Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042014
CDS Infomation

pacid=37452314 polypeptide=PGSC0003DMP400028473 locus=PGSC0003DMG400016296 ID=PGSC0003DMT400042014.v4.03 annot-version=v4.03
Sequence

ATGAGTGTTAAGTATTGGGTTTACAAGCAGAAAATTTGTTTAAGCCTTAGATTGCGGAAG
ATGATGAAGTGCATTTGCTCAGGGGAACAATTAAGGATTGAAGATATTATTCCATCATCC
GAGTCTCTTGCAACTCGGGACTATTCAGCTAGTGGGTATTCTTCGCGAGCTGGTGATGAC
GCCAAGGCAGATACCAGTAACATAGAAGAAGCAGAATCATCGCTTCGTGAGAGTGGCATT
TTGAATTATGAGGAAGCAAGAGCATTATTAGGTCGGCTTGAGTATCAAAAAGGTAACATT
GAGGCTGCTCTTCATGTATTTGAGGGAATAGATATTGCTGCGGTGGTTCCCAAGATAAAG
CTTTCCATTGCAAGAAGAGGTGAGGTACCTAGGCGGAATTCGCTTAGTGATGCTATCCCA
CCTATGTCAATGCATGCAGTAAGTCTTCTCTTTGAGGCCATTTTACTCAAAGCAACATCC
TTGCAGGCTCTTGGGAGGTTCACAGAAGCTGCTCAGTCATGTACAGTGATACTGGATACA
GTTGAGTCTGCTTTGCCAGATGGCTTACCTGAAAACTTTTCTACTGATTGCAAATTGTTG
GAAACGTTGAACAAGGCGGTGGAGTTACTTCCTGAGCTGTTGAAGCTAGCTTGTGCTCCT
CAAGAAGCAATTTTGTCGTATAGAAGGGCCCTGCTTTATTGTTGGAATCTTGACGTGGAA
ACGAGAAGCAAAATAGAAAAGGAGTATGCTGTATTTCTCTTATACAGTGGCACTGATGCA
GCTCCTCCAAATCTTCGTGCACAGGCAGAAGGTTCCTTCATACCTAGAAACAATATAGAA
GAAGCTATATTGCTGCTTCTGGTTCTTCTAAGAAGATACATCCTCAATAAAATTGTATGG
GATCCATCGATCTTGGATCACCTCAGTTTTGCATTATCCATTGCAGGTGAGTTTAGGGCA
CTTGCCCGTCAGGTTGAGGAATTGCTCCCTGGAATTGTTGTTAGAAGACAAAAGTACACT
ATCCTTGCCCTGTGCTATTATGCAGAGGGTGATGACATGGCCGCTTTGAATCTGTTAAGG
AACTTGATGAATAGTAGGGACAATAAGAACGGCATATTTGAGTTAGTACTTGCTGCAAAA
ATTTGTGCAGAGTATCCTAATTTATTGGAAGAAGGGATGAGGTATGCCCGGAAAGTGCTC
CCAAAAATTGAAGGGAAATGTAACCAGATGGCTAGTGTTGCAAAATGCTTACTTGGTCTT
CTGCTCTCAGGTCGATCTCGGGCCATCGTGTCTGATTCTGAGAGAACCTCAAGATTGTGT
GAGGCTCTTGAATCACTTGACTCGGCACATAAGATGACCGGAGGAAGAAATCCTAATGTT
CTTTTCTATCTTAGTTTGGAGAATGCAGAGCAGAGAAAGTTGGACATTGCTCTCTACTAT
GCAAAGCAGCTATTGAAGTTGGAGGGGGGTTCTACTCTCAAAGGATGGCTTCTTCTAGCT
CGCATACTATCTGCTCAAAAGAGGTATATAGATGCGGAAAGCATAATTAATGCTGCACTA
GACGAAACAGGAAAATGGAATCAAGGAGAACTGCTCCGCACTAAGGCTAAACTACAGATT
GCCCAGGGTCATCTGCGGGATGCCGTGGAGACATATACTCATCTTCTTGCAGTTCTCCAG
GTTCAGAGAAAAAGTTTTGGAGTTCAGAAAAAGTTGGTAAAGGTATGGTTCCTTGCGATA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400028473
PEP Infomation

pacid=37452314 transcript=PGSC0003DMT400042014 locus=PGSC0003DMG400016296 ID=PGSC0003DMT400042014.v4.03 annot-version=v4.03
Sequence

