Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041748
CDS Infomation

pacid=37467593 polypeptide=PGSC0003DMP400028283 locus=PGSC0003DMG400016188 ID=PGSC0003DMT400041748.v4.03 annot-version=v4.03
Sequence

ATGGATGACATTCAATTTAACCCTTTTGAGCAAAACCCAGAAACCCCTTTTCCAGATTTA
CCCAGTAATTTTGAATGGGAAGAAAAACCCTTGCATCAAGAAACTGCAGTTTCTGCCATT
GACCAAGATGAAAATTTTCAATTTTTAGCCGATTCGATGGTCTGTGACTCGGGTTCAAGA
CTAATCCCAAGTGGGTTTACTAGATCCAGCTGTACAGAGGACCTTGTGCTTTTTGTTAAT
GCTGGATCGGAGACGTCAGTGGAGTTGGACTCCAGTCTGAGCTTTCTGGCTGACAATTTT
TACCAAGGTGGAGAACCATTTCAAACGGAGGAGTTCATTACAGAGGGAGGTGAACATGCT
TTCATTTACCAGTCAGCAAGATTAGGAAACTTCTGTTATCAGATTGACAATCTTACACCA
GGAAATTACTTTATTGATCTTCATTTTGTCGAGATAATAAATGTAAATGGGCCTAAAGGA
ATGCGAGTGTTCAATGTCTTTCTACAAGATGAGAAGGTTCTGTCTGATTTTGACATCTTC
TCTGTTGTTGGAGCCAATAAACCGCTACAATTTGTTGACTCAAGGGTTTCCATCAAAGAG
AATGGGATACTTTTGATAAAATTTGAAGGAATTATTGGCAGTCCCGTGGTTAGTGGAATT
TGCATAAGAAAAGCTCCAAAAGCATCAGCTTCTCAAGCAGAACATGATCGTCTTACATGC
AAAAACTGTGCAACCGAGATAGATTTTCCATCAGCACAGAAAAAAGTGGCACGATTGCAG
TCAACAGCCAAGTATGAGAATAAGATACAGGAGCTTGGTGAATTGTTGAAGCGCAAGACA
GATGAATGTTATCAATCTTGGATGTCTTATACTGCAGCTAACCAGCAACTAGAGAAGGTT
AGGATGGAGCTGGACAATAAGACATTTCATACCTACTCACTTGATCAGAAATTCGAGGAG
CAAGCTAAGACTATTACAGAAATCTCAACCAAGTACGAGCGCGACAAGAACTATTGGCAC
ATGGCAATCAATGATCTCGAGATGAAAGTAAAGATAATGAAGCAGGAGCACTCCCAGCTC
TCTCGCGATGCGCACGAGTGTACAGACTCAATCCCTGATCTGAATAAAATGGTCTCGGCA
GTTCAGTCACTGGTTGAGCAATATGAAGATCTTAAGATGAAGTACAACGACGAGCAAGCT
AAGAGAAGAAAGCTCTTCAATGAAGTTCAAGAGGCAAAAGGGAATATCAGAGTATTTTGC
CGCTGCCGTCCATTAAGCAAAGCTGAAGTCTCAGATGGATGCTCAACGGTCATAGACTTT
GATGTCGCCAAGGATGGAGAACTTGGAATCTTAAATGGCAGCTCCACGAAAAAGACATTT
AAATTTGACCGTGTCTACACACCCAGAGATGATCAAGGTGATGTCTATGCCGATGCTTCA
CCAATGGTCATTTCAGTTTTAGATGGTTACAACGTATGTATCTTTGCTTATGGACAAACG
GGAACGGGAAAAACGTTCACCATGGAGGGTACAAAAGGAAACAGAGGAGTCAACTATCGG
