Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042032
CDS Infomation

pacid=37450684 polypeptide=PGSC0003DMP400028482 locus=PGSC0003DMG400016302 ID=PGSC0003DMT400042032.v4.03 annot-version=v4.03
Sequence

ATGATTATTTTTTCTTCAAGAAATTTGTTGATTTTGTTATTAATATGTACTGTAGCTATA
GTTGTAATTCCAAAATTAGCGTCAACACAATATTGTGGATGTACAGAAGGATTGTGTTGC
AGTAGATGGGGTTATTGTGGCAGCGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGG
CCTTGTTATACTTCTTCGACAAAAAATTACAATCATAATAATAATAATAATAACAATAGA
GTTTCTGATATTGTTAGTGAATCTTTTTTCAATGGAATTGCAAATCAAACTTCTTCAAAT
TGTGAAGGCAAAGGATTTTACGCAAGATCTGTGTTTCTTGAAGCTTTAAAGTCTTATCCT
GAATTCGCAACGACTGATTTTTCTGATGATGATAATAAGCGTGAAATTGCTGCTTTCTTT
GCTCATGTCACACATGAGACTGGACAAATGTGTTACATAAATGAGATAAATGGTTCATCT
AGGGACTATTGTGACATGAGAAAGTCAGAGTACCCTTGTGTCTCTGGGCAAAATTATTAT
GGTAGAGGACCAATCCAACTATCATGGAACTTCAACTATGGTCCGGCTGGAAAAGACATT
GGATTCGATGGCCTTAACGACCCCGATATTGTGTCTAGAGATAGTTTAATATCATTCAAA
ACTGCCTTATGGTACTGGATGAACACTTGCCATCCTCTCTTAACTTCTGGCCAAGGTTTC
GGGGCTACGATTCGAGCTATTAATGGTCCTCTTGAGTGTGATGGTGCCCTTCCTCAGCCT
GTTGCTAGAAGGGTTCAACATTATGTTCAGTATTGCCACCAACTTGGTGTAGATACTGGG
GATAATCTCACTTGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028482
PEP Infomation

pacid=37450684 transcript=PGSC0003DMT400042032 locus=PGSC0003DMG400016302 ID=PGSC0003DMT400042032.v4.03 annot-version=v4.03
Sequence

MIIFSSRNLLILLLICTVAIVVIPKLASTQYCGCTEGLCCSRWGYCGSGKAYCGQGCQGG
PCYTSSTKNYNHNNNNNNNRVSDIVSESFFNGIANQTSSNCEGKGFYARSVFLEALKSYP
EFATTDFSDDDNKREIAAFFAHVTHETGQMCYINEINGSSRDYCDMRKSEYPCVSGQNYY
GRGPIQLSWNFNYGPAGKDIGFDGLNDPDIVSRDSLISFKTALWYWMNTCHPLLTSGQGF
GATIRAINGPLECDGALPQPVARRVQHYVQYCHQLGVDTGDNLTC*

Transcript Sequence

Transcript ID

PGSC0003DMT400042032
Transcript Infomation

pacid=37450684 locus=PGSC0003DMG400016302 ID=PGSC0003DMT400042032.v4.03 annot-version=v4.03
Sequence

ATGATTATTTTTTCTTCAAGAAATTTGTTGATTTTGTTATTAATATGTACTGTAGCTATA
GTTGTAATTCCAAAATTAGCGTCAACACAATATTGTGGATGTACAGAAGGATTGTGTTGC
AGTAGATGGGGTTATTGTGGCAGCGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGG
CCTTGTTATACTTCTTCGACAAAAAATTACAATCATAATAATAATAATAATAACAATAGA
GTTTCTGATATTGTTAGTGAATCTTTTTTCAATGGAATTGCAAATCAAACTTCTTCAAAT
TGTGAAGGCAAAGGATTTTACGCAAGATCTGTGTTTCTTGAAGCTTTAAAGTCTTATCCT
GAATTCGCAACGACTGATTTTTCTGATGATGATAATAAGCGTGAAATTGCTGCTTTCTTT
GCTCATGTCACACATGAGACTGGACAAATGTGTTACATAAATGAGATAAATGGTTCATCT
AGGGACTATTGTGACATGAGAAAGTCAGAGTACCCTTGTGTCTCTGGGCAAAATTATTAT
GGTAGAGGACCAATCCAACTATCATGGAACTTCAACTATGGTCCGGCTGGAAAAGACATT
GGATTCGATGGCCTTAACGACCCCGATATTGTGTCTAGAGATAGTTTAATATCATTCAAA
ACTGCCTTATGGTACTGGATGAACACTTGCCATCCTCTCTTAACTTCTGGCCAAGGTTTC
GGGGCTACGATTCGAGCTATTAATGGTCCTCTTGAGTGTGATGGTGCCCTTCCTCAGCCT
GTTGCTAGAAGGGTTCAACATTATGTTCAGTATTGCCACCAACTTGGTGTAGATACTGGG
GATAATCTCACTTGTTAG