Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041781
CDS Infomation

pacid=37467343 polypeptide=PGSC0003DMP400028310 locus=PGSC0003DMG400016206 ID=PGSC0003DMT400041781.v4.03 annot-version=v4.03
Sequence

ATGTATACTCAGAGAATGCAATCTGATCCTGTTCTTGGCCGAAAAAACAATGGATTGGGC
TTTGGAGTAATATGTGGTTCTAACTTTCAAGCTGGGCATTTGCCATCTGGTGTTATCCCT
GGTTCAAGAACTATACCTGTGAGTGGCAGTGGTGGATATGATAATGGGTGGGGGTCGGAT
ATGGATATTGGTTTTGATTCGGATGATGAGGTTTATGATGGACATCACTCCGTTGAAACT
TCACCCCAAGATGATAAGTTTCCGAATGTTGGTACTTCAAAGAGAGAGGATTCCTTCAAT
AAACATATTGGTAATGCCACCAATGATGAACTTCAGCAGAAAATGTGGAACCATTCTGAG
AGTGTGTATCCTGGTAATGTAGTTAAAAGTTCATCAAATTCTGTTGCAAGTTCTAAAACT
ACAACTTCGTTGCCATTTTCGATCGGTAACAAGAGTGCCTCATCCTGGGAGTCGAATGTG
AAGTCTTCTAGACAGAGACTGAAGTTGTTCAAAAGTGATATTCCCAGTGCACCCCCGTTA
GGTGGTTCATTACAGGAATGCGATCAAGTTGCTGTGCAGCGTAAAACTTTTGTGGCAGAT
GAAATCCCCTTCCCAGAAATATCAGGTTGTTCTGTAGCAATGGATGAAGCTAAAACATAT
AAAACTGCAACCGCAGGTTCTACAAAAGATGGACAATCTGATCCATCTGGAAGGGCTGGT
GGTGTACCTTCTAATTCTTCATCTGCCCTCTTTCCAACATATCATGCTAGTGGACGAGGT
AGTTGGCAAGGTTTCGTTGCTTATGAGGCATGTATTCGACTATGTCTTCACTCATGGGAG
AAGGGTTGCCACGAGGCTCCAGCTTTCTTGGAAAATGAATGTGCCTCGTTACGAGATGCT
TTTGGCGCAAGGCAAGTGTTGTTACAATCGGAGGAAGAACTGTTGAGGAAAAGGTCCTTG
GAACTCGTCAGTGAGGGAGCCTCGATGAAGCCAAAGAAAACTTTTGGCAAGCTGAAAGTA
CAAGTGCGAAAAGTGAAAATGGCATTGGACCCACCCACAGGCTGCAGCTTTTCCACTCTG
AAACCACCAAAAGTAAAACTGGAGGCTATACGTGCTCAGTTGTCCAATGTAAAATCGACC
ATCAGTTCTGAATGGGGAGCCATACGAAAAGTTCGTGTGACTCCAAGGATTCCTCCAAAT
GGTTCTTTATCACATCAAAGCTTGGCATACCTTCATGCCGGTACTCGTTATGTGAAAGAC
GTTTCTGGTATTTTGAAACTTGGTGTAACTACTTTACGAAGCAGTTCAGCATCATATGAA
GTAGTTCCAGAGACATACTTTTGTTCGTTGAAATTGAAAAGTTTACCTGAAGAGGATACA
GTGAAAATGCTAGCTGGATCCGCTGAAACCCATCTATTCTTACCGGAGGGGCTGGGGGAT
GACTTAATTGTTGACGTACGTGACTCGAAGGGAAACTACTGCGGCCGTGCAGTAGCTCAG
GTTGCTGATATTGCTGATGATCCGGGAGACAAACTCCGTTGGTGGTCCATATATCATGAG
CCAGAGCATGAACTTGTTGGAAGAGTACAACTATACATCAATTACTCAACTAGTCCTGAT
GAAAATAGCAACACTAAGTGTGGCCTTGTCGCAGAAACCGTTGCATATGATTCTGTTTTG
GAAGCAGCAATGAAAGTTCAACAGTTTCAGCAGAGAAATTTGTTGCTCCATGGTGCTTGG
AGGTGGTTAGTAACTGAATTTGCATCATACTATGGAGTCTCGGATGCATATACAAAACTA
AGATATCTTACTTATGTCATGGATGTTGCGACGCCCACAGCAGATTGTCTGAATTTGGTA
TATGATTTGCTGCTACCCGTGGTCTCTAAACCTAAGAATAGCCTTAGTCATCAAGAGAAT
