Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041818
CDS Infomation

pacid=37466651 polypeptide=PGSC0003DMP400028340 locus=PGSC0003DMG402016226 ID=PGSC0003DMT400041818.v4.03 annot-version=v4.03
Sequence

ATGGCTTTATCAAACACCTCATCATTGTCATCATCAAAATCCCTTGTTCAATCTCATCTT
CTCCATAACCCTTTACCCCAACCTCGTTTTTCCCTTTTTCCGACCACCCAACATGGGCGG
CGCCACCCCATCTCCGCCGTACATGCGGCGGAGCCATCCAAGACTGCAGTTAAGCAAGGA
AAATGGAGTCTTGATAGCTGGAAAACAAAGAAAGCTTTGCAACTTCCTGCATACCCAGAT
GAGAAAGAACTTGAATCTGTGCTTAAAACACTTGAAATGAATCCACCACTTGTGTTTGCT
GGTGAGGCAAGGAGTTTGGAAGAGAAGCTTGGTGAGGCTGCATTGGGGAAAGCTTTTTTG
TTACAAGGTGGAGATTGTGCTGAGAGTTTTAAGGAATTTAATGCCAATAATATTCGTGAT
ACTTTTAGGATTTTGCTTCAGATGAGTGTTGTTCTTATGTTTGGTGGACAAGTTCCTGTG
ATTAAGGTTGGAAGAATGGCGGGTCAGTTTGCAAAACCAAGATCAGATCCGTTTGAGGAG
ATAAATGGAGTGAAGCTACCAAGTTACAAGGGTGACAATATCAATGGTGATACATTTGAT
GAGAAGTCAAGAATTCCGGATCCTCATAGGCTTATTAGGGCATACATGCAATCTGCTGCG
ACTCTTAATCTTCTTAGAGCTTTTGCTACTGGAGGTTATGCTGCAATGCAGCGGGTCACC
GAATGGAATCTTGATTTTGTGGAGAACTGTGAGCAGGGAGATAGGTATCAGGAACTAGCT
CACAGGGTTGATGAAGCCTTAGGATTCATGGCTGCTGCTGGACTCACAGTTGACCACCCT
ATCATGTCAACAACTGATTTCTGGACATCCCACGAGTGCTTGCTTCTTCCTTATGAACAA
GCACTTACAAGGGAGGATTCAACTTCTGGTCTTTTCTATGATTGTTCTGCTCACATGGTT
TGGGTTGGGGAAAGAACCAGGCAACTAGACGGTGCTCATGTCGAGTTTTTGAGAGGAGTT
GCAAACCCTCTTGGCATAAAGGTGAGTCAAAAAATGGATCCAAATGAGCTAATTAAGCTC
ATTGACATCCTGAACCCTGCCAATAAGCCTGGAAGAATAACTGTAATTGTTAGAATGGGT
GCTGAGAACATGAGAGTGAAACTTTCCCACTTGGTCAGGGCAGTACGAGGAGCTGGTCAG
ATTGTGACATGGGTTTGTGATCCAATGCACGGGAATACCATCAAGGCACCATGTGGACTC
AAAACCCGTGCTTTCGATTCAATCCTGGCTGAGGTCCGAGCTTTCTTCGATGTGCATGAG
CAAGAAGGAAGCCACCCTGGTGGTATTCACCTAGAAATGACGGGGCAAAATGTGACTGAG
TGCATTGGTGGATCACGAACAGTAACCTATGACGATTTGGGCTCTCGCTACCACACTCAT
TGTGATCCAAGATTGAATGCTTCTCAGTCTCTTGAACTTTCCTTCATCGTAGCTGAGAGA
CTAAGAAGACGAAGAATGTCCACTCAACGCCTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028340
PEP Infomation

pacid=37466651 transcript=PGSC0003DMT400041818 locus=PGSC0003DMG402016226 ID=PGSC0003DMT400041818.v4.03 annot-version=v4.03
Sequence

