Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041713
CDS Infomation

pacid=37465332 polypeptide=PGSC0003DMP400028258 locus=PGSC0003DMG400016172 ID=PGSC0003DMT400041713.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAAGAGCAATATTGAGAAGGAAGAGGAACCTCTTTGATTCTACTCCGAAACCT
CATACCTTCATTCGAGGTTTTTCGAGCTATGAGAACTGGGGATCATCTAAGGCGTCTAAT
TCTTGGGATTGGTGCTCTACGGTAACTCATCAACCTCAGAATGCAGATAACAGAAATGAA
GGAAGTTCATATCCGTCAACCAAAGATGAGTTACTAAAAGTTTGGGGAAAGCATGTCCTA
TTCAACTCATCTGAAATTCCAGCCTTGGGTTTGAGAGTTGGAAGATGTGGGTCTCTTCCT
ACTTTGGGGGGCAGGTGGATAATACACCAACAACGATATTCGACAGCTGCAGCAGGTCAA
CCTGATTTTGGTAAAGGGAATGATAAGGATGCAGAACCAGCTGTTAAACAGAAGAAAGAA
GCTTCACCAGAAGAATGCGATGAAGCAGTTGAAGATTTAACCATGGCCAAAGCCAAAGCA
AAAGCCAAACAGCTTCAAGATTCACAGATCAGTATTAAACCTGTACTAAAGAAAATTTGG
GCAATGCTATTAGGGATTGGTCCTGCTTTGAGAGCTGTTGCTTCAATGAGCAGGGAAGAC
TGGGCAAAGAAGATCCGGCACTGGAAGGATGAATTTAAATCAACTATGCAACACTATTGG
TTGGGTACCAAACTGCTTTGGGCTGATGTTAGGATATGTTCCAGGCTCTTGTTGAAAACA
GCTAAGGGGAAGAGTCTTTCCAGGAGGGAAAGGCAACAACTAACACGGACAACAGCTGAT
ATTTTTAGGCTGGTTCCTGTTGCAGTGTTTATTATTGTTCCATTTATGGAGTTCTTGTTG
CCAGTATTCTTGGCAGTGTTTCCCAACATGCTGCCGTCAACCTTCCAAGATAAGATGAAA
GAAGAGGAGGCTCTGAAAAGGAAGCTGAATGCTAGGATCGAATATGCAAAGTTTCTACAA
GAAACAGTCAAAGAGATGGCAAAGGAAGTTAAAAACTCGCGAAGCGGAGAACTAAAGAAT
ACAGCTGAGGATCTTGATGAATTCATGAATAAGGTCAGAAGGGGTGCTAGTGTATCTAAT
GAGGAAATTTTAGGATTTGCCAAGCTTTTCAATGATGAGCTCACTCTGGATAATATCAGC
AGACCGAGGTTGGTGAATATGTGCAAATATATGGGTATTAACCCCTTTGGAACTGATGCA
TACTTGCGGTTCATGCTTCGAAAGAGGCTCCAAAAGATTAAGAACGATGACAAGATGATT
CAAGCAGAGGGTGTAGAGTCCCTTTCGGAGGATGAGCTCCGTCAAGCCTGTCGAGAACGA
GGCTTACTTGGATTACTCTCAGTAGAAGAAATGCAACAGCAGTTGCGAGATTGGCTGGAC
TTATCGCTCAACCATTCAGTGCCATCTTCTTTGTTAATCCTTTCTAGAGCCTTCACAGTG
TCGGGCAAAGTAAAACCGGAGGAAGCTGTTCAAGCTACACTTTCATCACTGCCAGATGAG
GTGGTGGACACTGTTCAAGTTACATCTATGCCATCTGAAGATGCTCTTGCTGAAAAGAAG
AGAAAGCTAGAATACTTAGAAATGGAGGAAGAGCTCATCAAGGAGGAGGAAGAGGAAGAA
GAAGAAGAGCAGGCTAAGATGAAAGATAAACAGAAGGATGTAGCTTTGGAAGAGATGACT
CTTGCAACAGCTAAAGAAGCAGAAGAACTAAAGAAAACAAAAACTTTGGATCAACAAGAG
CAGCTTTGTGAGCTTAGTCGTGCAATTGCTGTTTTATCATCAGCTTCTTCCGTAAGCCTG
GAGCGTCAGGAGTTTTTGAGACTTGTCAAAAAAGAGATTGAGTTGTACAATAGCATGGTG
GATAAAGGTGGCCCTGAAGGTGAAGAAGAAGCCCGAAAGGCATATAAAGCAGCTAGGGAG
GAGGACAGTGACCACACTAAAGAAAGGACTGTAGATGATAAAGTTTCTTCAGCACTTATT
AATAGGGTTGATGCAATGCTCCAAAAACTTGAAAAGGAAATTGATGATGTGGATGCCAAG
ATTGGTGATCGTTGGCGGTTACTGGATAGGGATTATGACGGAAAAGTCACTCCAGAGGAG
GTGGCATCTGCTGCTTCATACCTCAAGGATACATTGGCGAAGGAGGGTATTCAGGAGCTC
ATAACCAACCTTTCCAAGGACAGAGAAGGAAAAATCCTTGTCCAAGATCTGGTGAAGTTA
GCCAGTGAAATAGAACATGCTGAAGAGGAGGAAACTACAGAAGAGGAAAAAACTCAAAAA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400028258
PEP Infomation

