Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041752
CDS Infomation

pacid=37466526 polypeptide=PGSC0003DMP400028286 locus=PGSC0003DMG400016190 ID=PGSC0003DMT400041752.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAAATAGCAAAAAATTGCATATTGCAGTATTTCCATGGTTAGCTTTTGGCCAT
ATGATTCCGTATTTAGAGCTCTCAAAGCTCATAGCTCAAAAGGGTCATAGAATTTCCTTT
ATTTCGACTCCTAGAAACATTGATCGTCTCCCAAAACTTCCACCAAATCTTATCCCCTTT
TTAAATTTTGTCAAACTTCCTATGCCCCATGTGGAAAGGTTGCCGGAAAATGCAGAAGCC
ACCATCGATGTACCTTATGAGCAAGTCAAATACCTCAAACTTGCTCAAGATGGACTTGAA
GAATCCATGGCTAAGTTTCTCGAAGATTCAGATCTTGATTTTATACTCTTCGATTTTACT
TCTTACTGGGTTCCTTCAATTGCTTCAAAATTCAACATTCCGTCAGGTCATTTCAGCATA
TTCATCGCTGCGTTTCTGGGTTTCACCGGACCTGTACCGGGATTGAACAATGATTATGAA
ATTCGGACAACGCCGGAGGAATATACCGTTCCCCCAAAATGGGTTCCGTTTGAAACCACA
GTTGCTTTCAAGCTTTTCGAAGTTTTGAGAATCTTCGAAGCTACCATGAAGGGAGAGGAA
GACAACATTGCTGATATTACTCGTTACTGTAAATCAGTTGAAAATTGTGATTTTTTGCTT
GTGAGGAGCTGTTCGGAATTAGAACCAGAATGGTTGAAAGTTGTCGGAGATATTCACCGG
AAACCGGTTTTTCCGGTGGGTCAACTTCCGACAACGCCGTATGAAGATGACAGCACGGAG
ATGGATGCGTGGAAAGAGATAAAACTATGGCTTGATAAGCAAGAAAAGGGGAAAGTGATT
TACGTTGCATTTGGTAGCGAGACAAAACCAAGTCAAAACGAACTCACTGAGTTATCACTT
GGGTTAGAGCTTTCTGGGTTACCATTTTTTTGGGTTTTAAGAACTAAAAGAGGAGAATCG
GATGATGAATTGACTCAATTACCAGAAGGATTCGAAGATCGAACGAAGGGAAGAGGAATA
GTGTGCACGAGTTGGGCACCACAGCTCAAGATACTGAGTCATGACTCAGTTGGTGGATTT
TTGACACATTCGGGGTGGAGTTCAGTGGTCGAGGCAATACAATTTGAGAAGTCATTAGTT
CTCTTAACATTTTCGGCTGATCAAGGGATAAATGCTAGGCTTTTGGAGGAGAAAAAAATA
GCGTATTCAATACCAAGAGATGACTGCGACGGATCATTCACTCATGAGTCAATAGCTGAG
TCACTGAATTTGGTACTCGTTAAAAGAGAAGGTGAAATATATCGGGAGAAAGTTAAAGAG
ATGAAAAGTCTTTTCTGTGACAAAGAAAGGCAAGATAATTATGTGGAGAATTTATTACGT
TATCTTCAAAATTATAAGAGGACCATAACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400028286
PEP Infomation

pacid=37466526 transcript=PGSC0003DMT400041752 locus=PGSC0003DMG400016190 ID=PGSC0003DMT400041752.v4.03 annot-version=v4.03
Sequence

