Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041751
CDS Infomation

pacid=37466741 polypeptide=PGSC0003DMP400028285 locus=PGSC0003DMG400016189 ID=PGSC0003DMT400041751.v4.03 annot-version=v4.03
Sequence

ATGAACAACCAAAACCACTTCCGTCCGCCGATCAAAAGGTTCGGCAGCGGTAGCGGTAGC
GGCGGAGATCCAACAGCGGTACTTCAACCGGGTCAAGTTCATTTCCGCTTACTCTGCCAC
GTCAGCACAGCTGGTGGAGTCATCGGAAACTCCGGAGGTTTAATTAGGCAGCTGGAAGCT
CAAACCGGGTGCAGAATCCGGTTTGAGGAACCGTTACCGAATTGCCATGAACGGGTTGTG
AACATCATTGGTGATTCGATTATAGATAGGAAAATCAGGATAAGCTATGATGGGAGTAGT
GAGGAAGTTGAGGTAGTGGAAGTTTCTAGAGCACAGGAAGGTTTGATTCGGGTTTACGAA
AGGGTTTTGCAGCTGGAAGGGAATGGTGGAGCAGTTGGGTGCAGATTGCTTGCGATTTCT
GGTCAAATTGGAGCTTTAATGGGAAAAGGTGGTGTAATTGTGGATGGTATAAGGAAAAGT
ACAGGAGCTAAGATTAAGGTTTTGACGAAAGAGCAGCTTCCAGCTTGTGCCATCCCGGGA
GAAGAATTGATTCAGATAATGGGTGTAATTGCTGTGGTAAAGAGAGCATTGGTTCATGTT
TCTCGGCGTCTTCAAGTTCGCTTACCAGCTGAGAGATACAAAGACCAAGTTACTTCAAAA
GGTGCATCCCATGAACAACCTGCGGACTATCCTCTGGATACCAAATCCTCAATACAACCT
TTGCCGAGAAATGCCGTTAATCATTCTTCAGTAGCCCATTCATTGTCATCCGATGTTGAT
AGAGTTCTGAATCTGGATGCTGACTCTGCTCAAAGAAAAGTAGTCTTTAGATTGCTTTGC
TCTTATATCTCTGCTGGAGGTGTGATTGGTAAGGGTGCCCATATTGTCAAAGCTCTAGAG
AAAGATACTGGAGCTTCTATAAAATTTTCCACTCCAACAGTACGGTCAAAAGAGCGTGTG
GCCATCATATCTTCGCTTGAAGTTCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028285
PEP Infomation

pacid=37466741 transcript=PGSC0003DMT400041751 locus=PGSC0003DMG400016189 ID=PGSC0003DMT400041751.v4.03 annot-version=v4.03
Sequence

MNNQNHFRPPIKRFGSGSGSGGDPTAVLQPGQVHFRLLCHVSTAGGVIGNSGGLIRQLEA
QTGCRIRFEEPLPNCHERVVNIIGDSIIDRKIRISYDGSSEEVEVVEVSRAQEGLIRVYE
RVLQLEGNGGAVGCRLLAISGQIGALMGKGGVIVDGIRKSTGAKIKVLTKEQLPACAIPG
EELIQIMGVIAVVKRALVHVSRRLQVRLPAERYKDQVTSKGASHEQPADYPLDTKSSIQP
LPRNAVNHSSVAHSLSSDVDRVLNLDADSAQRKVVFRLLCSYISAGGVIGKGAHIVKALE
KDTGASIKFSTPTVRSKERVAIISSLEVQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400041751
Transcript Infomation

pacid=37466741 locus=PGSC0003DMG400016189 ID=PGSC0003DMT400041751.v4.03 annot-version=v4.03
Sequence

ATGAACAACCAAAACCACTTCCGTCCGCCGATCAAAAGGTTCGGCAGCGGTAGCGGTAGC
GGCGGAGATCCAACAGCGGTACTTCAACCGGGTCAAGTTCATTTCCGCTTACTCTGCCAC
GTCAGCACAGCTGGTGGAGTCATCGGAAACTCCGGAGGTTTAATTAGGCAGCTGGAAGCT
CAAACCGGGTGCAGAATCCGGTTTGAGGAACCGTTACCGAATTGCCATGAACGGGTTGTG
AACATCATTGGTGATTCGATTATAGATAGGAAAATCAGGATAAGCTATGATGGGAGTAGT
GAGGAAGTTGAGGTAGTGGAAGTTTCTAGAGCACAGGAAGGTTTGATTCGGGTTTACGAA
AGGGTTTTGCAGCTGGAAGGGAATGGTGGAGCAGTTGGGTGCAGATTGCTTGCGATTTCT
GGTCAAATTGGAGCTTTAATGGGAAAAGGTGGTGTAATTGTGGATGGTATAAGGAAAAGT
ACAGGAGCTAAGATTAAGGTTTTGACGAAAGAGCAGCTTCCAGCTTGTGCCATCCCGGGA
GAAGAATTGATTCAGATAATGGGTGTAATTGCTGTGGTAAAGAGAGCATTGGTTCATGTT
TCTCGGCGTCTTCAAGTTCGCTTACCAGCTGAGAGATACAAAGACCAAGTTACTTCAAAA
GGTGCATCCCATGAACAACCTGCGGACTATCCTCTGGATACCAAATCCTCAATACAACCT
TTGCCGAGAAATGCCGTTAATCATTCTTCAGTAGCCCATTCATTGTCATCCGATGTTGAT
AGAGTTCTGAATCTGGATGCTGACTCTGCTCAAAGAAAAGTAGTCTTTAGATTGCTTTGC
TCTTATATCTCTGCTGGAGGTGTGATTGGTAAGGGTGCCCATATTGTCAAAGCTCTAGAG
AAAGATACTGGAGCTTCTATAAAATTTTCCACTCCAACAGTACGGTCAAAAGAGCGTGTG
GCCATCATATCTTCGCTTGAAGTTCAGTGA