CGTATTTTAGGAGAAGTTTCTGAAAAGATCGAGCTGATTGTCGCTCTAGTTTTTGAGAAC
TACAAGTCTTTAGACGAATCATTACCATCAGGGATGGAAGATGTGTTCAAACCCGCTACT
AGAGTTGCTGCTCCTGCACTTTCTCCTGCTTTGAAGCTGTATAGTCTTCTTAATGATATT
CTTTCTCCAGAGGCCCAGTTGAAACTATGCAGATATTTTCAGACTGCTGCGAAGAAAAGA
TCCAGAAGACACTTGGCAGAAACAGATGAATTTGTCTCCAACAACAATGACAACATATTG
ATGGATCCTATGGCTCGCTCCACAGCTTACCAGAAGATGGTATCACTTTGTTCGAATATC
AGAAATGAAGTTCATACAGACATACAGATCAATAATCAAAATATACTTCCGAGTTTCCTA
GACCTCCCAAATCTTTCATCAGCCATATACTCCGCGGAGCTATGTAACAGATTGCGTGCA
TTCCTTGTTGCATGTCCTCCCACTGGTCCCTCATCTCCTGTAGCAGAACTCATTGTCGCA
ACAGCTGATCTTCAGAAGGATTTTAGTTACTGGAACATCAGTCCTGTCAAAGGTGGAGTT
GATGCAAAGGAGTTGTTCCATCCATACATTACCCTCTGGATCAAGGAGAAGCGTCTTGCT
TTGCTCGAATTGTGTAAACCTGACAAGATAAAGTGGCCCTGTGTAGATACCCAGCACTCA
ACAACTCCTTTTGTTGATGATATCTATGACCGACTGAAGGAGACATTAGCTGAATATGAT
GCTGTCATAAGACGCTGGCCTGAATATCTTTTCTCGTTGGAAACTGCTATAGCAGATGTA
GAAAAGGCGGTTATTGAAACTTTGGACAGACAGTATGCGGATGTTTTATCTCCATTAAAG
GAGAACATAATGCCCATTAAATTAGGTCTCAAGTATGTCCAGAAAATCACCAAAGGCACA
GTAACTCCGTTTGCAGTCTGCAAAGAGCTGGGAATTCTTTTGAATTCTATGAAGAGAATG
TTGGATGTTCTACGGCCCCAAATAGAACTGCAATTCAAGTCATGGGGTTCTTGCCTGCCG
GATGGAGGAAACGTCACTCCAGGAGAGCGTATCAGTGAAATTACAGTTATGTTGAGAACT
AAATTCAGAGGTTATATGCAAGCAATCATGGATAAACTGGTAGAAAATACAAGATTGCAT
AGTCCCACTAAACTGAAGAAGATAATCCAAGATGCTAAGGAAGGTACACAGGAATCTGAT
TTACGAGTTAGGATTCAGCCGCTGAAGGATCTGCTGGATAATGCAATTGAGCAACTTCAT
ATGGTATTTGAGACGCAAGTTTTCATAATTATTTGTCGAGGCTTCTGGGATCGTATGGGG
CAGGATGTGCTCAAGTTTTTGGAAGAGAGGAAAGACAATAGATCTTGGTACAAAGCATCA
CGAGTCGCAGTATCGGTTAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028310
PEP Infomation

pacid=37467343 transcript=PGSC0003DMT400041781 locus=PGSC0003DMG400016206 ID=PGSC0003DMT400041781.v4.03 annot-version=v4.03
Sequence

MYTQRMQSDPVLGRKNNGLGFGVICGSNFQAGHLPSGVIPGSRTIPVSGSGGYDNGWGSD
MDIGFDSDDEVYDGHHSVETSPQDDKFPNVGTSKREDSFNKHIGNATNDELQQKMWNHSE
SVYPGNVVKSSSNSVASSKTTTSLPFSIGNKSASSWESNVKSSRQRLKLFKSDIPSAPPL
GGSLQECDQVAVQRKTFVADEIPFPEISGCSVAMDEAKTYKTATAGSTKDGQSDPSGRAG
GVPSNSSSALFPTYHASGRGSWQGFVAYEACIRLCLHSWEKGCHEAPAFLENECASLRDA
FGARQVLLQSEEELLRKRSLELVSEGASMKPKKTFGKLKVQVRKVKMALDPPTGCSFSTL
KPPKVKLEAIRAQLSNVKSTISSEWGAIRKVRVTPRIPPNGSLSHQSLAYLHAGTRYVKD
VSGILKLGVTTLRSSSASYEVVPETYFCSLKLKSLPEEDTVKMLAGSAETHLFLPEGLGD