ACTCTTGAAGAATTGTTTAAAATTGCGAAGGAGAGGAATGAAACTTTCACCTATGACATA
TCAGTCAGTGTGCTTGAAGTCTACAATGAACAGATCAGGGACCTATTAGCTCCACCGACA
ACATCAAAAAAGTTGGAGATAAAACAAGCTCCGGAAGGGCTTCATCACATTCCAGGACTT
GTGGAAGCCAAAGTAGAAAATATAGAAGAAGTCTGGAATGTGCTGCAGACTGGAAGTAGT
GCACGGGCTGTTGGATCCAACAATGTGAATGAGCACAGTAGCCGTTCTCACTGCATGCTT
TGTATTATGGTAACAGCCAAGAACTTGATCGACGGTGAATGCACAAAGAGCAAGCTTTGG
CTTGTGGATTTAGCTGGTAGTGAGAGGCTTGCGAAGACTGATGTCCAAGGTGAGAGACTG
AAGGAAGCTCAAAATATCAATAGGTCACTTTCCGCTCTAGGAGATGTGATATCAGCTTTA
GCAAATAGAAGCAGCCATATTCCATACAGAAACTCCAAGTTGACACATCTACTCCAAGAT
TCATTAGGTGGGGATTCAAAAGCATTGATGTTTGTACAGATCAGCCCGTCTGATAAGGAC
TTAAGTGAAACTATAAGTTCATTGAACTTTGCTACAAGAGTTAGAGGAGTTGAGTTAGGT
CCTGTAAGAAAACAAGTTGATACCGGCGAGATCCAAAAGTTGAAAACCATGCTTGACAGA
GCGAAGCAGGAAACTAAATCTAAAGACGAATCCTTGAAGAAACTTGAGGAAAGCCTACAG
AACTTAGAGAGTAAGGCTAAAGGGAAGGAACATGTTAACAAAACTCAACAGGATAAGATT
AAGGAACTGGAAAGCCAGCTCAATTTAAAGACATCATTACATGGCCAATCGGAAAAACAA
CTTTCACAGCTTTCAGAGAGGTTGAAGGGACGTGAAGAAACTTGTGCTACTCTTCAACAG
AAGATCTCAGAGCTAGAGAACAAGATGAGACAGCAGCAGCAATTTGAGTCTGAAAGCTTC
AACAATAAGGTCAAGGATCTCGAGGACAAGCTAAAAGAGCGAGAGCACGAGTTTGTGTCT
CAGTCTGACATCCTTCAACATAAGGTTGAAGAGCTTGAGGAAACGCTGAAAGCAAAAGAA
CAGAACGCACAGGAGTGCATTCTACTCCGTCAGAAGATTAAGGAACTTGAAGACAAGATC
AAGGAGCAAGAACAACAGTTAGCATGCATGGTTGCAGATTCTGATGCCACCAAGTCTTCA
AGATCAAGCCCACTTGAAAGCAGCAAATGTTCTAGCAGAGACGATTTAACAAGTGACATT
GAGCAACGTATTTTGAAGAGCTCAAATGCTATCAACCGTCAGGCAAGTCAGGGGTCTAAT
TTGCTGAAGGGAAAGGACACAGTCCAACAAGTTAGGCGAAAGCGTTTGTCAACTAATAGT
GAAGCAGAGAACAACGGTGTGTTGCCAACTTCGATACATGACAGGACTGAACAGGATTAC
CTTCAAGAGGCCAGAAGGAAACGTTTGTCTAGAAATGGTGAAGTAGAGAAAAATGTTACT
CCTGCCATATCAGCTAACGATAGAAGGACCAGGCAATCTGATCCCCCTAGACCAGTTACA
AGAGGAATGAAGCCAACTACCACAACTGCCACCAATGCTCAAAGGCCATTGATTCGTAAC
AAAGCGAGCAGAGAGACCGTTCAGGCAGTTAAAGAGAGGGACGCCAAGAAAAGGATGTGG
ACAAGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400028283
PEP Infomation