MSVKYWVYKQKICLSLRLRKMMKCICSGEQLRIEDIIPSSESLATRDYSASGYSSRAGDD
AKADTSNIEEAESSLRESGILNYEEARALLGRLEYQKGNIEAALHVFEGIDIAAVVPKIK
LSIARRGEVPRRNSLSDAIPPMSMHAVSLLFEAILLKATSLQALGRFTEAAQSCTVILDT
VESALPDGLPENFSTDCKLLETLNKAVELLPELLKLACAPQEAILSYRRALLYCWNLDVE
TRSKIEKEYAVFLLYSGTDAAPPNLRAQAEGSFIPRNNIEEAILLLLVLLRRYILNKIVW
DPSILDHLSFALSIAGEFRALARQVEELLPGIVVRRQKYTILALCYYAEGDDMAALNLLR
NLMNSRDNKNGIFELVLAAKICAEYPNLLEEGMRYARKVLPKIEGKCNQMASVAKCLLGL
LLSGRSRAIVSDSERTSRLCEALESLDSAHKMTGGRNPNVLFYLSLENAEQRKLDIALYY
AKQLLKLEGGSTLKGWLLLARILSAQKRYIDAESIINAALDETGKWNQGELLRTKAKLQI
AQGHLRDAVETYTHLLAVLQVQRKSFGVQKKLVKVWFLAI*

Transcript Sequence

Transcript ID

PGSC0003DMT400042014
Transcript Infomation

pacid=37452314 locus=PGSC0003DMG400016296 ID=PGSC0003DMT400042014.v4.03 annot-version=v4.03
Sequence

ATGAGTGTTAAGTATTGGGTTTACAAGCAGAAAATTTGTTTAAGCCTTAGATTGCGGAAG
ATGATGAAGTGCATTTGCTCAGGGGAACAATTAAGGATTGAAGATATTATTCCATCATCC
GAGTCTCTTGCAACTCGGGACTATTCAGCTAGTGGGTATTCTTCGCGAGCTGGTGATGAC
GCCAAGGCAGATACCAGTAACATAGAAGAAGCAGAATCATCGCTTCGTGAGAGTGGCATT
TTGAATTATGAGGAAGCAAGAGCATTATTAGGTCGGCTTGAGTATCAAAAAGGTAACATT
GAGGCTGCTCTTCATGTATTTGAGGGAATAGATATTGCTGCGGTGGTTCCCAAGATAAAG
CTTTCCATTGCAAGAAGAGGTGAGGTACCTAGGCGGAATTCGCTTAGTGATGCTATCCCA
CCTATGTCAATGCATGCAGTAAGTCTTCTCTTTGAGGCCATTTTACTCAAAGCAACATCC
TTGCAGGCTCTTGGGAGGTTCACAGAAGCTGCTCAGTCATGTACAGTGATACTGGATACA
GTTGAGTCTGCTTTGCCAGATGGCTTACCTGAAAACTTTTCTACTGATTGCAAATTGTTG
GAAACGTTGAACAAGGCGGTGGAGTTACTTCCTGAGCTGTTGAAGCTAGCTTGTGCTCCT
CAAGAAGCAATTTTGTCGTATAGAAGGGCCCTGCTTTATTGTTGGAATCTTGACGTGGAA
ACGAGAAGCAAAATAGAAAAGGAGTATGCTGTATTTCTCTTATACAGTGGCACTGATGCA
GCTCCTCCAAATCTTCGTGCACAGGCAGAAGGTTCCTTCATACCTAGAAACAATATAGAA
GAAGCTATATTGCTGCTTCTGGTTCTTCTAAGAAGATACATCCTCAATAAAATTGTATGG
GATCCATCGATCTTGGATCACCTCAGTTTTGCATTATCCATTGCAGGTGAGTTTAGGGCA
CTTGCCCGTCAGGTTGAGGAATTGCTCCCTGGAATTGTTGTTAGAAGACAAAAGTACACT
ATCCTTGCCCTGTGCTATTATGCAGAGGGTGATGACATGGCCGCTTTGAATCTGTTAAGG
AACTTGATGAATAGTAGGGACAATAAGAACGGCATATTTGAGTTAGTACTTGCTGCAAAA
ATTTGTGCAGAGTATCCTAATTTATTGGAAGAAGGGATGAGGTATGCCCGGAAAGTGCTC
CCAAAAATTGAAGGGAAATGTAACCAGATGGCTAGTGTTGCAAAATGCTTACTTGGTCTT
CTGCTCTCAGGTCGATCTCGGGCCATCGTGTCTGATTCTGAGAGAACCTCAAGATTGTGT
GAGGCTCTTGAATCACTTGACTCGGCACATAAGATGACCGGAGGAAGAAATCCTAATGTT
CTTTTCTATCTTAGTTTGGAGAATGCAGAGCAGAGAAAGTTGGACATTGCTCTCTACTAT
GCAAAGCAGCTATTGAAGTTGGAGGGGGGTTCTACTCTCAAAGGATGGCTTCTTCTAGCT
CGCATACTATCTGCTCAAAAGAGGTATATAGATGCGGAAAGCATAATTAATGCTGCACTA
GACGAAACAGGAAAATGGAATCAAGGAGAACTGCTCCGCACTAAGGCTAAACTACAGATT
GCCCAGGGTCATCTGCGGGATGCCGTGGAGACATATACTCATCTTCTTGCAGTTCTCCAG
GTTCAGAGAAAAAGTTTTGGAGTTCAGAAAAAGTTGGTAAAGGTATGGTTCCTTGCGATA
TGA