAGCATGAGATTTTTAGGTTGAATGCACTCACACGTCCTTTAGATGATGTGAATCCTAGT
TACCTGCGTTTTTGCAATGCTGAAGATAATTCTTTTAAGTGCCCTCTTCTCAGGGACCTT
AGAAGATATAGGGTTATCATATCTACATATGCTAGTGCATGTCTTCTTTATTCAGAAGGC
ATCAAACGGGGACACTTCTCTCATATTTTCTTGGATGAGGCAGGACAGGCATCAGAGCCT
GATACCATGGTTCCTCTGTCACATCTTTTAAAGAAAGAGACAGTAGTTGTACTTGCTGGT
GACCCACAGCAACTTGGTCCCATAGTTTTCTCAAAAGATGCTGAAAATTATGGATTGGCA
ACTTCATTTATGGAAAGGTTATTTGAATGCCAGTTATATGGTGCGCTCAACGAAAATTAT
GCTACCAGACTAGTAAGGAACTATCGGTGTCATCCAGTAATTCTGCAGCTTCCCTCAGAA
ATGTTTTATGAAGGAGAGTTGATCCCATGTAAAGAAGATAAAACTTTTACCCAGACTTGG
GTGGACATGCTTCCAAACAAGGAATTTCCGTTGCTTTTCATTGGCATACAAGGTTGTGAT
GAAAGGGAAGGAAACAACCCATCATGGTTCAACAGGATCGAAGCAAGCAAGGTAGTAGAG
ATCATCAGAGATCTGATAGGGAACAAAGGTCTGAAAGAGGAAGACATTGGGGTGATAACA
CCTTATAGGCAGCAAGTACTGAAAATAAGAACAGCCCTTGAGAGCTTTGATTGGGCTAAT
ATAAAGGTTGGCAGCGTAGAGCAATTTCAAGGTCAGGAGAGAGAAGTTATTATCATATCG
ACCGTCCGGTCAACGATACAGCATAATGACTTTGACAGAGTCCATTATTTAGGATTCTTA
AGCAATCCGAGAAGGTTCAATGTTGCTGTTACAAGAGCCAGATCATTGCTTGTAGTTATC
GGGAATCCACACATCATCTGCAAGGATCCCTACTGGAACAAGCTTTTGTGGTATTGCGCA
GACAATGGCTCCTACAAGGGCTGCTTCTTACCTGAAAAACTGGAGATCGTTCAAGACGAC
TCGGAACAGGCAAATAATTGGAATGATGTCGGGGCACAAGTAAATAACTGGGACTGTCAA
GGAGCACAAGCTAATGATTGGGACCAAGACCAGGCGGGAAAAGTTAACGATTGGGACCAA
GACCAGGCGGGACAAGTTAACGATTGGGACCAAGACCAAGGGGGACAAGTCAACAATTGG
GACCAAGATGAAGGGGAACTAGCTAAGAATTGGAATGAGGAAGGCACTTGCGTCAATGAA
GAGAAACATAGTCTTCAGCCATCTCCTGATGTTCAAGGTACAATGCCCCAAACAGATTAC
ATCCCGGACCCTGTTATGGATGAAGCTGAATGGTCTGATGGTTGGAAATAA