Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041871
CDS Infomation

pacid=37467365 polypeptide=PGSC0003DMP400028381 locus=PGSC0003DMG402016246 ID=PGSC0003DMT400041871.v4.03 annot-version=v4.03
Sequence

ATGAGCTGCAGAACGACGACGTTTTGGACTCGGATACTCCGCAATCAACTGCGGTTCACC
AGTAGTAAGCCACCATCTTCCGCCGCCGGCGCAGCGAAGGAACCATTTTTCCGGCACCCA
TTTCCGCCGCATTCCGTACAAACTCCTCGTTTCTTCTCTACGGCGTCCTACAACCGGACA
CCGTCAGCGGAGAGGGTAATTCAAGAGCTGTTACTTGACGTGGAAAGGGACAAGCAAAGA
GAAAAGGAAGAAAGAAAGAAGAAAGGATTAGATACAGCTGATATTGATGCTGAGGAGAAT
GAGGATTCCATGGGTGTTGGTCCATTAATTGAGAAGCTTGAGAAGAAGAAGCTCAAGGAG
GAAAAGTTTAGCTTTGAGCCTACGGATTCGGATTCGGAAGATGATGATGAGAGGTGGACT
CCTGATGCTATTAACAAAAAATGGGAAGTTTTTGATAAGAAGTTTAAACGACATGAAGAG
CTTCTCAAGAACTTCACTGATGCAGAGACACTTGATGATGCATACAAATGGATGAATAGA
ATTGACAAGTTTGAGCAAAAGCATTTCCGGCTGAGACCAGAGTATCGGGTGATTGGTGAA
CTGATGAACCGCCTTAAAGTGTCTGAGGGTAAGGAAAAATTTCTTCTGCAGCAGAAGGTG
AATAGGGCCATGCGAATGGTGCAGTGGAGGGAAGCTTATGATCCCAACGACCCAGAGAAT
TACGGACTTATTCAACATCAGCAGGTGGGACCCTCTGTAGATCTTTTAGAACATGCTGGG
TTTGAAAAGGAAAAGGGGATGATTCAAGGAGGAGATGATGACGACGACATAGAGTTTGAT
GACATGAAAGAGAAGGATGATATATTGTTAGAGAAGCTCAATGCCATTGACAGGAAACTT
GAAGAAAAGCTGGCTGAATTGGACCACACCTTTGGGAAAAAGGGTAAGCTTTTAGAAGAG
GAAATCAGAGATCTTGCTGAAGAGAGGAACTCGTTGACAGAGAAGAAAAGAAGACCTCAG
TACAGAAAAGGTTTTGATGTGAAACTCATTAATGTCAATAGGACATGTAAGGTTACTAAG
GGGGGACAAGTTGTCAAGTATACTGCTTTGTTGGCTTGTGGGAACTATCACGGAGTTGTT
GGTTTTGCAAAAGCAAAAGGTCCAGCTATTCCCATTGCCCTGCAAAAGGCATATGAGAAA
TGCTTCCAGAACCTACATTATGTTGAACGGCATGAGGAACATACAATCTCACATGCAGTT
CAAACAAACTACAAAAAGACTAAGGTATATCTGTGGCCTGCTCCTACTCAAACAGGGATG
AAAGCAGGTAGAACTGTCCAAACAATTTTGCATCTAGCGGGTTTCAGGAATGTGAAATCG
AAGGTTGTTGGCTCAAGGAACCCACATAACACAGTTAAGGCTCTCTTCAAAGCTCTAAAT
GCGATTGAGACACCCAAGGATGTCGAAGAAAAGTTTGGGCGAACTGTTGTCGAGTCATAC
TTATTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028381
PEP Infomation

pacid=37467365 transcript=PGSC0003DMT400041871 locus=PGSC0003DMG402016246 ID=PGSC0003DMT400041871.v4.03 annot-version=v4.03
Sequence

