Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041847
CDS Infomation

pacid=37465314 polypeptide=PGSC0003DMP400028361 locus=PGSC0003DMG400016238 ID=PGSC0003DMT400041847.v4.03 annot-version=v4.03
Sequence

ATGTTACGAATAGGTTCTACTCTCCGTGCATCACGAAGGCTCTTAAACAGACAGCTCCAC
TTTCAATGCCCTATAATTGCCGGAGATTCTGCAATCGCCGGCATAGCGCCGGTGCGTCAC
CGGAGATTCATACCGTTCAATTACAGTAGTAGTTTTGGAAATATATCTGCTTCGGCCTCA
TTTTTTTCCACGTTGAGTTCAAATAGCTCGATTTTTAATGCACCTAATACTGAGAGAGCT
GAGGAAAATAATAGTGTTGAACCTAATTTATCAGTTGCGGGAGATGCTGGAGTTGCTTTA
TCGGAGGTAGAACGAGTGGCGCCGCGCTTATCTGATGGAATTTTGGATGCTTATTTAGCA
ATTGAGCTAGCATTGGATTCTGTAGTTAAGATATTTACTGTTTCCAGCAGTCCTAATTAC
TTCCTTCCATGGCAGAACAAGTCTCAGCGCGAAACGACGGGCTCTGGTTTTGTTATTCCG
GGAAAGAGAATCCTGACAAATGCTCATGTTGTGGCTGATCATACATTTGTACTTGTACGA
AAGCATGGTTCTCCAACCAAGTATAGAGCAACAGTTCAGGCTGTTGGTCATGAATGTGAC
TTGGCTATTCTGGTGGTAGAAAGTGAAGAATTCTGGGAGGGCATGAACTCTTTGGAGCTT
GGTGATGTTCCATTTCTTCAAGAAGCTGTATCTGTTGTTGGTTATCCTCAAGGGGGAGAC
AATATATCTGTCACAAAAGGTGTCGTCTCAAGGGTTGAACCTACACAATATGTGCATGGG
GCTAGTCAACTATTGGCAATACAAATTGATGCGGCTATAAATCCAGGGAATAGCGGAGGG
CCAGCAATCATGGGTGACAAAGTTGCTGGAGTTGCTTTCCAAAACCTTTCGGGTGCAGAG
AATATTGGCTACATTATTCCTGTTCCTGTGATAAAGCATTTTATAGCTGGCGTAGAAGAA
CGTGGTGAATATGCTGGGTTTTGCTCTCTGGGCTTGTCATGCCAACCTACTGAAAATGCA
CAGATTCGAGAATACTTCCAAATGCAGTCAAAAATGACAGGTGTACTTGTTAGCCGAATC
AATCCACTTTCTGATGCTTGTAGAGTATTAAAGAAAGACGATATAATCCTCTCATTTGAT
GGTGTCCCCATAGCAAGTGATGGAACAGTTCCTTTCCGAAACAGAGAGAGAATCTCATTT
GACCATCTCGTATCTATGAAGAAACCAAATGAAACTGCTGAACTTAAAGTCTTGAGGAAT
GGTGAAGTGCATGACTTCAAGATCACGCTTCATCCTTTGCAACCTCTTGTTCCAGTTCAT
CAATTTGACAAGCTTCCGAGTTATTTCATTTTTGCTGGTCTCGTTTTTATTCCATTAACT
CAACCATTCCTTCACGAGTATGGAGAAGAATGGTATAATACCTCACCCCGTCGGTTGTGT
GAACGGGCACTTCGGGAACTACCTAAGAAACCCGGCGAACAATTCATCATCCTTTCACAG
GTGTTGATGGATGATATTAATGCTGGTTATGAGCGTCTTGCTGAGTTACAGGTGAAGAAG
GTTAACGGTGTAGAAGTTCTGAATCTGAAACATTTACGTCAACTCGTGGAAGATGGTAAC
CAAAAGAACGTGAGATTTGATTTGGATGATGAGAGGGTGATTGTTTTGAACTATGAATCC
GCAAGAATAGCCACATCGCGTATATTGAAACGCCATAGAATACCTCATGCCATGTCTATC
GATCTTACTGATGAGCAAAATGCAGCTGAACTACAGTCAGCTTGCTCAACCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028361
PEP Infomation

pacid=37465314 transcript=PGSC0003DMT400041847 locus=PGSC0003DMG400016238 ID=PGSC0003DMT400041847.v4.03 annot-version=v4.03
Sequence

