Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041979
CDS Infomation

pacid=37450468 polypeptide=PGSC0003DMP400028447 locus=PGSC0003DMG400016281 ID=PGSC0003DMT400041979.v4.03 annot-version=v4.03
Sequence

ATGGCACAAGACACGGGAATGTTTACAGTGCATCATACAATTGGAAATGTTTTATGCTGC
AAATGTGGTATAAGTATGCAACCAAATGCTGCTAATATGTGTGCCAACTGCTTGAGGTCT
GAAATTGACATAACAGAAGGTCTCCAGAAGCATGTTATCATATGCCATTGCCCTGAATGT
GATAGCTATTTGCAACCTCCAAGGACTTGGATTAAAGCTCAATTAGAATCAAAGGAGCTA
TTGACATTCTGTGTGAAGAGGTTGAAGAATTTGAATAAAGTCCGTTTAGTGCAGGCAGAG
TTCATTTGGACTGAACCTCACTCCAAGAGAATCAAAGTCAAGTTGAAGGTTCAGAAAGAG
GTTCTTCACGGAGCTATCCTTGAGCAGGCCTACACAGTTGAATTTGTTATCCAAGACCAA
ATGTGTGAAGCTTGTACGAGGGTTCAGGCGAATCCTGATCAGTGGGTGGCTGCAGTACAA
CTAAGGCAGCACGTTACTCACAGGCGAACTTTCTTCTATTTGGAACAGCTTATTCTTAAG
CATGATGCTGCTTCTCGTGCTATAATGATTAAGCAAATGGATCAAGGAATTGATATGTTT
TTCTCTAATCGGAGTCATGCTGTAAAATTTGTGGAGTTCATAGGAAAAGTTGTTCCCAGT
CGGAGCCGTAATGACAAACAACTAGTGTCTCATGATTCCAAGAACAACAATTACAACTAT
AAGTATACTTTTTCAGTTGAAATTTCCCCAGTTTGTCGTGAGGACTTGATTTGTCTTCCG
CCAAAAGTTTCAAATAGTTTGGGGAATCTAGGGCCACTTGTGATTTGCACCAAGGTGAGT
AACCACATTGCTTTACTTGACCCATTTACTCTCAGGAACTGTTTTCTGGATGCGGAACAA
TACTGGAGGGCGTCTTTTAAGTCACTACTTTCTAGTAGGCTGCTTGTGGAATATATTGTT
CTAGATGTTGAGGCTGTTTCTACTGAGGTCAATATTGGTGGATCTAAGTATGCTTTGGCA
GACGCCCAAGTAGCTCGTATATCTGATTTTGGAAAGAATGACACAATTTTCAATGTACGA
ACACATCTGGGGCATCTTCTAAACCCTGGGGATTATGCACTTGGGTATGACTTATATGCT
ACTAATAGTAATGATAGTGAGCTTGATAAGTATAAAGGTTTTGTTCTCCCAGATGTAATA
CTGGTTAAGAAGAGCTATGAAGAGAAATGGCAGAAGAAGCGTGGGAAGCCTCGTTCATGG
AAGCTGAAATCTCTCAATATGGAGATTGATGACAATGTGAAGGGTAGAGATCATGAAGAG
AAGATGAACTCTGAGTATGAACAATTCTTAAGAGATTTAGAGGAGAATCCAGATTTGAGG
TTCAACATATCACTTTATCGTAACAAGGAGTATCAGCCATCAGAAATGGCATCTGTGACT
GATGGCGATGATGCTCCTTCTGTCCCATTGGAAGAATTGTTAGCTGATCTTGATTTAAGT
GAGGCGGAAGTTGACAATGATAGCATGAGGGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028447
PEP Infomation

pacid=37450468 transcript=PGSC0003DMT400041979 locus=PGSC0003DMG400016281 ID=PGSC0003DMT400041979.v4.03 annot-version=v4.03
Sequence