pacid=37465332 transcript=PGSC0003DMT400041713 locus=PGSC0003DMG400016172 ID=PGSC0003DMT400041713.v4.03 annot-version=v4.03
Sequence

MASRAILRRKRNLFDSTPKPHTFIRGFSSYENWGSSKASNSWDWCSTVTHQPQNADNRNE
GSSYPSTKDELLKVWGKHVLFNSSEIPALGLRVGRCGSLPTLGGRWIIHQQRYSTAAAGQ
PDFGKGNDKDAEPAVKQKKEASPEECDEAVEDLTMAKAKAKAKQLQDSQISIKPVLKKIW
AMLLGIGPALRAVASMSREDWAKKIRHWKDEFKSTMQHYWLGTKLLWADVRICSRLLLKT
AKGKSLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFLAVFPNMLPSTFQDKMK
EEEALKRKLNARIEYAKFLQETVKEMAKEVKNSRSGELKNTAEDLDEFMNKVRRGASVSN
EEILGFAKLFNDELTLDNISRPRLVNMCKYMGINPFGTDAYLRFMLRKRLQKIKNDDKMI
QAEGVESLSEDELRQACRERGLLGLLSVEEMQQQLRDWLDLSLNHSVPSSLLILSRAFTV
SGKVKPEEAVQATLSSLPDEVVDTVQVTSMPSEDALAEKKRKLEYLEMEEELIKEEEEEE
EEEQAKMKDKQKDVALEEMTLATAKEAEELKKTKTLDQQEQLCELSRAIAVLSSASSVSL
ERQEFLRLVKKEIELYNSMVDKGGPEGEEEARKAYKAAREEDSDHTKERTVDDKVSSALI
NRVDAMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAASYLKDTLAKEGIQEL
ITNLSKDREGKILVQDLVKLASEIEHAEEEETTEEEKTQK*

