Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041856
CDS Infomation

pacid=37467206 polypeptide=PGSC0003DMP400028368 locus=PGSC0003DMG400016242 ID=PGSC0003DMT400041856.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGACGGCGACGGCGACAGCGGCGGTGTCGAAAATTCCATCGACAGGGCTGAGG
AAGAAGAGTTTGTTACCAGCATTGATTAAACCAGCTTCGCCGGGAAGAACCAGTAGCCGG
AATTTCAATTTCGGTTTAAAAAAGTTTTCACCGGTAAATGTTATAGCGAGCAGTAATGGA
AGTGGTAGTACTGATAATGGCGCTGTTTCTGTTACACGTACTGCTCCATTAACTCCTCCT
AAGCCTTCTAGCTCTCGGGTGAAAAGTCACACCATTTCAGTATTTGTTGGGGATGAAAGT
GGCATAATCAATAGAATTGCTGGAGTTTTTGCTCGAAGGGGTTACAATATTGAGTCACTT
GCTGTTGGTTTGAACAAGGATAAAGCTCTTTTTACCATAGTGGTCTCTGGAACTGAGAAG
GTCTTGCAACAAGTTGTAGAGCAGCTCAATAAGCTTGTGAATGTCTGGAAGGTGGAGGAT
CTGTCAAGAGAACCACAAGTGGAACGAGAATTGATGCTCATAAAACTGAATGCAGACGCA
ACCACAAAAGCTGAAATCATGTGGTTGGTGGACATCTTCAGAGGAAAAATTGTGGATATA
TCAGAACACTTTCTGACTATTGAGGTAACTGGTGATCCAGGGAAAATGGCTGCCGTTCTG
AGAAATTTAAGCAAGTTTGGGATTAGCGAACTAGCCCGAACTGGGAAGATTGCTTTGAGA
CGAGAAAAGATGGGTGAGGATGCTCCTTTTTGGAGGTTTTCTGCAGCTTCTTATCCAGAT
CTCGAAGAAAAACTTCCCCGTATCCTGAACAACAAAAGTCGACCAATTGACAATGGAGCC
AGGAATGATCCAGGGGGTGATGTTTATCCTGTGGAATCCAGTAATGAAATCTCAGTTAAT
CAAATTCTCGATGCCCACTGGGGATATCTGTATGATGGAGATTTGTCTGGGATTCGATCA
CACACATTAAGCATGCTTGTCAACAATGCTCCAGGGGTCCTAAATTTGATAAGTGGTGTT
ATATCTCGACGAGGGTATAATGTTCAGAGTCTTGCTGTAGGCCCTGCAGAGACAGAGGGG
CTTTCACGTATTACCACAGTGGTCCCTGGAACTGATGAAACTATAGGGAAATTGGTCAAG
CAATTTAACAAGTTGATAGATGTTCATGAGGTTCAAGATATAACTCATTTACCATTTGCT
GAGCGGGAGCTAATGCTCATTAAAGTAGCCGCCAATGCAGCAGCAAGGAGGGATGTCCTT
GATATTGCCAGTATTTTCCGTGCTAAACCTGTTGATGTGTCTGATCATACAGTAACATTG
GAGTTGACTGGAGACTTCAACAAGCTGTTGGCATTGCAAAGATTACTGGAACCTTATGGC
ATTTGTGAGGTGGCTCGTACAGGGCGGGTAGCATTGGTACGAGAATCTGGTGTGGACTCG
ACATACCTCCGGGGTTATGCTCTTCCTCAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400028368
PEP Infomation

pacid=37467206 transcript=PGSC0003DMT400041856 locus=PGSC0003DMG400016242 ID=PGSC0003DMT400041856.v4.03 annot-version=v4.03
Sequence

