Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041788
CDS Infomation

pacid=37464630 polypeptide=PGSC0003DMP400028316 locus=PGSC0003DMG400016208 ID=PGSC0003DMT400041788.v4.03 annot-version=v4.03
Sequence

ATGGAGTCGCTTTCGCCGGCGATCAGATCAAATCGGATTCGACCGTCGACGACTAATTCC
GGCGAAAATGAGCTACTCATCAGCTCCGTCAAGTGGATAAAGTTGCCGCCGGTAGCTCGC
CGGAAAATGAGAATGAGAGTTGCAGCTCAATCAAGTAATTTCGTCGTCCCTAACAACATC
AATTTCAGCGATCCGGATTGGAAAGTGAAGTATGAGAGAGAATTCGAAGCTCGTTTCAAT
ATTCCTCACATTACTGATGTATTTCCCGACGCCGTTTCGTATCCTTCCACTTTCTGTCTC
AAAATGAGAACTCCAGTCACTGAGGATTTTGCACAAGGATATCCTTCAGATGAAGAATGG
CACGGATACATCAATAACAATGACAGAGTACTTCTTAAAACTATTAATTATTCCTCTCCG
ACTTCTGCTGGTGCTGAGTGCATTGATCCCGATTGTACATGGGTAGAGCAATGGGTTCAT
CGTGCTGGTCCTCGAGAGAAAACATATTTCAAACCAGAGGAGGTGAAAGCAGCAATCATA
ACCTGTGGTGGACTATGCCCAGGTCTTAATGACGTTATTCGACAGATAGTTATCACCCTT
GAGATATACGGTGTGAAGCAAATTGTGGGGATTCCATTTGGGTACCGTGGGTTTTCAAGC
GATGATTTAGCTGAAATGCCATTATCCAGGAAAGTGGTTCAAAATGTTCATCTTTCCGGT
GGAAGCTTGCTAGGCGTATCACGTGGAGGACCTAAAGTTTCCGATATTGTGGATAGCATT
CAGGAAAGAGGAATAAACATGCTCTTTGTGATCGGTGGAAATGGTACACATGCTGGCGCA
AACGCAATTCATGATGAGTGCCGTAGAAGACGTATGCAGGTAGCTGTAGTTGGTGTGCCA
AAAACTATAGACAATGATATTATGCTTATGGACAAAACATTTGGTTTTGATACTGCTGTT
GAAGAAGCACAGAGAGCCATTAATTCTGCTTATATTGAGGCACATAGTGCATATCATGGT
ATCGGAATTGTGAAGTTGATGGGTCGTAGCAGTGGTTTTATAGCTATGCATGCATCACTA
GCTAGTGGACAGATAGACATATGCTTGATTCCAGAGGTGCCTTTTAATCTGCACGGGCCT
CATGGCGTGTTGCAGCATCTAAAATATCTGCTTGAGGCAAAGGGATCAGCTGTGATTTGT
GTAGCAGAGGGAGCAGGGCAGGATTTCCTCGAGAAAACCAATGCAAAGGATGCATCTGGA
AATGCTGTACTTGGAGATATTGGTGTTCATATACAACAACAGATCAAAAAGTACTTCAAG
GAGATTGAGGTTACAACTGATGTTAAATACATTGATCCTACCTACATGATTCGTGCATGC
CGTGCAAATGCATCAGATCGAATTCTCTGTACTGTACTAGGTCAAAATGCTGTTCATGGT
GCATTTGCTGGATATAGCGGGATCACAGTTGGTATATGCAATACTCACTATGTGTACTTT
CCAATTCCAGAAGTCATTGCTCAACCCAAGATCGTGGACCCTAACAGTCGCATGTGGCAT
CGTTGCTTAACATCCACAGGCCAGCCGGACTTTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028316
PEP Infomation

pacid=37464630 transcript=PGSC0003DMT400041788 locus=PGSC0003DMG400016208 ID=PGSC0003DMT400041788.v4.03 annot-version=v4.03
Sequence

