Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041690
CDS Infomation

pacid=37464482 polypeptide=PGSC0003DMP400028239 locus=PGSC0003DMG400016164 ID=PGSC0003DMT400041690.v4.03 annot-version=v4.03
Sequence

ATGGAACTGTTCCTTGCAATTCTGATATTAGCATGTCTCTACTCATCTGTCTCACCTGAT
CAGCAGGGAGATGCACTGTTTGCATTGAAGAGTTCACTAAATGCTTCAAATGATCAACTT
TCTGATTGGAATCAGAATCAAGTTAATCCATGCACTTGGTCAAAGATAACTTGTGACGAT
AACAGCAATGTCTTGATGGTGTCGTTGTCAAATATGGGGTTCACTGGCACTTTAACTCCA
AGATTAGGTGTTCTAGTGCATCTTAATACTCTTTCTTTGCAAGGAAATGGAATAACTGGT
AAAATTCCTGAAGCATTAGGAAATTTAACCAGCTTGACCATGTTGGATCTGGAAAAAAAC
AGTTTGTCAGGAGAAATACCAGCTTCCCTAGGCAATCTAAAAAAGCTTCAATTTCTGTTT
TTGAGTCAAAACAATCTGTCTGGGACTATCCCTGAGTCACTTTCAGGCCTTCCCAACTTG
ATTAACCTTCAGCTTGCATTAAATGATCTTACTGGAAAAGTTCCTGACAGTTTGTTCCAA
GTCCCGAAATACAATTTTTCAGAGAACCATTTGAATTGTGGCTTAAACTTCAGTCGTCGT
TGTGTATCTGACAGTGAAGGTTCTCCCAGTAAATCAAAGACTGGTCTCGTAATTGGTATC
GTTGGTGGATTTCTTGGAATTATCCTTCTTGGGGGATTAATGTTATTTTTCTGGCGGGGG
AGGCACAAAGGCTACAAACGTGAAATCTATGTTGATGTTCCAGGTGAGGTTGACAGACGA
ATTCCATTTGGTCAATTGAGGAGATTCGCATGGAGGGAATTGCAACTCGCTACTGATAAC
TTTAGTGAAAAGAATGTTCTTGGACAGGGAGGTTTTGGCAAGGTTTATAAAGGAGTGCTC
AGTGACAGCACTAAAGTTGCTGTGAAACGCTTAACTGACTATGAGAGTCCTGGGGGAGAT
GCTGCATTTCAGCGTGAAGTTGAGATGATTAGTGTTGCTGTTCATAGAAATCTTTTGCGG
CTTATAGGATTTTGCACCACACCGACTGAACGCTTGCTAGTGTACCCGTATATGCAGAAC
CTAAGTGTTGCCTATCGTCTACGAGAACTTAAACCTGGGGAGTCTGTTTTAATTTGGCCA
ACCAGAAAGCGTGTGGCACTGGGCACTGCACGTGGACTTGAATACCTGCACGAACACTGT
AATCCAAAAATTATTCACCGTGATGTTAAAGCAGCCAATGTTTTACTGGATGAAGATTTC
GAGGCTGTAGTTGGTGATTTTGGCCTGGCAAAGTTAGTTGATGTTAGGAAAACCAACGTG
ACAACGCAAGTTCGGGGTACTATGGGCCATATAGCTCCTGAATACTTGTCCACTGGGAAA
TCATCAGAAAAAACTGATGTTTTTGGATATGGAATCACGCTTTTGGAGATTGTAACTGGT
CAACGCGCTATAGACTTCTCACGCCTAGAAGAAGAAGATGATGTCTTGTTACTTGACCAT
GTCAAAAAACTGCAAAGGGAGAAAAGGTTGGATGCTATTGTCGACCGCAACCTACATAAG
AACTATAACATGGATGAAGTAGAGATGATGATTCAAGTTGCGTTGCTGTGTACTCAAGGA
TCACCAGAGGATCGTCCAGCAATGTCAGAGGTAGTACGAATGCTTGAAGGAGAAGGACTT
GCTGAGCGGTGGGAAGAGTGGCAGCATGTCGAAGTTACACGTAGGCAAGAATACGAGAGA
TTACAACGACGATTTGATTGGGGCGAAGATTCAATCTATAATCAAGATGCAGTTGAACTG
TCTGGTGGAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400028239
PEP Infomation

pacid=37464482 transcript=PGSC0003DMT400041690 locus=PGSC0003DMG400016164 ID=PGSC0003DMT400041690.v4.03 annot-version=v4.03
Sequence