MLRIGSTLRASRRLLNRQLHFQCPIIAGDSAIAGIAPVRHRRFIPFNYSSSFGNISASAS
FFSTLSSNSSIFNAPNTERAEENNSVEPNLSVAGDAGVALSEVERVAPRLSDGILDAYLA
IELALDSVVKIFTVSSSPNYFLPWQNKSQRETTGSGFVIPGKRILTNAHVVADHTFVLVR
KHGSPTKYRATVQAVGHECDLAILVVESEEFWEGMNSLELGDVPFLQEAVSVVGYPQGGD
NISVTKGVVSRVEPTQYVHGASQLLAIQIDAAINPGNSGGPAIMGDKVAGVAFQNLSGAE
NIGYIIPVPVIKHFIAGVEERGEYAGFCSLGLSCQPTENAQIREYFQMQSKMTGVLVSRI
NPLSDACRVLKKDDIILSFDGVPIASDGTVPFRNRERISFDHLVSMKKPNETAELKVLRN
GEVHDFKITLHPLQPLVPVHQFDKLPSYFIFAGLVFIPLTQPFLHEYGEEWYNTSPRRLC
ERALRELPKKPGEQFIILSQVLMDDINAGYERLAELQVKKVNGVEVLNLKHLRQLVEDGN
QKNVRFDLDDERVIVLNYESARIATSRILKRHRIPHAMSIDLTDEQNAAELQSACST*

Transcript Sequence

Transcript ID

PGSC0003DMT400041847
Transcript Infomation

pacid=37465314 locus=PGSC0003DMG400016238 ID=PGSC0003DMT400041847.v4.03 annot-version=v4.03
Sequence

ATGTTACGAATAGGTTCTACTCTCCGTGCATCACGAAGGCTCTTAAACAGACAGCTCCAC
TTTCAATGCCCTATAATTGCCGGAGATTCTGCAATCGCCGGCATAGCGCCGGTGCGTCAC
CGGAGATTCATACCGTTCAATTACAGTAGTAGTTTTGGAAATATATCTGCTTCGGCCTCA
TTTTTTTCCACGTTGAGTTCAAATAGCTCGATTTTTAATGCACCTAATACTGAGAGAGCT
GAGGAAAATAATAGTGTTGAACCTAATTTATCAGTTGCGGGAGATGCTGGAGTTGCTTTA
TCGGAGGTAGAACGAGTGGCGCCGCGCTTATCTGATGGAATTTTGGATGCTTATTTAGCA
ATTGAGCTAGCATTGGATTCTGTAGTTAAGATATTTACTGTTTCCAGCAGTCCTAATTAC
TTCCTTCCATGGCAGAACAAGTCTCAGCGCGAAACGACGGGCTCTGGTTTTGTTATTCCG
GGAAAGAGAATCCTGACAAATGCTCATGTTGTGGCTGATCATACATTTGTACTTGTACGA
AAGCATGGTTCTCCAACCAAGTATAGAGCAACAGTTCAGGCTGTTGGTCATGAATGTGAC
TTGGCTATTCTGGTGGTAGAAAGTGAAGAATTCTGGGAGGGCATGAACTCTTTGGAGCTT
GGTGATGTTCCATTTCTTCAAGAAGCTGTATCTGTTGTTGGTTATCCTCAAGGGGGAGAC
AATATATCTGTCACAAAAGGTGTCGTCTCAAGGGTTGAACCTACACAATATGTGCATGGG
GCTAGTCAACTATTGGCAATACAAATTGATGCGGCTATAAATCCAGGGAATAGCGGAGGG
CCAGCAATCATGGGTGACAAAGTTGCTGGAGTTGCTTTCCAAAACCTTTCGGGTGCAGAG
AATATTGGCTACATTATTCCTGTTCCTGTGATAAAGCATTTTATAGCTGGCGTAGAAGAA
CGTGGTGAATATGCTGGGTTTTGCTCTCTGGGCTTGTCATGCCAACCTACTGAAAATGCA
CAGATTCGAGAATACTTCCAAATGCAGTCAAAAATGACAGGTGTACTTGTTAGCCGAATC
AATCCACTTTCTGATGCTTGTAGAGTATTAAAGAAAGACGATATAATCCTCTCATTTGAT
GGTGTCCCCATAGCAAGTGATGGAACAGTTCCTTTCCGAAACAGAGAGAGAATCTCATTT
GACCATCTCGTATCTATGAAGAAACCAAATGAAACTGCTGAACTTAAAGTCTTGAGGAAT
GGTGAAGTGCATGACTTCAAGATCACGCTTCATCCTTTGCAACCTCTTGTTCCAGTTCAT
CAATTTGACAAGCTTCCGAGTTATTTCATTTTTGCTGGTCTCGTTTTTATTCCATTAACT
CAACCATTCCTTCACGAGTATGGAGAAGAATGGTATAATACCTCACCCCGTCGGTTGTGT
GAACGGGCACTTCGGGAACTACCTAAGAAACCCGGCGAACAATTCATCATCCTTTCACAG
GTGTTGATGGATGATATTAATGCTGGTTATGAGCGTCTTGCTGAGTTACAGGTGAAGAAG
GTTAACGGTGTAGAAGTTCTGAATCTGAAACATTTACGTCAACTCGTGGAAGATGGTAAC
CAAAAGAACGTGAGATTTGATTTGGATGATGAGAGGGTGATTGTTTTGAACTATGAATCC
GCAAGAATAGCCACATCGCGTATATTGAAACGCCATAGAATACCTCATGCCATGTCTATC
GATCTTACTGATGAGCAAAATGCAGCTGAACTACAGTCAGCTTGCTCAACCTAA