DLIVDVRDSKGNYCGRAVAQVADIADDPGDKLRWWSIYHEPEHELVGRVQLYINYSTSPD
ENSNTKCGLVAETVAYDSVLEAAMKVQQFQQRNLLLHGAWRWLVTEFASYYGVSDAYTKL
RYLTYVMDVATPTADCLNLVYDLLLPVVSKPKNSLSHQENRILGEVSEKIELIVALVFEN
YKSLDESLPSGMEDVFKPATRVAAPALSPALKLYSLLNDILSPEAQLKLCRYFQTAAKKR
SRRHLAETDEFVSNNNDNILMDPMARSTAYQKMVSLCSNIRNEVHTDIQINNQNILPSFL
DLPNLSSAIYSAELCNRLRAFLVACPPTGPSSPVAELIVATADLQKDFSYWNISPVKGGV
DAKELFHPYITLWIKEKRLALLELCKPDKIKWPCVDTQHSTTPFVDDIYDRLKETLAEYD
AVIRRWPEYLFSLETAIADVEKAVIETLDRQYADVLSPLKENIMPIKLGLKYVQKITKGT
VTPFAVCKELGILLNSMKRMLDVLRPQIELQFKSWGSCLPDGGNVTPGERISEITVMLRT
KFRGYMQAIMDKLVENTRLHSPTKLKKIIQDAKEGTQESDLRVRIQPLKDLLDNAIEQLH
MVFETQVFIIICRGFWDRMGQDVLKFLEERKDNRSWYKASRVAVSVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400041781
Transcript Infomation

pacid=37467343 locus=PGSC0003DMG400016206 ID=PGSC0003DMT400041781.v4.03 annot-version=v4.03
Sequence

ATGTATACTCAGAGAATGCAATCTGATCCTGTTCTTGGCCGAAAAAACAATGGATTGGGC
TTTGGAGTAATATGTGGTTCTAACTTTCAAGCTGGGCATTTGCCATCTGGTGTTATCCCT
GGTTCAAGAACTATACCTGTGAGTGGCAGTGGTGGATATGATAATGGGTGGGGGTCGGAT
ATGGATATTGGTTTTGATTCGGATGATGAGGTTTATGATGGACATCACTCCGTTGAAACT
TCACCCCAAGATGATAAGTTTCCGAATGTTGGTACTTCAAAGAGAGAGGATTCCTTCAAT
AAACATATTGGTAATGCCACCAATGATGAACTTCAGCAGAAAATGTGGAACCATTCTGAG
AGTGTGTATCCTGGTAATGTAGTTAAAAGTTCATCAAATTCTGTTGCAAGTTCTAAAACT
ACAACTTCGTTGCCATTTTCGATCGGTAACAAGAGTGCCTCATCCTGGGAGTCGAATGTG
AAGTCTTCTAGACAGAGACTGAAGTTGTTCAAAAGTGATATTCCCAGTGCACCCCCGTTA
GGTGGTTCATTACAGGAATGCGATCAAGTTGCTGTGCAGCGTAAAACTTTTGTGGCAGAT
GAAATCCCCTTCCCAGAAATATCAGGTTGTTCTGTAGCAATGGATGAAGCTAAAACATAT
AAAACTGCAACCGCAGGTTCTACAAAAGATGGACAATCTGATCCATCTGGAAGGGCTGGT
GGTGTACCTTCTAATTCTTCATCTGCCCTCTTTCCAACATATCATGCTAGTGGACGAGGT
AGTTGGCAAGGTTTCGTTGCTTATGAGGCATGTATTCGACTATGTCTTCACTCATGGGAG
AAGGGTTGCCACGAGGCTCCAGCTTTCTTGGAAAATGAATGTGCCTCGTTACGAGATGCT
TTTGGCGCAAGGCAAGTGTTGTTACAATCGGAGGAAGAACTGTTGAGGAAAAGGTCCTTG
GAACTCGTCAGTGAGGGAGCCTCGATGAAGCCAAAGAAAACTTTTGGCAAGCTGAAAGTA
CAAGTGCGAAAAGTGAAAATGGCATTGGACCCACCCACAGGCTGCAGCTTTTCCACTCTG
AAACCACCAAAAGTAAAACTGGAGGCTATACGTGCTCAGTTGTCCAATGTAAAATCGACC
ATCAGTTCTGAATGGGGAGCCATACGAAAAGTTCGTGTGACTCCAAGGATTCCTCCAAAT
GGTTCTTTATCACATCAAAGCTTGGCATACCTTCATGCCGGTACTCGTTATGTGAAAGAC