MELFLAILILACLYSSVSPDQQGDALFALKSSLNASNDQLSDWNQNQVNPCTWSKITCDD
NSNVLMVSLSNMGFTGTLTPRLGVLVHLNTLSLQGNGITGKIPEALGNLTSLTMLDLEKN
SLSGEIPASLGNLKKLQFLFLSQNNLSGTIPESLSGLPNLINLQLALNDLTGKVPDSLFQ
VPKYNFSENHLNCGLNFSRRCVSDSEGSPSKSKTGLVIGIVGGFLGIILLGGLMLFFWRG
RHKGYKREIYVDVPGEVDRRIPFGQLRRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVL
SDSTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPYMQN
LSVAYRLRELKPGESVLIWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDF
EAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLEIVTG
QRAIDFSRLEEEDDVLLLDHVKKLQREKRLDAIVDRNLHKNYNMDEVEMMIQVALLCTQG
SPEDRPAMSEVVRMLEGEGLAERWEEWQHVEVTRRQEYERLQRRFDWGEDSIYNQDAVEL
SGGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400041690
Transcript Infomation

pacid=37464482 locus=PGSC0003DMG400016164 ID=PGSC0003DMT400041690.v4.03 annot-version=v4.03
Sequence

ATGGAACTGTTCCTTGCAATTCTGATATTAGCATGTCTCTACTCATCTGTCTCACCTGAT
CAGCAGGGAGATGCACTGTTTGCATTGAAGAGTTCACTAAATGCTTCAAATGATCAACTT
TCTGATTGGAATCAGAATCAAGTTAATCCATGCACTTGGTCAAAGATAACTTGTGACGAT
AACAGCAATGTCTTGATGGTGTCGTTGTCAAATATGGGGTTCACTGGCACTTTAACTCCA
AGATTAGGTGTTCTAGTGCATCTTAATACTCTTTCTTTGCAAGGAAATGGAATAACTGGT
AAAATTCCTGAAGCATTAGGAAATTTAACCAGCTTGACCATGTTGGATCTGGAAAAAAAC
AGTTTGTCAGGAGAAATACCAGCTTCCCTAGGCAATCTAAAAAAGCTTCAATTTCTGTTT
TTGAGTCAAAACAATCTGTCTGGGACTATCCCTGAGTCACTTTCAGGCCTTCCCAACTTG
ATTAACCTTCAGCTTGCATTAAATGATCTTACTGGAAAAGTTCCTGACAGTTTGTTCCAA
GTCCCGAAATACAATTTTTCAGAGAACCATTTGAATTGTGGCTTAAACTTCAGTCGTCGT
TGTGTATCTGACAGTGAAGGTTCTCCCAGTAAATCAAAGACTGGTCTCGTAATTGGTATC
GTTGGTGGATTTCTTGGAATTATCCTTCTTGGGGGATTAATGTTATTTTTCTGGCGGGGG
AGGCACAAAGGCTACAAACGTGAAATCTATGTTGATGTTCCAGGTGAGGTTGACAGACGA
ATTCCATTTGGTCAATTGAGGAGATTCGCATGGAGGGAATTGCAACTCGCTACTGATAAC
TTTAGTGAAAAGAATGTTCTTGGACAGGGAGGTTTTGGCAAGGTTTATAAAGGAGTGCTC
AGTGACAGCACTAAAGTTGCTGTGAAACGCTTAACTGACTATGAGAGTCCTGGGGGAGAT
GCTGCATTTCAGCGTGAAGTTGAGATGATTAGTGTTGCTGTTCATAGAAATCTTTTGCGG
CTTATAGGATTTTGCACCACACCGACTGAACGCTTGCTAGTGTACCCGTATATGCAGAAC
CTAAGTGTTGCCTATCGTCTACGAGAACTTAAACCTGGGGAGTCTGTTTTAATTTGGCCA
ACCAGAAAGCGTGTGGCACTGGGCACTGCACGTGGACTTGAATACCTGCACGAACACTGT
AATCCAAAAATTATTCACCGTGATGTTAAAGCAGCCAATGTTTTACTGGATGAAGATTTC
GAGGCTGTAGTTGGTGATTTTGGCCTGGCAAAGTTAGTTGATGTTAGGAAAACCAACGTG
ACAACGCAAGTTCGGGGTACTATGGGCCATATAGCTCCTGAATACTTGTCCACTGGGAAA
TCATCAGAAAAAACTGATGTTTTTGGATATGGAATCACGCTTTTGGAGATTGTAACTGGT
CAACGCGCTATAGACTTCTCACGCCTAGAAGAAGAAGATGATGTCTTGTTACTTGACCAT
GTCAAAAAACTGCAAAGGGAGAAAAGGTTGGATGCTATTGTCGACCGCAACCTACATAAG
AACTATAACATGGATGAAGTAGAGATGATGATTCAAGTTGCGTTGCTGTGTACTCAAGGA
TCACCAGAGGATCGTCCAGCAATGTCAGAGGTAGTACGAATGCTTGAAGGAGAAGGACTT
GCTGAGCGGTGGGAAGAGTGGCAGCATGTCGAAGTTACACGTAGGCAAGAATACGAGAGA
TTACAACGACGATTTGATTGGGGCGAAGATTCAATCTATAATCAAGATGCAGTTGAACTG
TCTGGTGGAAGATAA