Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041754
CDS Infomation

pacid=37467337 polypeptide=PGSC0003DMP400028288 locus=PGSC0003DMG400016192 ID=PGSC0003DMT400041754.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAAACAGCAAAAAATTGCATATTGCAGTATTTCCATGGCTAGCTTTTGGTCAT
ATGATTCCGTATTTAGAGCTATCAAAGCTTATAGCTCAAAAGGGTCATAAAATTTCATTT
ATTTCGACTCCTAGAAACATTGATCGTCTCCCAAAACTTCCACCAAATCTTACTCCCTTT
TTAAATTTCGTCAAACTTCCAATGCCCCATGTGGAAAAGTTACCGGAAAATGCAGAAGCC
ACCATTGATTTACCTTATGAGCAAGTGAAGTATCTCAAACTTGCTCATGATGCACTCAAA
GAATCAATGGCTAAGTTTCTCGAAGATTCAGATATTGATTTTATACTATTTGATTTTGCT
TCTTATTGGATTCCTTCAATTGCTTCAAAATTCAACATTCCGACAGGTTACTTCAGCATA
TTCATCGCTGCGGTTCTAGGTTTCGTCGGACCTGAGCCGGGATTGAACAATGATTATGAA
ATTCGGAAGACGCCAGAGGAATACACCGTTCCCCCAAAATGGGTGTCGTTTGAAACCACC
GTTGCTTTCAAGCTTTTCGAAGTTTTGAGAATCTTCGAAGCTTCCATGAAGGGAGAGGAA
GAGAACGTTTCTGATATTTTTCGTATCTATAAAGCTGCTGAACACTCTGATTTTTTGCTT
GTGAGGAGCTGTTCGGAATTTGAACCGGAATGGTTGAAAGTTGTCGGAGATATCCACCGG
AAGCCGGTTTTTCCGGTAGGCCAACTTTCGACAACAACGTATGAAGATGACAACACGAAA
ATCGATGCATGGAGAGAGATAAAACTGTGGCTTGATGAGCAAGAGAAGGGGAAGGTGATT
TACGTGGCATTTGGTAGCGAGGCGAAACCAAGTCAAAATGAACTCACTGAGTTATCACTC
GGGTTAGAGCTTTCTGGGTTGCCATTCTTTTGGGTTTTAAGAACTAAAAGAGGGGAATCC
GATGATGAATTGATTCAATTACCTGAAGGTTTCGAAGAACGAACGAAGGGAAGAGGAATA
GTGTGCACTAGTTGGGCGCCACAACTCAAGATACTGAGTCATGACTCAGTGGGTGGATTT
TTGACTCATTCAGGATGGAGTTCAGTAGTCGAGGCAATACAATTTGAGAAATCATTGGTT
CTCTTAACATTTTTGGCTGATCAAGGGATAAATGCTAGGCTTTTGGAGGAGAAGGAGATG
GCGTATTCGATACCGAGAAATGATCAAGACGGGTCGTTCACTTGTGACTCAGTGGCTAAG
TCACTGAATTTGGTACTCGTTAAAGAAGAGGGTTTTATTTATCAAGAAAAGATTAAAGAG
ATGAAAGATCTTTTCTGTGACAAGGAAAGGCAAAATAATTATGTGGAGAATTTGTTAAGT
TTTCTTCAAAATTATGAAAAGATTAAAGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400028288
PEP Infomation

pacid=37467337 transcript=PGSC0003DMT400041754 locus=PGSC0003DMG400016192 ID=PGSC0003DMT400041754.v4.03 annot-version=v4.03
Sequence

