Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041982
CDS Infomation

pacid=37453885 polypeptide=PGSC0003DMP400028450 locus=PGSC0003DMG400016283 ID=PGSC0003DMT400041982.v4.03 annot-version=v4.03
Sequence

ATGAATGATTTGATGACAAAATCTTTCACAAGCTACATTGATCTGAAGAAAGCCGCCATG
AAAGATGTTGAAGCTAGTCCAGATTTGGAAATGGGTATGACCCAATTGGATCAAAATCTC
ACTGCTTTCTTAGAAGAAGCAGAAAAGGTGAAATTGGAGATGAATTCAATCAAGGAGATT
CTTCGTCGGTTACAGGACACTAATGAAGAAAGCAAGTCGCTACACAAACCTGAAGCTTTG
AAATCGATGCGTGATAGCATAAATTCAGATATTGTAGCTGTGTTGAAGAAGGCTAGAGCT
ATTAGATCTCAGCTGGAAGAGATGGACCGATCCAATGCGATTAACAGGCGGCTTTCTGGG
TGTAAAGAAGGGACATTGGTCGATAGGACTCGATCTGCTGTAACTAATGGGCTTAGGAAG
AAGCTTAAGGAACTTATGATGGAGTTTCAGGGACTGAGGCAGAGGATGATGACTGAGTAT
AAGGAGACTGTTGGAAGAAGATATTTTACTGTTACTGGTGAACACCCAGATGAAGAAGTT
ATTGACAAGATCATTTCTAGTGGAAATGGTCAAGGTGGTGAAGAATTTCTTTCTAGAGCA
ATTCAGGAGCATGGGAGGGGGAAGGTGTTGGAAACAGTGGTGGAGATACAGGACCGTCAT
GACGCAGCAAAGGAGATAGAAAGGAGCTTGCTTGAGCTGCACCAGATATTCTTGGACATG
GCAGTGATGGTTGAGGCACAAGGAGAGAAAATGGATGATATTGAACACCATGTGGTGAAT
GCAGCCCATTATGTTAATGATGGAGCCAAGAACCTCAAGACTGCAAAGAAGTATCAAAAG
AGCAGCAGGAAATGTATGTTCATTGGAGTTATAGTTCTCCTAATTCTGATCCTGGTAGTC
ATCATCCCCATTGCCACCAGTTTCACCAAATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028450
PEP Infomation

pacid=37453885 transcript=PGSC0003DMT400041982 locus=PGSC0003DMG400016283 ID=PGSC0003DMT400041982.v4.03 annot-version=v4.03
Sequence

MNDLMTKSFTSYIDLKKAAMKDVEASPDLEMGMTQLDQNLTAFLEEAEKVKLEMNSIKEI
LRRLQDTNEESKSLHKPEALKSMRDSINSDIVAVLKKARAIRSQLEEMDRSNAINRRLSG
CKEGTLVDRTRSAVTNGLRKKLKELMMEFQGLRQRMMTEYKETVGRRYFTVTGEHPDEEV
IDKIISSGNGQGGEEFLSRAIQEHGRGKVLETVVEIQDRHDAAKEIERSLLELHQIFLDM
AVMVEAQGEKMDDIEHHVVNAAHYVNDGAKNLKTAKKYQKSSRKCMFIGVIVLLILILVV
IIPIATSFTKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400041982
Transcript Infomation

pacid=37453885 locus=PGSC0003DMG400016283 ID=PGSC0003DMT400041982.v4.03 annot-version=v4.03
Sequence

ATGAATGATTTGATGACAAAATCTTTCACAAGCTACATTGATCTGAAGAAAGCCGCCATG
AAAGATGTTGAAGCTAGTCCAGATTTGGAAATGGGTATGACCCAATTGGATCAAAATCTC
ACTGCTTTCTTAGAAGAAGCAGAAAAGGTGAAATTGGAGATGAATTCAATCAAGGAGATT
CTTCGTCGGTTACAGGACACTAATGAAGAAAGCAAGTCGCTACACAAACCTGAAGCTTTG
AAATCGATGCGTGATAGCATAAATTCAGATATTGTAGCTGTGTTGAAGAAGGCTAGAGCT
ATTAGATCTCAGCTGGAAGAGATGGACCGATCCAATGCGATTAACAGGCGGCTTTCTGGG
TGTAAAGAAGGGACATTGGTCGATAGGACTCGATCTGCTGTAACTAATGGGCTTAGGAAG
AAGCTTAAGGAACTTATGATGGAGTTTCAGGGACTGAGGCAGAGGATGATGACTGAGTAT
AAGGAGACTGTTGGAAGAAGATATTTTACTGTTACTGGTGAACACCCAGATGAAGAAGTT
ATTGACAAGATCATTTCTAGTGGAAATGGTCAAGGTGGTGAAGAATTTCTTTCTAGAGCA
ATTCAGGAGCATGGGAGGGGGAAGGTGTTGGAAACAGTGGTGGAGATACAGGACCGTCAT
GACGCAGCAAAGGAGATAGAAAGGAGCTTGCTTGAGCTGCACCAGATATTCTTGGACATG
GCAGTGATGGTTGAGGCACAAGGAGAGAAAATGGATGATATTGAACACCATGTGGTGAAT
GCAGCCCATTATGTTAATGATGGAGCCAAGAACCTCAAGACTGCAAAGAAGTATCAAAAG
AGCAGCAGGAAATGTATGTTCATTGGAGTTATAGTTCTCCTAATTCTGATCCTGGTAGTC
ATCATCCCCATTGCCACCAGTTTCACCAAATCTTGA