MESLSPAIRSNRIRPSTTNSGENELLISSVKWIKLPPVARRKMRMRVAAQSSNFVVPNNI
NFSDPDWKVKYEREFEARFNIPHITDVFPDAVSYPSTFCLKMRTPVTEDFAQGYPSDEEW
HGYINNNDRVLLKTINYSSPTSAGAECIDPDCTWVEQWVHRAGPREKTYFKPEEVKAAII
TCGGLCPGLNDVIRQIVITLEIYGVKQIVGIPFGYRGFSSDDLAEMPLSRKVVQNVHLSG
GSLLGVSRGGPKVSDIVDSIQERGINMLFVIGGNGTHAGANAIHDECRRRRMQVAVVGVP
KTIDNDIMLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIGIVKLMGRSSGFIAMHASL
ASGQIDICLIPEVPFNLHGPHGVLQHLKYLLEAKGSAVICVAEGAGQDFLEKTNAKDASG
NAVLGDIGVHIQQQIKKYFKEIEVTTDVKYIDPTYMIRACRANASDRILCTVLGQNAVHG
AFAGYSGITVGICNTHYVYFPIPEVIAQPKIVDPNSRMWHRCLTSTGQPDFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400041788
Transcript Infomation

pacid=37464630 locus=PGSC0003DMG400016208 ID=PGSC0003DMT400041788.v4.03 annot-version=v4.03
Sequence

ATGGAGTCGCTTTCGCCGGCGATCAGATCAAATCGGATTCGACCGTCGACGACTAATTCC
GGCGAAAATGAGCTACTCATCAGCTCCGTCAAGTGGATAAAGTTGCCGCCGGTAGCTCGC
CGGAAAATGAGAATGAGAGTTGCAGCTCAATCAAGTAATTTCGTCGTCCCTAACAACATC
AATTTCAGCGATCCGGATTGGAAAGTGAAGTATGAGAGAGAATTCGAAGCTCGTTTCAAT
ATTCCTCACATTACTGATGTATTTCCCGACGCCGTTTCGTATCCTTCCACTTTCTGTCTC
AAAATGAGAACTCCAGTCACTGAGGATTTTGCACAAGGATATCCTTCAGATGAAGAATGG
CACGGATACATCAATAACAATGACAGAGTACTTCTTAAAACTATTAATTATTCCTCTCCG
ACTTCTGCTGGTGCTGAGTGCATTGATCCCGATTGTACATGGGTAGAGCAATGGGTTCAT
CGTGCTGGTCCTCGAGAGAAAACATATTTCAAACCAGAGGAGGTGAAAGCAGCAATCATA
ACCTGTGGTGGACTATGCCCAGGTCTTAATGACGTTATTCGACAGATAGTTATCACCCTT
GAGATATACGGTGTGAAGCAAATTGTGGGGATTCCATTTGGGTACCGTGGGTTTTCAAGC
GATGATTTAGCTGAAATGCCATTATCCAGGAAAGTGGTTCAAAATGTTCATCTTTCCGGT
GGAAGCTTGCTAGGCGTATCACGTGGAGGACCTAAAGTTTCCGATATTGTGGATAGCATT
CAGGAAAGAGGAATAAACATGCTCTTTGTGATCGGTGGAAATGGTACACATGCTGGCGCA
AACGCAATTCATGATGAGTGCCGTAGAAGACGTATGCAGGTAGCTGTAGTTGGTGTGCCA
AAAACTATAGACAATGATATTATGCTTATGGACAAAACATTTGGTTTTGATACTGCTGTT
GAAGAAGCACAGAGAGCCATTAATTCTGCTTATATTGAGGCACATAGTGCATATCATGGT
ATCGGAATTGTGAAGTTGATGGGTCGTAGCAGTGGTTTTATAGCTATGCATGCATCACTA
GCTAGTGGACAGATAGACATATGCTTGATTCCAGAGGTGCCTTTTAATCTGCACGGGCCT
CATGGCGTGTTGCAGCATCTAAAATATCTGCTTGAGGCAAAGGGATCAGCTGTGATTTGT
GTAGCAGAGGGAGCAGGGCAGGATTTCCTCGAGAAAACCAATGCAAAGGATGCATCTGGA
AATGCTGTACTTGGAGATATTGGTGTTCATATACAACAACAGATCAAAAAGTACTTCAAG
GAGATTGAGGTTACAACTGATGTTAAATACATTGATCCTACCTACATGATTCGTGCATGC
CGTGCAAATGCATCAGATCGAATTCTCTGTACTGTACTAGGTCAAAATGCTGTTCATGGT
GCATTTGCTGGATATAGCGGGATCACAGTTGGTATATGCAATACTCACTATGTGTACTTT
CCAATTCCAGAAGTCATTGCTCAACCCAAGATCGTGGACCCTAACAGTCGCATGTGGCAT
CGTTGCTTAACATCCACAGGCCAGCCGGACTTTCTTTGA