MAQDTGMFTVHHTIGNVLCCKCGISMQPNAANMCANCLRSEIDITEGLQKHVIICHCPEC
DSYLQPPRTWIKAQLESKELLTFCVKRLKNLNKVRLVQAEFIWTEPHSKRIKVKLKVQKE
VLHGAILEQAYTVEFVIQDQMCEACTRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILK
HDAASRAIMIKQMDQGIDMFFSNRSHAVKFVEFIGKVVPSRSRNDKQLVSHDSKNNNYNY
KYTFSVEISPVCREDLICLPPKVSNSLGNLGPLVICTKVSNHIALLDPFTLRNCFLDAEQ
YWRASFKSLLSSRLLVEYIVLDVEAVSTEVNIGGSKYALADAQVARISDFGKNDTIFNVR
THLGHLLNPGDYALGYDLYATNSNDSELDKYKGFVLPDVILVKKSYEEKWQKKRGKPRSW
KLKSLNMEIDDNVKGRDHEEKMNSEYEQFLRDLEENPDLRFNISLYRNKEYQPSEMASVT
DGDDAPSVPLEELLADLDLSEAEVDNDSMRE*

Transcript Sequence

Transcript ID

PGSC0003DMT400041979
Transcript Infomation

pacid=37450468 locus=PGSC0003DMG400016281 ID=PGSC0003DMT400041979.v4.03 annot-version=v4.03
Sequence

ATGGCACAAGACACGGGAATGTTTACAGTGCATCATACAATTGGAAATGTTTTATGCTGC
AAATGTGGTATAAGTATGCAACCAAATGCTGCTAATATGTGTGCCAACTGCTTGAGGTCT
GAAATTGACATAACAGAAGGTCTCCAGAAGCATGTTATCATATGCCATTGCCCTGAATGT
GATAGCTATTTGCAACCTCCAAGGACTTGGATTAAAGCTCAATTAGAATCAAAGGAGCTA
TTGACATTCTGTGTGAAGAGGTTGAAGAATTTGAATAAAGTCCGTTTAGTGCAGGCAGAG
TTCATTTGGACTGAACCTCACTCCAAGAGAATCAAAGTCAAGTTGAAGGTTCAGAAAGAG
GTTCTTCACGGAGCTATCCTTGAGCAGGCCTACACAGTTGAATTTGTTATCCAAGACCAA
ATGTGTGAAGCTTGTACGAGGGTTCAGGCGAATCCTGATCAGTGGGTGGCTGCAGTACAA
CTAAGGCAGCACGTTACTCACAGGCGAACTTTCTTCTATTTGGAACAGCTTATTCTTAAG
CATGATGCTGCTTCTCGTGCTATAATGATTAAGCAAATGGATCAAGGAATTGATATGTTT
TTCTCTAATCGGAGTCATGCTGTAAAATTTGTGGAGTTCATAGGAAAAGTTGTTCCCAGT
CGGAGCCGTAATGACAAACAACTAGTGTCTCATGATTCCAAGAACAACAATTACAACTAT
AAGTATACTTTTTCAGTTGAAATTTCCCCAGTTTGTCGTGAGGACTTGATTTGTCTTCCG
CCAAAAGTTTCAAATAGTTTGGGGAATCTAGGGCCACTTGTGATTTGCACCAAGGTGAGT
AACCACATTGCTTTACTTGACCCATTTACTCTCAGGAACTGTTTTCTGGATGCGGAACAA
TACTGGAGGGCGTCTTTTAAGTCACTACTTTCTAGTAGGCTGCTTGTGGAATATATTGTT
CTAGATGTTGAGGCTGTTTCTACTGAGGTCAATATTGGTGGATCTAAGTATGCTTTGGCA
GACGCCCAAGTAGCTCGTATATCTGATTTTGGAAAGAATGACACAATTTTCAATGTACGA
ACACATCTGGGGCATCTTCTAAACCCTGGGGATTATGCACTTGGGTATGACTTATATGCT
ACTAATAGTAATGATAGTGAGCTTGATAAGTATAAAGGTTTTGTTCTCCCAGATGTAATA
CTGGTTAAGAAGAGCTATGAAGAGAAATGGCAGAAGAAGCGTGGGAAGCCTCGTTCATGG
AAGCTGAAATCTCTCAATATGGAGATTGATGACAATGTGAAGGGTAGAGATCATGAAGAG
AAGATGAACTCTGAGTATGAACAATTCTTAAGAGATTTAGAGGAGAATCCAGATTTGAGG
TTCAACATATCACTTTATCGTAACAAGGAGTATCAGCCATCAGAAATGGCATCTGTGACT
GATGGCGATGATGCTCCTTCTGTCCCATTGGAAGAATTGTTAGCTGATCTTGATTTAAGT
GAGGCGGAAGTTGACAATGATAGCATGAGGGAGTGA