pacid=37467593 transcript=PGSC0003DMT400041748 locus=PGSC0003DMG400016188 ID=PGSC0003DMT400041748.v4.03 annot-version=v4.03
Sequence

MDDIQFNPFEQNPETPFPDLPSNFEWEEKPLHQETAVSAIDQDENFQFLADSMVCDSGSR
LIPSGFTRSSCTEDLVLFVNAGSETSVELDSSLSFLADNFYQGGEPFQTEEFITEGGEHA
FIYQSARLGNFCYQIDNLTPGNYFIDLHFVEIINVNGPKGMRVFNVFLQDEKVLSDFDIF
SVVGANKPLQFVDSRVSIKENGILLIKFEGIIGSPVVSGICIRKAPKASASQAEHDRLTC
KNCATEIDFPSAQKKVARLQSTAKYENKIQELGELLKRKTDECYQSWMSYTAANQQLEKV
RMELDNKTFHTYSLDQKFEEQAKTITEISTKYERDKNYWHMAINDLEMKVKIMKQEHSQL
SRDAHECTDSIPDLNKMVSAVQSLVEQYEDLKMKYNDEQAKRRKLFNEVQEAKGNIRVFC
RCRPLSKAEVSDGCSTVIDFDVAKDGELGILNGSSTKKTFKFDRVYTPRDDQGDVYADAS
PMVISVLDGYNVCIFAYGQTGTGKTFTMEGTKGNRGVNYRTLEELFKIAKERNETFTYDI
SVSVLEVYNEQIRDLLAPPTTSKKLEIKQAPEGLHHIPGLVEAKVENIEEVWNVLQTGSS
ARAVGSNNVNEHSSRSHCMLCIMVTAKNLIDGECTKSKLWLVDLAGSERLAKTDVQGERL
KEAQNINRSLSALGDVISALANRSSHIPYRNSKLTHLLQDSLGGDSKALMFVQISPSDKD
LSETISSLNFATRVRGVELGPVRKQVDTGEIQKLKTMLDRAKQETKSKDESLKKLEESLQ
NLESKAKGKEHVNKTQQDKIKELESQLNLKTSLHGQSEKQLSQLSERLKGREETCATLQQ
KISELENKMRQQQQFESESFNNKVKDLEDKLKEREHEFVSQSDILQHKVEELEETLKAKE
QNAQECILLRQKIKELEDKIKEQEQQLACMVADSDATKSSRSSPLESSKCSSRDDLTSDI
EQRILKSSNAINRQASQGSNLLKGKDTVQQVRRKRLSTNSEAENNGVLPTSIHDRTEQDY
LQEARRKRLSRNGEVEKNVTPAISANDRRTRQSDPPRPVTRGMKPTTTTATNAQRPLIRN
KASRETVQAVKERDAKKRMWTR*

Transcript Sequence

Transcript ID

PGSC0003DMT400041748
Transcript Infomation

pacid=37467593 locus=PGSC0003DMG400016188 ID=PGSC0003DMT400041748.v4.03 annot-version=v4.03
Sequence