MAENSKKLHIAVFPWLAFGHMIPYLELSKLIAQKGHKISFISTPRNIDRLPKLPPNLTPF
LNFVKLPMPHVEKLPENAEATIDLPYEQVKYLKLAHDALKESMAKFLEDSDIDFILFDFA
SYWIPSIASKFNIPTGYFSIFIAAVLGFVGPEPGLNNDYEIRKTPEEYTVPPKWVSFETT
VAFKLFEVLRIFEASMKGEEENVSDIFRIYKAAEHSDFLLVRSCSEFEPEWLKVVGDIHR
KPVFPVGQLSTTTYEDDNTKIDAWREIKLWLDEQEKGKVIYVAFGSEAKPSQNELTELSL
GLELSGLPFFWVLRTKRGESDDELIQLPEGFEERTKGRGIVCTSWAPQLKILSHDSVGGF
LTHSGWSSVVEAIQFEKSLVLLTFLADQGINARLLEEKEMAYSIPRNDQDGSFTCDSVAK
SLNLVLVKEEGFIYQEKIKEMKDLFCDKERQNNYVENLLSFLQNYEKIKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400041754
Transcript Infomation

pacid=37467337 locus=PGSC0003DMG400016192 ID=PGSC0003DMT400041754.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAAACAGCAAAAAATTGCATATTGCAGTATTTCCATGGCTAGCTTTTGGTCAT
ATGATTCCGTATTTAGAGCTATCAAAGCTTATAGCTCAAAAGGGTCATAAAATTTCATTT
ATTTCGACTCCTAGAAACATTGATCGTCTCCCAAAACTTCCACCAAATCTTACTCCCTTT
TTAAATTTCGTCAAACTTCCAATGCCCCATGTGGAAAAGTTACCGGAAAATGCAGAAGCC
ACCATTGATTTACCTTATGAGCAAGTGAAGTATCTCAAACTTGCTCATGATGCACTCAAA
GAATCAATGGCTAAGTTTCTCGAAGATTCAGATATTGATTTTATACTATTTGATTTTGCT
TCTTATTGGATTCCTTCAATTGCTTCAAAATTCAACATTCCGACAGGTTACTTCAGCATA
TTCATCGCTGCGGTTCTAGGTTTCGTCGGACCTGAGCCGGGATTGAACAATGATTATGAA
ATTCGGAAGACGCCAGAGGAATACACCGTTCCCCCAAAATGGGTGTCGTTTGAAACCACC
GTTGCTTTCAAGCTTTTCGAAGTTTTGAGAATCTTCGAAGCTTCCATGAAGGGAGAGGAA
GAGAACGTTTCTGATATTTTTCGTATCTATAAAGCTGCTGAACACTCTGATTTTTTGCTT
GTGAGGAGCTGTTCGGAATTTGAACCGGAATGGTTGAAAGTTGTCGGAGATATCCACCGG
AAGCCGGTTTTTCCGGTAGGCCAACTTTCGACAACAACGTATGAAGATGACAACACGAAA
ATCGATGCATGGAGAGAGATAAAACTGTGGCTTGATGAGCAAGAGAAGGGGAAGGTGATT
TACGTGGCATTTGGTAGCGAGGCGAAACCAAGTCAAAATGAACTCACTGAGTTATCACTC
GGGTTAGAGCTTTCTGGGTTGCCATTCTTTTGGGTTTTAAGAACTAAAAGAGGGGAATCC
GATGATGAATTGATTCAATTACCTGAAGGTTTCGAAGAACGAACGAAGGGAAGAGGAATA
GTGTGCACTAGTTGGGCGCCACAACTCAAGATACTGAGTCATGACTCAGTGGGTGGATTT
TTGACTCATTCAGGATGGAGTTCAGTAGTCGAGGCAATACAATTTGAGAAATCATTGGTT
CTCTTAACATTTTTGGCTGATCAAGGGATAAATGCTAGGCTTTTGGAGGAGAAGGAGATG
GCGTATTCGATACCGAGAAATGATCAAGACGGGTCGTTCACTTGTGACTCAGTGGCTAAG
TCACTGAATTTGGTACTCGTTAAAGAAGAGGGTTTTATTTATCAAGAAAAGATTAAAGAG
ATGAAAGATCTTTTCTGTGACAAGGAAAGGCAAAATAATTATGTGGAGAATTTGTTAAGT
TTTCTTCAAAATTATGAAAAGATTAAAGCATGA