Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041676
CDS Infomation

pacid=37466746 polypeptide=PGSC0003DMP400028227 locus=PGSC0003DMG400016159 ID=PGSC0003DMT400041676.v4.03 annot-version=v4.03
Sequence

ATGTCAATCGTATCCCAGAACTTTTTCACAGCTCCACACACTCGTATCAATTTGTTTTGC
TTGAAGAACCCAAAAATTTCAACCCCATTACATCTAAAACCTTTGAAAACCCCTTTAATT
TTCCGTACACAAAAACCCCATTTGGACAAAATTGAGTTTTTGCAATGTCATCAATGGAAA
GTTAAGAGCTTTGATTCAGAGGGAACTGTAAATGGTCAAGTTTCAGCTGAGTATGAGTTT
AATTTTGATGGATTTCTTTCGATTCTTGAGTTTTTGTGTTTGTTATCTTCAGCTGTGGTA
GCTATTGGTTTTGCTGTGAATTCTTGGGTTTTGGGGTCTCAGAAGTGGTTGGGGAATAGG
GTATTAGCTGCACAGTGTGTTGTGTTGGTTGGTGGAGTGATCATTGGGTCTGTGATTAGG
AGAAGGCAATGGAGGAGGATTTGTATGAATAAGTTTTCCAGGTCTGGGAGTGATTTAAAA
GGGGTTAATTTGTTGGAAAGGATTGAGAAGGTAGAGGAAGATTTGAGGAGTTCAGCTACA
ATTATTCGGGTTCTATCGAGACAGCTGGAGAAGCTGGGAATTCGATTTCGGGTTACTAGA
AAAACTCTCAAAGATCCAATTACTGAGGCTGCAATGTTGGCCCAAAAGAACTCTGAGGCC
ACTCGAGCATTGGCATTGCAAGACGAGCGTCTGGAGAAGGAGCTTGGTGAAATACAAAAG
GTTCTGCTGGCAATGCAGGACCAGCAACACAAACAGCTTGAATTAATTCTTGCAATTGGG
AAAACTGGAAAGTTATTTGAGAACAAGCGAGGACTTAGTCAAGATCCAAATAAAAAATCA
AATGATGTGTCTAATACAGCCGCGGATGGATTTCCACAGTTGGGAGTGAATCAAATTCAA
GCTTTGAAGAGACAGCGGGAAACCAATAATGACAGAATCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028227
PEP Infomation

pacid=37466746 transcript=PGSC0003DMT400041676 locus=PGSC0003DMG400016159 ID=PGSC0003DMT400041676.v4.03 annot-version=v4.03
Sequence

MSIVSQNFFTAPHTRINLFCLKNPKISTPLHLKPLKTPLIFRTQKPHLDKIEFLQCHQWK
VKSFDSEGTVNGQVSAEYEFNFDGFLSILEFLCLLSSAVVAIGFAVNSWVLGSQKWLGNR
VLAAQCVVLVGGVIIGSVIRRRQWRRICMNKFSRSGSDLKGVNLLERIEKVEEDLRSSAT
IIRVLSRQLEKLGIRFRVTRKTLKDPITEAAMLAQKNSEATRALALQDERLEKELGEIQK
VLLAMQDQQHKQLELILAIGKTGKLFENKRGLSQDPNKKSNDVSNTAADGFPQLGVNQIQ
ALKRQRETNNDRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400041676
Transcript Infomation

pacid=37466746 locus=PGSC0003DMG400016159 ID=PGSC0003DMT400041676.v4.03 annot-version=v4.03
Sequence

ATGTCAATCGTATCCCAGAACTTTTTCACAGCTCCACACACTCGTATCAATTTGTTTTGC
TTGAAGAACCCAAAAATTTCAACCCCATTACATCTAAAACCTTTGAAAACCCCTTTAATT
TTCCGTACACAAAAACCCCATTTGGACAAAATTGAGTTTTTGCAATGTCATCAATGGAAA
GTTAAGAGCTTTGATTCAGAGGGAACTGTAAATGGTCAAGTTTCAGCTGAGTATGAGTTT
AATTTTGATGGATTTCTTTCGATTCTTGAGTTTTTGTGTTTGTTATCTTCAGCTGTGGTA
GCTATTGGTTTTGCTGTGAATTCTTGGGTTTTGGGGTCTCAGAAGTGGTTGGGGAATAGG
GTATTAGCTGCACAGTGTGTTGTGTTGGTTGGTGGAGTGATCATTGGGTCTGTGATTAGG
AGAAGGCAATGGAGGAGGATTTGTATGAATAAGTTTTCCAGGTCTGGGAGTGATTTAAAA
GGGGTTAATTTGTTGGAAAGGATTGAGAAGGTAGAGGAAGATTTGAGGAGTTCAGCTACA
ATTATTCGGGTTCTATCGAGACAGCTGGAGAAGCTGGGAATTCGATTTCGGGTTACTAGA
AAAACTCTCAAAGATCCAATTACTGAGGCTGCAATGTTGGCCCAAAAGAACTCTGAGGCC
ACTCGAGCATTGGCATTGCAAGACGAGCGTCTGGAGAAGGAGCTTGGTGAAATACAAAAG
GTTCTGCTGGCAATGCAGGACCAGCAACACAAACAGCTTGAATTAATTCTTGCAATTGGG
AAAACTGGAAAGTTATTTGAGAACAAGCGAGGACTTAGTCAAGATCCAAATAAAAAATCA
AATGATGTGTCTAATACAGCCGCGGATGGATTTCCACAGTTGGGAGTGAATCAAATTCAA
GCTTTGAAGAGACAGCGGGAAACCAATAATGACAGAATCTAG