Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041674
CDS Infomation

pacid=37466780 polypeptide=PGSC0003DMP400028225 locus=PGSC0003DMG400016157 ID=PGSC0003DMT400041674.v4.03 annot-version=v4.03
Sequence

ATGTCTACTGCCAACTTGATCGTCACAAACCATGAAGCGCAGCACTTCCCAAGCTGTCGT
TTAGATAGAAATTTTGCAAATGGTTCTGAGACGCAAACAGTGAGGGAATTAGATATTAAT
CAGCTTCAATTTGATCGTGTCTTGTGTGATGTTCCATGCAGTGGTGATGGCACTCTGCGC
AAGGCTCCTGATATATGGAGGAAATGGAATGCTGGAAATGGTAACGGTCTCCATGGGCTA
CAGATTCAGATAGCAATGCGAGGATTGTCTTTGCTTAAAGTAGGTGGAAGGATGGTTTAT
TCGACTTGCTCAATGAATCCCATAGAGAATGAGGCCGTGGTTGCTGAGATCTTACGGAGA
TGTGGGGAGTCCGTTGAACTAGTTGATGTGTCCAGTGAGGTTCCACAACTTGTTCGCAGG
CCAGGTCTTAAAAAATGGAAGGTTCGAGATAAAGGAGCGTGGTGGACTTCTTATAAAGAT
GTTCCTGAGGGTCGTAGAAATGCAATTGTTCCAGGGATGTTCCCGTCTGGCAAAACCTAT
TTGGATGCATCTGAGAAAAATGATGATGCAACTAGAGACCAATTGTCTGATAATGGAAAT
AATGCTAATGTCATTGAGGTGTTGGAAGATCCAGCAACTGCAGCTACGATCTCGGATGAG
GAAGTTTCAACTCTACCTCTGGAACGTTGTATGAGGATAGTGCCGCATGATCAGAATAGT
GGAGCCTTCTTTGTTTCCGTATTTCAAAAGCTCTCCCCTTTGCCGGCTGCAGCCTTTCAG
CAGAAGAAACCTGTGTCTTCGCGAGGGAAGCCAAATTCCAGTGATGTTATTCAAGCGGAA
AGTTTAACAACTAAGGTCAAAGAAGATGTGAATGTAGAGGATGTCAAGCCAGTGGATTCT
GTTGGTACCCAAGAAGTGACTATGGATGATGCTGATATTCAAGCTGAAAGTGTAACAACT
AAGGTCAAAGAAGATGAAAATACCGAGGATGTTAAGCCAGTGAATTCTGTTGGTAGCGAA
GATGTGACTATGGATGAGGCTGGCAATGGAACAGATGAAACTGCTTTGGATACTGAGCCC
AGTGAAATATTGGAGAAAACCGAGAAAGAGGAAACTCAACCTTCAACTGATACAAGAGCT
GAGCCCGAGACTGTGAGAGGGAAAAGAAAGTTACAAATGCAAGGCAAGTGGAGAGGGGTT
GACCCGGTTATATTTTACAAGGAGGAGGCAGTTGTGAGTAAGATAAAGGATTTCTACGGT
ATTAAGGAATCCTTTCTATTCGAAGGACATTTGATTACCAGGAATAGTGATATGAACCAT
GTCAAGAGAATTTATCATGTCTCAAAGTCTGTGAAGGAAGTTTTGCATCTCAATTTTCTA
GCTGGTCAGCAGCTTAAAATAGCTTCAGTTGGGCTCAAGATGTTTGTAAGTCTATCTGAA
TTTGACACTTCATTTCTCTTTGTGCGACTTTTCTCCAATTTGACACGTAACTTCTCTTCC
TGGGGATTTTATCACATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028225
PEP Infomation

pacid=37466780 transcript=PGSC0003DMT400041674 locus=PGSC0003DMG400016157 ID=PGSC0003DMT400041674.v4.03 annot-version=v4.03
Sequence