MAENSKKLHIAVFPWLAFGHMIPYLELSKLIAQKGHRISFISTPRNIDRLPKLPPNLIPF
LNFVKLPMPHVERLPENAEATIDVPYEQVKYLKLAQDGLEESMAKFLEDSDLDFILFDFT
SYWVPSIASKFNIPSGHFSIFIAAFLGFTGPVPGLNNDYEIRTTPEEYTVPPKWVPFETT
VAFKLFEVLRIFEATMKGEEDNIADITRYCKSVENCDFLLVRSCSELEPEWLKVVGDIHR
KPVFPVGQLPTTPYEDDSTEMDAWKEIKLWLDKQEKGKVIYVAFGSETKPSQNELTELSL
GLELSGLPFFWVLRTKRGESDDELTQLPEGFEDRTKGRGIVCTSWAPQLKILSHDSVGGF
LTHSGWSSVVEAIQFEKSLVLLTFSADQGINARLLEEKKIAYSIPRDDCDGSFTHESIAE
SLNLVLVKREGEIYREKVKEMKSLFCDKERQDNYVENLLRYLQNYKRTIT*

Transcript Sequence

Transcript ID

PGSC0003DMT400041752
Transcript Infomation

pacid=37466526 locus=PGSC0003DMG400016190 ID=PGSC0003DMT400041752.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAAATAGCAAAAAATTGCATATTGCAGTATTTCCATGGTTAGCTTTTGGCCAT
ATGATTCCGTATTTAGAGCTCTCAAAGCTCATAGCTCAAAAGGGTCATAGAATTTCCTTT
ATTTCGACTCCTAGAAACATTGATCGTCTCCCAAAACTTCCACCAAATCTTATCCCCTTT
TTAAATTTTGTCAAACTTCCTATGCCCCATGTGGAAAGGTTGCCGGAAAATGCAGAAGCC
ACCATCGATGTACCTTATGAGCAAGTCAAATACCTCAAACTTGCTCAAGATGGACTTGAA
GAATCCATGGCTAAGTTTCTCGAAGATTCAGATCTTGATTTTATACTCTTCGATTTTACT
TCTTACTGGGTTCCTTCAATTGCTTCAAAATTCAACATTCCGTCAGGTCATTTCAGCATA
TTCATCGCTGCGTTTCTGGGTTTCACCGGACCTGTACCGGGATTGAACAATGATTATGAA
ATTCGGACAACGCCGGAGGAATATACCGTTCCCCCAAAATGGGTTCCGTTTGAAACCACA
GTTGCTTTCAAGCTTTTCGAAGTTTTGAGAATCTTCGAAGCTACCATGAAGGGAGAGGAA
GACAACATTGCTGATATTACTCGTTACTGTAAATCAGTTGAAAATTGTGATTTTTTGCTT
GTGAGGAGCTGTTCGGAATTAGAACCAGAATGGTTGAAAGTTGTCGGAGATATTCACCGG
AAACCGGTTTTTCCGGTGGGTCAACTTCCGACAACGCCGTATGAAGATGACAGCACGGAG
ATGGATGCGTGGAAAGAGATAAAACTATGGCTTGATAAGCAAGAAAAGGGGAAAGTGATT
TACGTTGCATTTGGTAGCGAGACAAAACCAAGTCAAAACGAACTCACTGAGTTATCACTT
GGGTTAGAGCTTTCTGGGTTACCATTTTTTTGGGTTTTAAGAACTAAAAGAGGAGAATCG
GATGATGAATTGACTCAATTACCAGAAGGATTCGAAGATCGAACGAAGGGAAGAGGAATA
GTGTGCACGAGTTGGGCACCACAGCTCAAGATACTGAGTCATGACTCAGTTGGTGGATTT
TTGACACATTCGGGGTGGAGTTCAGTGGTCGAGGCAATACAATTTGAGAAGTCATTAGTT
CTCTTAACATTTTCGGCTGATCAAGGGATAAATGCTAGGCTTTTGGAGGAGAAAAAAATA
GCGTATTCAATACCAAGAGATGACTGCGACGGATCATTCACTCATGAGTCAATAGCTGAG
TCACTGAATTTGGTACTCGTTAAAAGAGAAGGTGAAATATATCGGGAGAAAGTTAAAGAG
ATGAAAAGTCTTTTCTGTGACAAAGAAAGGCAAGATAATTATGTGGAGAATTTATTACGT
TATCTTCAAAATTATAAGAGGACCATAACATAA