Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041687
CDS Infomation

pacid=37465400 polypeptide=PGSC0003DMP400028236 locus=PGSC0003DMG400016162 ID=PGSC0003DMT400041687.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTTCCATTAACCTACTCATCTCTCCACCAAATTCACAATACTCATTCTGTTCT
CGCAATTCACTTTTCTTCTCTCCTTCAATTACAACATTTCGACGAACTCTTCCTTCGAAA
TCGTTATCAATTTCAGCTTCTTCTTCTTCGACGAGAGAATTAGAAGCTTTGATATTCGAT
TGCGATGGCGTAATTTTGGAATCCGAGCATCTTCATCGCCAAGCGTATAACGATGCTTTC
TCCCATTTCAATGTGCGATGCCCTGATAATGATGATGAGCCGCTGAATTGGAGCCTTGAG
TTCTATGATGTGCTACAGAATCAAATTGGAGGTGGAAAACCCAAAATGCGATGGTATTTT
AAGGAGCATGGTTGGCCTACTTCAACAATCTTTCAGCATTCTCCGGAGGATGACAACGAT
AGAGCCAGGCTGATTGATACTCTTCAAGATTGGAAGACTGAGAGGTACAAAGAGATAATC
AAATCTGGAACTGTTGAGCCGAGACCAGGAGTTTTAAGATTGATGGATGAGGCCAAGGCT
GCTGGTAAGATGCTCGCTGTCTGCTCTGCTGCAACCAAAAGTTCAGTTGTACTGTGTCTT
GAGAATCTTATAGGACTTGATCGGTTCCATGGTCTTGATTGCTTCCTTGCAGGTGATGAT
GTGAAAGAAAAAAAGCCTGATCCTTCAATATACATTACAGCTGCCAAGAAACTTGGCGTC
TCAGAAAGCAATTGTTTGGTGGTAGAGGATAGTGTCATCGGGCTACAGGTTCATCTCCCA
ATTCTCTGTAACTTATATTTTAAAGTTCTTTCGAGAGGCTGTGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028236
PEP Infomation

pacid=37465400 transcript=PGSC0003DMT400041687 locus=PGSC0003DMG400016162 ID=PGSC0003DMT400041687.v4.03 annot-version=v4.03
Sequence

MASSINLLISPPNSQYSFCSRNSLFFSPSITTFRRTLPSKSLSISASSSSTRELEALIFD
CDGVILESEHLHRQAYNDAFSHFNVRCPDNDDEPLNWSLEFYDVLQNQIGGGKPKMRWYF
KEHGWPTSTIFQHSPEDDNDRARLIDTLQDWKTERYKEIIKSGTVEPRPGVLRLMDEAKA
AGKMLAVCSAATKSSVVLCLENLIGLDRFHGLDCFLAGDDVKEKKPDPSIYITAAKKLGV
SESNCLVVEDSVIGLQVHLPILCNLYFKVLSRGCV*

Transcript Sequence

Transcript ID

PGSC0003DMT400041687
Transcript Infomation

pacid=37465400 locus=PGSC0003DMG400016162 ID=PGSC0003DMT400041687.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTTCCATTAACCTACTCATCTCTCCACCAAATTCACAATACTCATTCTGTTCT
CGCAATTCACTTTTCTTCTCTCCTTCAATTACAACATTTCGACGAACTCTTCCTTCGAAA
TCGTTATCAATTTCAGCTTCTTCTTCTTCGACGAGAGAATTAGAAGCTTTGATATTCGAT
TGCGATGGCGTAATTTTGGAATCCGAGCATCTTCATCGCCAAGCGTATAACGATGCTTTC
TCCCATTTCAATGTGCGATGCCCTGATAATGATGATGAGCCGCTGAATTGGAGCCTTGAG
TTCTATGATGTGCTACAGAATCAAATTGGAGGTGGAAAACCCAAAATGCGATGGTATTTT
AAGGAGCATGGTTGGCCTACTTCAACAATCTTTCAGCATTCTCCGGAGGATGACAACGAT
AGAGCCAGGCTGATTGATACTCTTCAAGATTGGAAGACTGAGAGGTACAAAGAGATAATC
AAATCTGGAACTGTTGAGCCGAGACCAGGAGTTTTAAGATTGATGGATGAGGCCAAGGCT
GCTGGTAAGATGCTCGCTGTCTGCTCTGCTGCAACCAAAAGTTCAGTTGTACTGTGTCTT
GAGAATCTTATAGGACTTGATCGGTTCCATGGTCTTGATTGCTTCCTTGCAGGTGATGAT
GTGAAAGAAAAAAAGCCTGATCCTTCAATATACATTACAGCTGCCAAGAAACTTGGCGTC
TCAGAAAGCAATTGTTTGGTGGTAGAGGATAGTGTCATCGGGCTACAGGTTCATCTCCCA
ATTCTCTGTAACTTATATTTTAAAGTTCTTTCGAGAGGCTGTGTGTAG