MSTANLIVTNHEAQHFPSCRLDRNFANGSETQTVRELDINQLQFDRVLCDVPCSGDGTLR
KAPDIWRKWNAGNGNGLHGLQIQIAMRGLSLLKVGGRMVYSTCSMNPIENEAVVAEILRR
CGESVELVDVSSEVPQLVRRPGLKKWKVRDKGAWWTSYKDVPEGRRNAIVPGMFPSGKTY
LDASEKNDDATRDQLSDNGNNANVIEVLEDPATAATISDEEVSTLPLERCMRIVPHDQNS
GAFFVSVFQKLSPLPAAAFQQKKPVSSRGKPNSSDVIQAESLTTKVKEDVNVEDVKPVDS
VGTQEVTMDDADIQAESVTTKVKEDENTEDVKPVNSVGSEDVTMDEAGNGTDETALDTEP
SEILEKTEKEETQPSTDTRAEPETVRGKRKLQMQGKWRGVDPVIFYKEEAVVSKIKDFYG
IKESFLFEGHLITRNSDMNHVKRIYHVSKSVKEVLHLNFLAGQQLKIASVGLKMFVSLSE
FDTSFLFVRLFSNLTRNFSSWGFYHI*

Transcript Sequence

Transcript ID

PGSC0003DMT400041674
Transcript Infomation

pacid=37466780 locus=PGSC0003DMG400016157 ID=PGSC0003DMT400041674.v4.03 annot-version=v4.03
Sequence

ATGTCTACTGCCAACTTGATCGTCACAAACCATGAAGCGCAGCACTTCCCAAGCTGTCGT
TTAGATAGAAATTTTGCAAATGGTTCTGAGACGCAAACAGTGAGGGAATTAGATATTAAT
CAGCTTCAATTTGATCGTGTCTTGTGTGATGTTCCATGCAGTGGTGATGGCACTCTGCGC
AAGGCTCCTGATATATGGAGGAAATGGAATGCTGGAAATGGTAACGGTCTCCATGGGCTA
CAGATTCAGATAGCAATGCGAGGATTGTCTTTGCTTAAAGTAGGTGGAAGGATGGTTTAT
TCGACTTGCTCAATGAATCCCATAGAGAATGAGGCCGTGGTTGCTGAGATCTTACGGAGA
TGTGGGGAGTCCGTTGAACTAGTTGATGTGTCCAGTGAGGTTCCACAACTTGTTCGCAGG
CCAGGTCTTAAAAAATGGAAGGTTCGAGATAAAGGAGCGTGGTGGACTTCTTATAAAGAT
GTTCCTGAGGGTCGTAGAAATGCAATTGTTCCAGGGATGTTCCCGTCTGGCAAAACCTAT
TTGGATGCATCTGAGAAAAATGATGATGCAACTAGAGACCAATTGTCTGATAATGGAAAT
AATGCTAATGTCATTGAGGTGTTGGAAGATCCAGCAACTGCAGCTACGATCTCGGATGAG
GAAGTTTCAACTCTACCTCTGGAACGTTGTATGAGGATAGTGCCGCATGATCAGAATAGT
GGAGCCTTCTTTGTTTCCGTATTTCAAAAGCTCTCCCCTTTGCCGGCTGCAGCCTTTCAG
CAGAAGAAACCTGTGTCTTCGCGAGGGAAGCCAAATTCCAGTGATGTTATTCAAGCGGAA
AGTTTAACAACTAAGGTCAAAGAAGATGTGAATGTAGAGGATGTCAAGCCAGTGGATTCT
GTTGGTACCCAAGAAGTGACTATGGATGATGCTGATATTCAAGCTGAAAGTGTAACAACT
AAGGTCAAAGAAGATGAAAATACCGAGGATGTTAAGCCAGTGAATTCTGTTGGTAGCGAA
GATGTGACTATGGATGAGGCTGGCAATGGAACAGATGAAACTGCTTTGGATACTGAGCCC
AGTGAAATATTGGAGAAAACCGAGAAAGAGGAAACTCAACCTTCAACTGATACAAGAGCT
GAGCCCGAGACTGTGAGAGGGAAAAGAAAGTTACAAATGCAAGGCAAGTGGAGAGGGGTT
GACCCGGTTATATTTTACAAGGAGGAGGCAGTTGTGAGTAAGATAAAGGATTTCTACGGT
ATTAAGGAATCCTTTCTATTCGAAGGACATTTGATTACCAGGAATAGTGATATGAACCAT
GTCAAGAGAATTTATCATGTCTCAAAGTCTGTGAAGGAAGTTTTGCATCTCAATTTTCTA
GCTGGTCAGCAGCTTAAAATAGCTTCAGTTGGGCTCAAGATGTTTGTAAGTCTATCTGAA
TTTGACACTTCATTTCTCTTTGTGCGACTTTTCTCCAATTTGACACGTAACTTCTCTTCC
TGGGGATTTTATCACATTTGA