Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041729
CDS Infomation

pacid=37466204 polypeptide=PGSC0003DMP400028271 locus=PGSC0003DMG400016181 ID=PGSC0003DMT400041729.v4.03 annot-version=v4.03
Sequence

ATGCTGAGCATCAGAGTACCAGCAACCATTTCTTCATCTTCAACTCTTTTCTTTACAAAT
TCCAAAAAATTATCAAATAAATTCTCTTACATTTCAAATCCATTGAACAATTCTTCAAAA
CCCATTAAATGGAATTGTAAAAATTCAAGAATGGAGTCATCAAAATCAAGTTTTGTTACC
AAAGCTTCAGCACAGCCACTTACAAATCCTGCAGAACTCATTGATTCTGTTGAAACTTTC
ATCTTTGATTGTGATGGAGTCATATGGAAAGGAGATAAACTGATAGACGGAGTCCCTGAA
ACTTTGGATTTGCTCAGGGAAAAGGGAAAGAGATTAGTTTTTGTTACCAACAACTCAACA
AAGTCTAGAAAGCAGTACGGGAAAAAATTTGAAACACTTGGTCTTAGTGTCAACGAGGAG
GAAATTTTTGCTTCATCCTTTGCTGCAGCTGCTTATTTGAAGTCTATTGACTTCCCAAAA
GATAAAAAGGTGTACGTTGTTGGTGAGGATGGCATCTTGAAGGAGCTTGAGTTAGCTGGT
ATTCAATATCTTGGAGGACCGGAAGACGGTGACAAGAAAATAGAGCTAAAGCCTGGATAT
ATGATGGAGCAAGATAAGGATGTCGGAGCTGTTGTTGTTGGATTTGACCGCTATTTCAAC
TACCACAAGATTCAGTATGCTACCTTGTGCATACGTGAAAATCCAGGATGTCTCTTTATT
GCTACAAATCGTGATGCTGTTACCCATCTTACAGATGCTCAAGAATGGGCAGGTGGTGGT
TCAATGGTTGGTGCGATCCTAGGCTCTACAAAGTGTGAACCTCTTGTTGTAGGAAAACCC
TCGACCTTCATGATGGACTACTTGGCTGATAAGTTTAAGATACAGAAGTCGCAGATATGC
ATGGTCGGTGACAGATTGGATACAGATATAGTGTTTGGACAAAATGGTGGCTGCAAAACT
CTTCTGGTTCTCTCAGGCGTGACATCTTTATCGATGCTTCAAGATCCCAACAACTCTACA
CAACCAGATTTCTACGCCAACAAGATTTCTGATTTCCTCTCTATTAAAGCGGCTGCAGTT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400028271
PEP Infomation

pacid=37466204 transcript=PGSC0003DMT400041729 locus=PGSC0003DMG400016181 ID=PGSC0003DMT400041729.v4.03 annot-version=v4.03
Sequence

MLSIRVPATISSSSTLFFTNSKKLSNKFSYISNPLNNSSKPIKWNCKNSRMESSKSSFVT
KASAQPLTNPAELIDSVETFIFDCDGVIWKGDKLIDGVPETLDLLREKGKRLVFVTNNST
KSRKQYGKKFETLGLSVNEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAG
IQYLGGPEDGDKKIELKPGYMMEQDKDVGAVVVGFDRYFNYHKIQYATLCIRENPGCLFI
ATNRDAVTHLTDAQEWAGGGSMVGAILGSTKCEPLVVGKPSTFMMDYLADKFKIQKSQIC
MVGDRLDTDIVFGQNGGCKTLLVLSGVTSLSMLQDPNNSTQPDFYANKISDFLSIKAAAV
*

Transcript Sequence

Transcript ID

PGSC0003DMT400041729
Transcript Infomation

pacid=37466204 locus=PGSC0003DMG400016181 ID=PGSC0003DMT400041729.v4.03 annot-version=v4.03
Sequence

ATGCTGAGCATCAGAGTACCAGCAACCATTTCTTCATCTTCAACTCTTTTCTTTACAAAT
TCCAAAAAATTATCAAATAAATTCTCTTACATTTCAAATCCATTGAACAATTCTTCAAAA
CCCATTAAATGGAATTGTAAAAATTCAAGAATGGAGTCATCAAAATCAAGTTTTGTTACC
AAAGCTTCAGCACAGCCACTTACAAATCCTGCAGAACTCATTGATTCTGTTGAAACTTTC
ATCTTTGATTGTGATGGAGTCATATGGAAAGGAGATAAACTGATAGACGGAGTCCCTGAA
ACTTTGGATTTGCTCAGGGAAAAGGGAAAGAGATTAGTTTTTGTTACCAACAACTCAACA
AAGTCTAGAAAGCAGTACGGGAAAAAATTTGAAACACTTGGTCTTAGTGTCAACGAGGAG
GAAATTTTTGCTTCATCCTTTGCTGCAGCTGCTTATTTGAAGTCTATTGACTTCCCAAAA
GATAAAAAGGTGTACGTTGTTGGTGAGGATGGCATCTTGAAGGAGCTTGAGTTAGCTGGT
ATTCAATATCTTGGAGGACCGGAAGACGGTGACAAGAAAATAGAGCTAAAGCCTGGATAT
ATGATGGAGCAAGATAAGGATGTCGGAGCTGTTGTTGTTGGATTTGACCGCTATTTCAAC
TACCACAAGATTCAGTATGCTACCTTGTGCATACGTGAAAATCCAGGATGTCTCTTTATT
GCTACAAATCGTGATGCTGTTACCCATCTTACAGATGCTCAAGAATGGGCAGGTGGTGGT
TCAATGGTTGGTGCGATCCTAGGCTCTACAAAGTGTGAACCTCTTGTTGTAGGAAAACCC
TCGACCTTCATGATGGACTACTTGGCTGATAAGTTTAAGATACAGAAGTCGCAGATATGC
ATGGTCGGTGACAGATTGGATACAGATATAGTGTTTGGACAAAATGGTGGCTGCAAAACT
CTTCTGGTTCTCTCAGGCGTGACATCTTTATCGATGCTTCAAGATCCCAACAACTCTACA
CAACCAGATTTCTACGCCAACAAGATTTCTGATTTCCTCTCTATTAAAGCGGCTGCAGTT
TGA