Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041998
CDS Infomation

pacid=37450944 polypeptide=PGSC0003DMP400028460 locus=PGSC0003DMG400016290 ID=PGSC0003DMT400041998.v4.03 annot-version=v4.03
Sequence

ATGGATATTTTAGCACTTGATGATATAATCCATCGTTTGCTTGAAGTTCGTGGCAGACCT
GGAAAACAAGTACAACTTTCTGAGGCTGAAATCAGACAGCTCTGTCTCAAGTCCAGAGAA
ATTTTCTTGCGCCAGCCCAATCTTCTTGAGCTTGATGCACCCATCAAGATCTGCGGGGAT
ATCCATGGCCAGTATTCAGATCTACTGAGGCTGTTTGAATATGGTGGATTACCTCCAAAA
TCCAATTACCTATTCTTGGGTGATTATGTTGATCGGGGGAAGCAAAGTCTGGAAACAATA
TGTCTTCTTCTTGCATATAAAATAAAGTATCCTGAAAACTTTTTCCTTCTGAGGGGTAAC
CATGAATGTGCTTCTGTGAATCGTATATATGGATTCTATGATGAGTGCAAACGAAGGTTC
AATGTTCGACTGTGGAAAGTATTCACAGACTCTTTTAACTGCCTCCCTGTGGCAGCTCTG
ATTGATGAAAAGATTTTGTGTATGCATGGTGGACTCTCTCCTGATCTTCAGCATTTGGAT
CAGATAAGGAACCTTCAACGACCAACTGATGTTCCAGAGAGCGGGTTACTCTGTGATCTT
CTCTGGTCAGATCCTAGTAAAGATGTTAAAGGGTGGGGAATGAATGACCGGGGAGTTTCT
CACACCTTTGGCTCTGATAAGGTCACAGAGTTTCTCCAGAAGCAAGATCTTGATCTTATT
TGTCGTGCCCACCAGGTTGTGGAAGATGGATATGAGTTTTTTGCTGATAGACAACTTGTG
ACGATTTTTTCAGCCCCTAATTATTGTGGCGAGTTTGACAATGCTGGTGCTATGATGAGT
GTGGATGAGACTCTGATGTGTTCTTTTCAGATATTAAAGCCTGCAGAGAAGAAGCCAAAG
TTCGGATTTGGGAGCACTACTACGGCCAAAAATGCAACTCCAGCAAAAACGAAGGTCATT
TCTTGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028460
PEP Infomation

pacid=37450944 transcript=PGSC0003DMT400041998 locus=PGSC0003DMG400016290 ID=PGSC0003DMT400041998.v4.03 annot-version=v4.03
Sequence

MDILALDDIIHRLLEVRGRPGKQVQLSEAEIRQLCLKSREIFLRQPNLLELDAPIKICGD
IHGQYSDLLRLFEYGGLPPKSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASVNRIYGFYDECKRRFNVRLWKVFTDSFNCLPVAALIDEKILCMHGGLSPDLQHLD
QIRNLQRPTDVPESGLLCDLLWSDPSKDVKGWGMNDRGVSHTFGSDKVTEFLQKQDLDLI
CRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKPK
FGFGSTTTAKNATPAKTKVISW*

Transcript Sequence

Transcript ID

PGSC0003DMT400041998
Transcript Infomation

pacid=37450944 locus=PGSC0003DMG400016290 ID=PGSC0003DMT400041998.v4.03 annot-version=v4.03
Sequence

ATGGATATTTTAGCACTTGATGATATAATCCATCGTTTGCTTGAAGTTCGTGGCAGACCT
GGAAAACAAGTACAACTTTCTGAGGCTGAAATCAGACAGCTCTGTCTCAAGTCCAGAGAA
ATTTTCTTGCGCCAGCCCAATCTTCTTGAGCTTGATGCACCCATCAAGATCTGCGGGGAT
ATCCATGGCCAGTATTCAGATCTACTGAGGCTGTTTGAATATGGTGGATTACCTCCAAAA
TCCAATTACCTATTCTTGGGTGATTATGTTGATCGGGGGAAGCAAAGTCTGGAAACAATA
TGTCTTCTTCTTGCATATAAAATAAAGTATCCTGAAAACTTTTTCCTTCTGAGGGGTAAC
CATGAATGTGCTTCTGTGAATCGTATATATGGATTCTATGATGAGTGCAAACGAAGGTTC
AATGTTCGACTGTGGAAAGTATTCACAGACTCTTTTAACTGCCTCCCTGTGGCAGCTCTG
ATTGATGAAAAGATTTTGTGTATGCATGGTGGACTCTCTCCTGATCTTCAGCATTTGGAT
CAGATAAGGAACCTTCAACGACCAACTGATGTTCCAGAGAGCGGGTTACTCTGTGATCTT
CTCTGGTCAGATCCTAGTAAAGATGTTAAAGGGTGGGGAATGAATGACCGGGGAGTTTCT
CACACCTTTGGCTCTGATAAGGTCACAGAGTTTCTCCAGAAGCAAGATCTTGATCTTATT
TGTCGTGCCCACCAGGTTGTGGAAGATGGATATGAGTTTTTTGCTGATAGACAACTTGTG
ACGATTTTTTCAGCCCCTAATTATTGTGGCGAGTTTGACAATGCTGGTGCTATGATGAGT
GTGGATGAGACTCTGATGTGTTCTTTTCAGATATTAAAGCCTGCAGAGAAGAAGCCAAAG
TTCGGATTTGGGAGCACTACTACGGCCAAAAATGCAACTCCAGCAAAAACGAAGGTCATT
TCTTGGTAA