MSCRTTTFWTRILRNQLRFTSSKPPSSAAGAAKEPFFRHPFPPHSVQTPRFFSTASYNRT
PSAERVIQELLLDVERDKQREKEERKKKGLDTADIDAEENEDSMGVGPLIEKLEKKKLKE
EKFSFEPTDSDSEDDDERWTPDAINKKWEVFDKKFKRHEELLKNFTDAETLDDAYKWMNR
IDKFEQKHFRLRPEYRVIGELMNRLKVSEGKEKFLLQQKVNRAMRMVQWREAYDPNDPEN
YGLIQHQQVGPSVDLLEHAGFEKEKGMIQGGDDDDDIEFDDMKEKDDILLEKLNAIDRKL
EEKLAELDHTFGKKGKLLEEEIRDLAEERNSLTEKKRRPQYRKGFDVKLINVNRTCKVTK
GGQVVKYTALLACGNYHGVVGFAKAKGPAIPIALQKAYEKCFQNLHYVERHEEHTISHAV
QTNYKKTKVYLWPAPTQTGMKAGRTVQTILHLAGFRNVKSKVVGSRNPHNTVKALFKALN
AIETPKDVEEKFGRTVVESYLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400041871
Transcript Infomation

pacid=37467365 locus=PGSC0003DMG402016246 ID=PGSC0003DMT400041871.v4.03 annot-version=v4.03
Sequence

ATGAGCTGCAGAACGACGACGTTTTGGACTCGGATACTCCGCAATCAACTGCGGTTCACC
AGTAGTAAGCCACCATCTTCCGCCGCCGGCGCAGCGAAGGAACCATTTTTCCGGCACCCA
TTTCCGCCGCATTCCGTACAAACTCCTCGTTTCTTCTCTACGGCGTCCTACAACCGGACA
CCGTCAGCGGAGAGGGTAATTCAAGAGCTGTTACTTGACGTGGAAAGGGACAAGCAAAGA
GAAAAGGAAGAAAGAAAGAAGAAAGGATTAGATACAGCTGATATTGATGCTGAGGAGAAT
GAGGATTCCATGGGTGTTGGTCCATTAATTGAGAAGCTTGAGAAGAAGAAGCTCAAGGAG
GAAAAGTTTAGCTTTGAGCCTACGGATTCGGATTCGGAAGATGATGATGAGAGGTGGACT
CCTGATGCTATTAACAAAAAATGGGAAGTTTTTGATAAGAAGTTTAAACGACATGAAGAG
CTTCTCAAGAACTTCACTGATGCAGAGACACTTGATGATGCATACAAATGGATGAATAGA
ATTGACAAGTTTGAGCAAAAGCATTTCCGGCTGAGACCAGAGTATCGGGTGATTGGTGAA
CTGATGAACCGCCTTAAAGTGTCTGAGGGTAAGGAAAAATTTCTTCTGCAGCAGAAGGTG
AATAGGGCCATGCGAATGGTGCAGTGGAGGGAAGCTTATGATCCCAACGACCCAGAGAAT
TACGGACTTATTCAACATCAGCAGGTGGGACCCTCTGTAGATCTTTTAGAACATGCTGGG
TTTGAAAAGGAAAAGGGGATGATTCAAGGAGGAGATGATGACGACGACATAGAGTTTGAT
GACATGAAAGAGAAGGATGATATATTGTTAGAGAAGCTCAATGCCATTGACAGGAAACTT
GAAGAAAAGCTGGCTGAATTGGACCACACCTTTGGGAAAAAGGGTAAGCTTTTAGAAGAG
GAAATCAGAGATCTTGCTGAAGAGAGGAACTCGTTGACAGAGAAGAAAAGAAGACCTCAG
TACAGAAAAGGTTTTGATGTGAAACTCATTAATGTCAATAGGACATGTAAGGTTACTAAG
GGGGGACAAGTTGTCAAGTATACTGCTTTGTTGGCTTGTGGGAACTATCACGGAGTTGTT
GGTTTTGCAAAAGCAAAAGGTCCAGCTATTCCCATTGCCCTGCAAAAGGCATATGAGAAA
TGCTTCCAGAACCTACATTATGTTGAACGGCATGAGGAACATACAATCTCACATGCAGTT
CAAACAAACTACAAAAAGACTAAGGTATATCTGTGGCCTGCTCCTACTCAAACAGGGATG
AAAGCAGGTAGAACTGTCCAAACAATTTTGCATCTAGCGGGTTTCAGGAATGTGAAATCG
AAGGTTGTTGGCTCAAGGAACCCACATAACACAGTTAAGGCTCTCTTCAAAGCTCTAAAT
GCGATTGAGACACCCAAGGATGTCGAAGAAAAGTTTGGGCGAACTGTTGTCGAGTCATAC
TTATTGTAA