MALSNTSSLSSSKSLVQSHLLHNPLPQPRFSLFPTTQHGRRHPISAVHAAEPSKTAVKQG
KWSLDSWKTKKALQLPAYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFL
LQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPFEE
INGVKLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVT
EWNLDFVENCEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQ
ALTREDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELIKL
IDILNPANKPGRITVIVRMGAENMRVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGL
KTRAFDSILAEVRAFFDVHEQEGSHPGGIHLEMTGQNVTECIGGSRTVTYDDLGSRYHTH
CDPRLNASQSLELSFIVAERLRRRRMSTQRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400041818
Transcript Infomation

pacid=37466651 locus=PGSC0003DMG402016226 ID=PGSC0003DMT400041818.v4.03 annot-version=v4.03
Sequence

ATGGCTTTATCAAACACCTCATCATTGTCATCATCAAAATCCCTTGTTCAATCTCATCTT
CTCCATAACCCTTTACCCCAACCTCGTTTTTCCCTTTTTCCGACCACCCAACATGGGCGG
CGCCACCCCATCTCCGCCGTACATGCGGCGGAGCCATCCAAGACTGCAGTTAAGCAAGGA
AAATGGAGTCTTGATAGCTGGAAAACAAAGAAAGCTTTGCAACTTCCTGCATACCCAGAT
GAGAAAGAACTTGAATCTGTGCTTAAAACACTTGAAATGAATCCACCACTTGTGTTTGCT
GGTGAGGCAAGGAGTTTGGAAGAGAAGCTTGGTGAGGCTGCATTGGGGAAAGCTTTTTTG
TTACAAGGTGGAGATTGTGCTGAGAGTTTTAAGGAATTTAATGCCAATAATATTCGTGAT
ACTTTTAGGATTTTGCTTCAGATGAGTGTTGTTCTTATGTTTGGTGGACAAGTTCCTGTG
ATTAAGGTTGGAAGAATGGCGGGTCAGTTTGCAAAACCAAGATCAGATCCGTTTGAGGAG
ATAAATGGAGTGAAGCTACCAAGTTACAAGGGTGACAATATCAATGGTGATACATTTGAT
GAGAAGTCAAGAATTCCGGATCCTCATAGGCTTATTAGGGCATACATGCAATCTGCTGCG
ACTCTTAATCTTCTTAGAGCTTTTGCTACTGGAGGTTATGCTGCAATGCAGCGGGTCACC
GAATGGAATCTTGATTTTGTGGAGAACTGTGAGCAGGGAGATAGGTATCAGGAACTAGCT
CACAGGGTTGATGAAGCCTTAGGATTCATGGCTGCTGCTGGACTCACAGTTGACCACCCT
ATCATGTCAACAACTGATTTCTGGACATCCCACGAGTGCTTGCTTCTTCCTTATGAACAA
GCACTTACAAGGGAGGATTCAACTTCTGGTCTTTTCTATGATTGTTCTGCTCACATGGTT
TGGGTTGGGGAAAGAACCAGGCAACTAGACGGTGCTCATGTCGAGTTTTTGAGAGGAGTT
GCAAACCCTCTTGGCATAAAGGTGAGTCAAAAAATGGATCCAAATGAGCTAATTAAGCTC
ATTGACATCCTGAACCCTGCCAATAAGCCTGGAAGAATAACTGTAATTGTTAGAATGGGT
GCTGAGAACATGAGAGTGAAACTTTCCCACTTGGTCAGGGCAGTACGAGGAGCTGGTCAG
ATTGTGACATGGGTTTGTGATCCAATGCACGGGAATACCATCAAGGCACCATGTGGACTC
AAAACCCGTGCTTTCGATTCAATCCTGGCTGAGGTCCGAGCTTTCTTCGATGTGCATGAG
CAAGAAGGAAGCCACCCTGGTGGTATTCACCTAGAAATGACGGGGCAAAATGTGACTGAG
TGCATTGGTGGATCACGAACAGTAACCTATGACGATTTGGGCTCTCGCTACCACACTCAT
TGTGATCCAAGATTGAATGCTTCTCAGTCTCTTGAACTTTCCTTCATCGTAGCTGAGAGA
CTAAGAAGACGAAGAATGTCCACTCAACGCCTGTAG