MAATATATAAVSKIPSTGLRKKSLLPALIKPASPGRTSSRNFNFGLKKFSPVNVIASSNG
SGSTDNGAVSVTRTAPLTPPKPSSSRVKSHTISVFVGDESGIINRIAGVFARRGYNIESL
AVGLNKDKALFTIVVSGTEKVLQQVVEQLNKLVNVWKVEDLSREPQVERELMLIKLNADA
TTKAEIMWLVDIFRGKIVDISEHFLTIEVTGDPGKMAAVLRNLSKFGISELARTGKIALR
REKMGEDAPFWRFSAASYPDLEEKLPRILNNKSRPIDNGARNDPGGDVYPVESSNEISVN
QILDAHWGYLYDGDLSGIRSHTLSMLVNNAPGVLNLISGVISRRGYNVQSLAVGPAETEG
LSRITTVVPGTDETIGKLVKQFNKLIDVHEVQDITHLPFAERELMLIKVAANAAARRDVL
DIASIFRAKPVDVSDHTVTLELTGDFNKLLALQRLLEPYGICEVARTGRVALVRESGVDS
TYLRGYALPQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400041856
Transcript Infomation

pacid=37467206 locus=PGSC0003DMG400016242 ID=PGSC0003DMT400041856.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGACGGCGACGGCGACAGCGGCGGTGTCGAAAATTCCATCGACAGGGCTGAGG
AAGAAGAGTTTGTTACCAGCATTGATTAAACCAGCTTCGCCGGGAAGAACCAGTAGCCGG
AATTTCAATTTCGGTTTAAAAAAGTTTTCACCGGTAAATGTTATAGCGAGCAGTAATGGA
AGTGGTAGTACTGATAATGGCGCTGTTTCTGTTACACGTACTGCTCCATTAACTCCTCCT
AAGCCTTCTAGCTCTCGGGTGAAAAGTCACACCATTTCAGTATTTGTTGGGGATGAAAGT
GGCATAATCAATAGAATTGCTGGAGTTTTTGCTCGAAGGGGTTACAATATTGAGTCACTT
GCTGTTGGTTTGAACAAGGATAAAGCTCTTTTTACCATAGTGGTCTCTGGAACTGAGAAG
GTCTTGCAACAAGTTGTAGAGCAGCTCAATAAGCTTGTGAATGTCTGGAAGGTGGAGGAT
CTGTCAAGAGAACCACAAGTGGAACGAGAATTGATGCTCATAAAACTGAATGCAGACGCA
ACCACAAAAGCTGAAATCATGTGGTTGGTGGACATCTTCAGAGGAAAAATTGTGGATATA
TCAGAACACTTTCTGACTATTGAGGTAACTGGTGATCCAGGGAAAATGGCTGCCGTTCTG
AGAAATTTAAGCAAGTTTGGGATTAGCGAACTAGCCCGAACTGGGAAGATTGCTTTGAGA
CGAGAAAAGATGGGTGAGGATGCTCCTTTTTGGAGGTTTTCTGCAGCTTCTTATCCAGAT
CTCGAAGAAAAACTTCCCCGTATCCTGAACAACAAAAGTCGACCAATTGACAATGGAGCC
AGGAATGATCCAGGGGGTGATGTTTATCCTGTGGAATCCAGTAATGAAATCTCAGTTAAT
CAAATTCTCGATGCCCACTGGGGATATCTGTATGATGGAGATTTGTCTGGGATTCGATCA
CACACATTAAGCATGCTTGTCAACAATGCTCCAGGGGTCCTAAATTTGATAAGTGGTGTT
ATATCTCGACGAGGGTATAATGTTCAGAGTCTTGCTGTAGGCCCTGCAGAGACAGAGGGG
CTTTCACGTATTACCACAGTGGTCCCTGGAACTGATGAAACTATAGGGAAATTGGTCAAG
CAATTTAACAAGTTGATAGATGTTCATGAGGTTCAAGATATAACTCATTTACCATTTGCT
GAGCGGGAGCTAATGCTCATTAAAGTAGCCGCCAATGCAGCAGCAAGGAGGGATGTCCTT
GATATTGCCAGTATTTTCCGTGCTAAACCTGTTGATGTGTCTGATCATACAGTAACATTG
GAGTTGACTGGAGACTTCAACAAGCTGTTGGCATTGCAAAGATTACTGGAACCTTATGGC
ATTTGTGAGGTGGCTCGTACAGGGCGGGTAGCATTGGTACGAGAATCTGGTGTGGACTCG
ACATACCTCCGGGGTTATGCTCTTCCTCAATAG