ATGGATGACATTCAATTTAACCCTTTTGAGCAAAACCCAGAAACCCCTTTTCCAGATTTA
CCCAGTAATTTTGAATGGGAAGAAAAACCCTTGCATCAAGAAACTGCAGTTTCTGCCATT
GACCAAGATGAAAATTTTCAATTTTTAGCCGATTCGATGGTCTGTGACTCGGGTTCAAGA
CTAATCCCAAGTGGGTTTACTAGATCCAGCTGTACAGAGGACCTTGTGCTTTTTGTTAAT
GCTGGATCGGAGACGTCAGTGGAGTTGGACTCCAGTCTGAGCTTTCTGGCTGACAATTTT
TACCAAGGTGGAGAACCATTTCAAACGGAGGAGTTCATTACAGAGGGAGGTGAACATGCT
TTCATTTACCAGTCAGCAAGATTAGGAAACTTCTGTTATCAGATTGACAATCTTACACCA
GGAAATTACTTTATTGATCTTCATTTTGTCGAGATAATAAATGTAAATGGGCCTAAAGGA
ATGCGAGTGTTCAATGTCTTTCTACAAGATGAGAAGGTTCTGTCTGATTTTGACATCTTC
TCTGTTGTTGGAGCCAATAAACCGCTACAATTTGTTGACTCAAGGGTTTCCATCAAAGAG
AATGGGATACTTTTGATAAAATTTGAAGGAATTATTGGCAGTCCCGTGGTTAGTGGAATT
TGCATAAGAAAAGCTCCAAAAGCATCAGCTTCTCAAGCAGAACATGATCGTCTTACATGC
AAAAACTGTGCAACCGAGATAGATTTTCCATCAGCACAGAAAAAAGTGGCACGATTGCAG
TCAACAGCCAAGTATGAGAATAAGATACAGGAGCTTGGTGAATTGTTGAAGCGCAAGACA
GATGAATGTTATCAATCTTGGATGTCTTATACTGCAGCTAACCAGCAACTAGAGAAGGTT
AGGATGGAGCTGGACAATAAGACATTTCATACCTACTCACTTGATCAGAAATTCGAGGAG
CAAGCTAAGACTATTACAGAAATCTCAACCAAGTACGAGCGCGACAAGAACTATTGGCAC
ATGGCAATCAATGATCTCGAGATGAAAGTAAAGATAATGAAGCAGGAGCACTCCCAGCTC
TCTCGCGATGCGCACGAGTGTACAGACTCAATCCCTGATCTGAATAAAATGGTCTCGGCA
GTTCAGTCACTGGTTGAGCAATATGAAGATCTTAAGATGAAGTACAACGACGAGCAAGCT
AAGAGAAGAAAGCTCTTCAATGAAGTTCAAGAGGCAAAAGGGAATATCAGAGTATTTTGC
CGCTGCCGTCCATTAAGCAAAGCTGAAGTCTCAGATGGATGCTCAACGGTCATAGACTTT
GATGTCGCCAAGGATGGAGAACTTGGAATCTTAAATGGCAGCTCCACGAAAAAGACATTT
AAATTTGACCGTGTCTACACACCCAGAGATGATCAAGGTGATGTCTATGCCGATGCTTCA
CCAATGGTCATTTCAGTTTTAGATGGTTACAACGTATGTATCTTTGCTTATGGACAAACG
GGAACGGGAAAAACGTTCACCATGGAGGGTACAAAAGGAAACAGAGGAGTCAACTATCGG
ACTCTTGAAGAATTGTTTAAAATTGCGAAGGAGAGGAATGAAACTTTCACCTATGACATA
TCAGTCAGTGTGCTTGAAGTCTACAATGAACAGATCAGGGACCTATTAGCTCCACCGACA
ACATCAAAAAAGTTGGAGATAAAACAAGCTCCGGAAGGGCTTCATCACATTCCAGGACTT
GTGGAAGCCAAAGTAGAAAATATAGAAGAAGTCTGGAATGTGCTGCAGACTGGAAGTAGT
GCACGGGCTGTTGGATCCAACAATGTGAATGAGCACAGTAGCCGTTCTCACTGCATGCTT
TGTATTATGGTAACAGCCAAGAACTTGATCGACGGTGAATGCACAAAGAGCAAGCTTTGG
CTTGTGGATTTAGCTGGTAGTGAGAGGCTTGCGAAGACTGATGTCCAAGGTGAGAGACTG
AAGGAAGCTCAAAATATCAATAGGTCACTTTCCGCTCTAGGAGATGTGATATCAGCTTTA
GCAAATAGAAGCAGCCATATTCCATACAGAAACTCCAAGTTGACACATCTACTCCAAGAT
TCATTAGGTGGGGATTCAAAAGCATTGATGTTTGTACAGATCAGCCCGTCTGATAAGGAC
TTAAGTGAAACTATAAGTTCATTGAACTTTGCTACAAGAGTTAGAGGAGTTGAGTTAGGT
CCTGTAAGAAAACAAGTTGATACCGGCGAGATCCAAAAGTTGAAAACCATGCTTGACAGA
GCGAAGCAGGAAACTAAATCTAAAGACGAATCCTTGAAGAAACTTGAGGAAAGCCTACAG
AACTTAGAGAGTAAGGCTAAAGGGAAGGAACATGTTAACAAAACTCAACAGGATAAGATT
AAGGAACTGGAAAGCCAGCTCAATTTAAAGACATCATTACATGGCCAATCGGAAAAACAA
CTTTCACAGCTTTCAGAGAGGTTGAAGGGACGTGAAGAAACTTGTGCTACTCTTCAACAG
AAGATCTCAGAGCTAGAGAACAAGATGAGACAGCAGCAGCAATTTGAGTCTGAAAGCTTC
AACAATAAGGTCAAGGATCTCGAGGACAAGCTAAAAGAGCGAGAGCACGAGTTTGTGTCT
CAGTCTGACATCCTTCAACATAAGGTTGAAGAGCTTGAGGAAACGCTGAAAGCAAAAGAA
CAGAACGCACAGGAGTGCATTCTACTCCGTCAGAAGATTAAGGAACTTGAAGACAAGATC
AAGGAGCAAGAACAACAGTTAGCATGCATGGTTGCAGATTCTGATGCCACCAAGTCTTCA
AGATCAAGCCCACTTGAAAGCAGCAAATGTTCTAGCAGAGACGATTTAACAAGTGACATT
GAGCAACGTATTTTGAAGAGCTCAAATGCTATCAACCGTCAGGCAAGTCAGGGGTCTAAT
TTGCTGAAGGGAAAGGACACAGTCCAACAAGTTAGGCGAAAGCGTTTGTCAACTAATAGT
GAAGCAGAGAACAACGGTGTGTTGCCAACTTCGATACATGACAGGACTGAACAGGATTAC
CTTCAAGAGGCCAGAAGGAAACGTTTGTCTAGAAATGGTGAAGTAGAGAAAAATGTTACT
CCTGCCATATCAGCTAACGATAGAAGGACCAGGCAATCTGATCCCCCTAGACCAGTTACA
AGAGGAATGAAGCCAACTACCACAACTGCCACCAATGCTCAAAGGCCATTGATTCGTAAC
AAAGCGAGCAGAGAGACCGTTCAGGCAGTTAAAGAGAGGGACGCCAAGAAAAGGATGTGG
ACAAGATAG