Transcript Sequence

Transcript ID

PGSC0003DMT400041713
Transcript Infomation

pacid=37465332 locus=PGSC0003DMG400016172 ID=PGSC0003DMT400041713.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAAGAGCAATATTGAGAAGGAAGAGGAACCTCTTTGATTCTACTCCGAAACCT
CATACCTTCATTCGAGGTTTTTCGAGCTATGAGAACTGGGGATCATCTAAGGCGTCTAAT
TCTTGGGATTGGTGCTCTACGGTAACTCATCAACCTCAGAATGCAGATAACAGAAATGAA
GGAAGTTCATATCCGTCAACCAAAGATGAGTTACTAAAAGTTTGGGGAAAGCATGTCCTA
TTCAACTCATCTGAAATTCCAGCCTTGGGTTTGAGAGTTGGAAGATGTGGGTCTCTTCCT
ACTTTGGGGGGCAGGTGGATAATACACCAACAACGATATTCGACAGCTGCAGCAGGTCAA
CCTGATTTTGGTAAAGGGAATGATAAGGATGCAGAACCAGCTGTTAAACAGAAGAAAGAA
GCTTCACCAGAAGAATGCGATGAAGCAGTTGAAGATTTAACCATGGCCAAAGCCAAAGCA
AAAGCCAAACAGCTTCAAGATTCACAGATCAGTATTAAACCTGTACTAAAGAAAATTTGG
GCAATGCTATTAGGGATTGGTCCTGCTTTGAGAGCTGTTGCTTCAATGAGCAGGGAAGAC
TGGGCAAAGAAGATCCGGCACTGGAAGGATGAATTTAAATCAACTATGCAACACTATTGG
TTGGGTACCAAACTGCTTTGGGCTGATGTTAGGATATGTTCCAGGCTCTTGTTGAAAACA
GCTAAGGGGAAGAGTCTTTCCAGGAGGGAAAGGCAACAACTAACACGGACAACAGCTGAT
ATTTTTAGGCTGGTTCCTGTTGCAGTGTTTATTATTGTTCCATTTATGGAGTTCTTGTTG
CCAGTATTCTTGGCAGTGTTTCCCAACATGCTGCCGTCAACCTTCCAAGATAAGATGAAA
GAAGAGGAGGCTCTGAAAAGGAAGCTGAATGCTAGGATCGAATATGCAAAGTTTCTACAA
GAAACAGTCAAAGAGATGGCAAAGGAAGTTAAAAACTCGCGAAGCGGAGAACTAAAGAAT
ACAGCTGAGGATCTTGATGAATTCATGAATAAGGTCAGAAGGGGTGCTAGTGTATCTAAT
GAGGAAATTTTAGGATTTGCCAAGCTTTTCAATGATGAGCTCACTCTGGATAATATCAGC
AGACCGAGGTTGGTGAATATGTGCAAATATATGGGTATTAACCCCTTTGGAACTGATGCA
TACTTGCGGTTCATGCTTCGAAAGAGGCTCCAAAAGATTAAGAACGATGACAAGATGATT
CAAGCAGAGGGTGTAGAGTCCCTTTCGGAGGATGAGCTCCGTCAAGCCTGTCGAGAACGA
GGCTTACTTGGATTACTCTCAGTAGAAGAAATGCAACAGCAGTTGCGAGATTGGCTGGAC
TTATCGCTCAACCATTCAGTGCCATCTTCTTTGTTAATCCTTTCTAGAGCCTTCACAGTG
TCGGGCAAAGTAAAACCGGAGGAAGCTGTTCAAGCTACACTTTCATCACTGCCAGATGAG
GTGGTGGACACTGTTCAAGTTACATCTATGCCATCTGAAGATGCTCTTGCTGAAAAGAAG
AGAAAGCTAGAATACTTAGAAATGGAGGAAGAGCTCATCAAGGAGGAGGAAGAGGAAGAA
GAAGAAGAGCAGGCTAAGATGAAAGATAAACAGAAGGATGTAGCTTTGGAAGAGATGACT
CTTGCAACAGCTAAAGAAGCAGAAGAACTAAAGAAAACAAAAACTTTGGATCAACAAGAG
CAGCTTTGTGAGCTTAGTCGTGCAATTGCTGTTTTATCATCAGCTTCTTCCGTAAGCCTG
GAGCGTCAGGAGTTTTTGAGACTTGTCAAAAAAGAGATTGAGTTGTACAATAGCATGGTG
GATAAAGGTGGCCCTGAAGGTGAAGAAGAAGCCCGAAAGGCATATAAAGCAGCTAGGGAG
GAGGACAGTGACCACACTAAAGAAAGGACTGTAGATGATAAAGTTTCTTCAGCACTTATT
AATAGGGTTGATGCAATGCTCCAAAAACTTGAAAAGGAAATTGATGATGTGGATGCCAAG
ATTGGTGATCGTTGGCGGTTACTGGATAGGGATTATGACGGAAAAGTCACTCCAGAGGAG
GTGGCATCTGCTGCTTCATACCTCAAGGATACATTGGCGAAGGAGGGTATTCAGGAGCTC
ATAACCAACCTTTCCAAGGACAGAGAAGGAAAAATCCTTGTCCAAGATCTGGTGAAGTTA
GCCAGTGAAATAGAACATGCTGAAGAGGAGGAAACTACAGAAGAGGAAAAAACTCAAAAA
TAA