Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041887
CDS Infomation

pacid=37465790 polypeptide=PGSC0003DMP400028390 locus=PGSC0003DMG400016253 ID=PGSC0003DMT400041887.v4.03 annot-version=v4.03
Sequence

ATGTTGACAGATTATTTCTCTTGTCTGTTACCGGGTCGGAGCTCCGATTCCGGTGATAGT
GTTGTTGCTGATAGAAACCCGGTTTTGTTGGTATCGGGTCTTGCCGGGTCCATTCTCCAT
TCTAAGAGTAAGAAATTTGGCAGTTTCGAGACCCGAGTTTGGGTCCGACTTCTCCTAGCT
GAACATGAGTTCAAAAAAAAGTTATGGTCAATTTACAATCCAAAAACAGGGTATACAGAG
GCATTGGATGATAGCACAGAGATAGTAGTCCCACAAGATGATTATGGACTCTATGCAATT
GACATTTTGGATCCTTCACTGATGGTTAAGTGTGTACACTTGACCGGTGTATACCATTTT
CATGATATGATTGATATGCTTGTCAAATGTGGATATAAAAAGGGAACTACGTTGTTTGGT
TTTGGTTATGACTTCCGCCAAAGTAATAGGATTGACAAGGCAATGAATGACCTGAAAGAA
AAGTTGGCAGCAGCTTATAAAGCTTCTGGGGGAAGAAAAGTCGATATTATTTCGCATTCC
ATGGGTGGATTGTTAATCAAATGTTTCATTTCTCTTTATAGTGATGTATTTTCCAAGTAT
GTGAATAAGTGGATTACCATTGCCACCCCCTTTCAAGGTGCTCCTGGATGCATTAATGAT
TCTCTTTTAACTGGAGTGCAGTTCGTTGATGGATTTGAAAGCAACTTTTTTGTGTCAAGG
TGGACAATGCATCAATTGGTAAGCCTCTCTTGGTTAGGAAACTTGTGCAAGTCCCCCTAT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400028390
PEP Infomation

pacid=37465790 transcript=PGSC0003DMT400041887 locus=PGSC0003DMG400016253 ID=PGSC0003DMT400041887.v4.03 annot-version=v4.03
Sequence

MLTDYFSCLLPGRSSDSGDSVVADRNPVLLVSGLAGSILHSKSKKFGSFETRVWVRLLLA
EHEFKKKLWSIYNPKTGYTEALDDSTEIVVPQDDYGLYAIDILDPSLMVKCVHLTGVYHF
HDMIDMLVKCGYKKGTTLFGFGYDFRQSNRIDKAMNDLKEKLAAAYKASGGRKVDIISHS
MGGLLIKCFISLYSDVFSKYVNKWITIATPFQGAPGCINDSLLTGVQFVDGFESNFFVSR
WTMHQLVSLSWLGNLCKSPY*

Transcript Sequence

Transcript ID

PGSC0003DMT400041887
Transcript Infomation

pacid=37465790 locus=PGSC0003DMG400016253 ID=PGSC0003DMT400041887.v4.03 annot-version=v4.03
Sequence

ATGTTGACAGATTATTTCTCTTGTCTGTTACCGGGTCGGAGCTCCGATTCCGGTGATAGT
GTTGTTGCTGATAGAAACCCGGTTTTGTTGGTATCGGGTCTTGCCGGGTCCATTCTCCAT
TCTAAGAGTAAGAAATTTGGCAGTTTCGAGACCCGAGTTTGGGTCCGACTTCTCCTAGCT
GAACATGAGTTCAAAAAAAAGTTATGGTCAATTTACAATCCAAAAACAGGGTATACAGAG
GCATTGGATGATAGCACAGAGATAGTAGTCCCACAAGATGATTATGGACTCTATGCAATT
GACATTTTGGATCCTTCACTGATGGTTAAGTGTGTACACTTGACCGGTGTATACCATTTT
CATGATATGATTGATATGCTTGTCAAATGTGGATATAAAAAGGGAACTACGTTGTTTGGT
TTTGGTTATGACTTCCGCCAAAGTAATAGGATTGACAAGGCAATGAATGACCTGAAAGAA
AAGTTGGCAGCAGCTTATAAAGCTTCTGGGGGAAGAAAAGTCGATATTATTTCGCATTCC
ATGGGTGGATTGTTAATCAAATGTTTCATTTCTCTTTATAGTGATGTATTTTCCAAGTAT
GTGAATAAGTGGATTACCATTGCCACCCCCTTTCAAGGTGCTCCTGGATGCATTAATGAT
TCTCTTTTAACTGGAGTGCAGTTCGTTGATGGATTTGAAAGCAACTTTTTTGTGTCAAGG
TGGACAATGCATCAATTGGTAAGCCTCTCTTGGTTAGGAAACTTGTGCAAGTCCCCCTAT
TAA