GTTTCTGGTATTTTGAAACTTGGTGTAACTACTTTACGAAGCAGTTCAGCATCATATGAA
GTAGTTCCAGAGACATACTTTTGTTCGTTGAAATTGAAAAGTTTACCTGAAGAGGATACA
GTGAAAATGCTAGCTGGATCCGCTGAAACCCATCTATTCTTACCGGAGGGGCTGGGGGAT
GACTTAATTGTTGACGTACGTGACTCGAAGGGAAACTACTGCGGCCGTGCAGTAGCTCAG
GTTGCTGATATTGCTGATGATCCGGGAGACAAACTCCGTTGGTGGTCCATATATCATGAG
CCAGAGCATGAACTTGTTGGAAGAGTACAACTATACATCAATTACTCAACTAGTCCTGAT
GAAAATAGCAACACTAAGTGTGGCCTTGTCGCAGAAACCGTTGCATATGATTCTGTTTTG
GAAGCAGCAATGAAAGTTCAACAGTTTCAGCAGAGAAATTTGTTGCTCCATGGTGCTTGG
AGGTGGTTAGTAACTGAATTTGCATCATACTATGGAGTCTCGGATGCATATACAAAACTA
AGATATCTTACTTATGTCATGGATGTTGCGACGCCCACAGCAGATTGTCTGAATTTGGTA
TATGATTTGCTGCTACCCGTGGTCTCTAAACCTAAGAATAGCCTTAGTCATCAAGAGAAT
CGTATTTTAGGAGAAGTTTCTGAAAAGATCGAGCTGATTGTCGCTCTAGTTTTTGAGAAC
TACAAGTCTTTAGACGAATCATTACCATCAGGGATGGAAGATGTGTTCAAACCCGCTACT
AGAGTTGCTGCTCCTGCACTTTCTCCTGCTTTGAAGCTGTATAGTCTTCTTAATGATATT
CTTTCTCCAGAGGCCCAGTTGAAACTATGCAGATATTTTCAGACTGCTGCGAAGAAAAGA
TCCAGAAGACACTTGGCAGAAACAGATGAATTTGTCTCCAACAACAATGACAACATATTG
ATGGATCCTATGGCTCGCTCCACAGCTTACCAGAAGATGGTATCACTTTGTTCGAATATC
AGAAATGAAGTTCATACAGACATACAGATCAATAATCAAAATATACTTCCGAGTTTCCTA
GACCTCCCAAATCTTTCATCAGCCATATACTCCGCGGAGCTATGTAACAGATTGCGTGCA
TTCCTTGTTGCATGTCCTCCCACTGGTCCCTCATCTCCTGTAGCAGAACTCATTGTCGCA
ACAGCTGATCTTCAGAAGGATTTTAGTTACTGGAACATCAGTCCTGTCAAAGGTGGAGTT
GATGCAAAGGAGTTGTTCCATCCATACATTACCCTCTGGATCAAGGAGAAGCGTCTTGCT
TTGCTCGAATTGTGTAAACCTGACAAGATAAAGTGGCCCTGTGTAGATACCCAGCACTCA
ACAACTCCTTTTGTTGATGATATCTATGACCGACTGAAGGAGACATTAGCTGAATATGAT
GCTGTCATAAGACGCTGGCCTGAATATCTTTTCTCGTTGGAAACTGCTATAGCAGATGTA
GAAAAGGCGGTTATTGAAACTTTGGACAGACAGTATGCGGATGTTTTATCTCCATTAAAG
GAGAACATAATGCCCATTAAATTAGGTCTCAAGTATGTCCAGAAAATCACCAAAGGCACA
GTAACTCCGTTTGCAGTCTGCAAAGAGCTGGGAATTCTTTTGAATTCTATGAAGAGAATG
TTGGATGTTCTACGGCCCCAAATAGAACTGCAATTCAAGTCATGGGGTTCTTGCCTGCCG
GATGGAGGAAACGTCACTCCAGGAGAGCGTATCAGTGAAATTACAGTTATGTTGAGAACT
AAATTCAGAGGTTATATGCAAGCAATCATGGATAAACTGGTAGAAAATACAAGATTGCAT
AGTCCCACTAAACTGAAGAAGATAATCCAAGATGCTAAGGAAGGTACACAGGAATCTGAT
TTACGAGTTAGGATTCAGCCGCTGAAGGATCTGCTGGATAATGCAATTGAGCAACTTCAT
ATGGTATTTGAGACGCAAGTTTTCATAATTATTTGTCGAGGCTTCTGGGATCGTATGGGG
CAGGATGTGCTCAAGTTTTTGGAAGAGAGGAAAGACAATAGATCTTGGTACAAAGCATCA
CGAGTCGCAGTATCGGTTAGTTGA