Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041619
CDS Infomation

pacid=37465121 polypeptide=PGSC0003DMP400028180 locus=PGSC0003DMG400016133 ID=PGSC0003DMT400041619.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTGTGGGTTCTTTGCAGTTGTCCCATTATTTGGGGACTTGCAAGAACCATGAG
CGCCTTAAGAAATATTCACCTATACAGAACACACTTGGAAGGAGCAGGTGGCATTCTTGT
TGCACGAATCTGTCATCTTTTTCATCGCGGCAGGACTCTTGGAGTATCCATCACTTAAGA
GGATTGCAAGTGAAGAAACATGTGCTCCCATGTAGAAGCAATTTGTTCAAGTGTAATTCT
TTCCTAAAACCTGACCAAGCTTTTGACATTTCTGTAAAGAATGCTGCTATTATACTGAAA
AGATCATACAATAGCTTACAAGGAAGCCCACATCTGCTTAAGTTGCTTCCGGCAATTGGA
ATCCTTACTTTTGCAGTTTGGGGTCTTGCACCATTTCTGCGTCAAAGTAGAAATGTACTC
CTTCATAATGATAACAGCTGGGGAAAGAGTGGTACATATCATGTTATGACCTTTTATCTT
CAACCTTTGCTGTTGTGGACTGGGGCAATGCTTGTCTGCAGAGCATTAGACCCCATGGTG
CTACCAACAGAAGCTAGTCAAATTGTTAAACAACGGCTTCTGAATTTTGTAAAATCATTG
TCTACTGTGCTCGCCTCTGCATATTGTTTGTCCAGTGTTATTCAACAAGCACAGAAGTTT
TTCATGGAGACAAGTGATGCAAATGATACTAGAAATATGGGCTTCCAGTTTGCTGGTAGA
GCTATTTATACTGCAGTGTGGGTCGCAGCTGCGTCATTATTCATGGAGTTGCTAGGTTTC
TCTACACAGAAATGGCTAACTGCGGGAGGACTTGGGACAGTATTGCTGACACTTGCTGGT
CGCGAGATATTCACAAATTTTCTTTCAAGTATCATGATCCATGCCACCCGTCCGTTTGTC
CTTAATGAATGGATTCAAACCAAGATTGAAGGCTATGAAGTTTCTGGCACAGTTGAGCAT
GTGGGTTGGTGGTCCCCTACAATCATAAGAGGCGAGGATCGAGAGGCTATTCACATTCCA
AACCACAAGTTTACAGTTAATGTTGTCCGGAATCTGACTCAGAAAACTCATTGGCGTATT
AAAACTCACTTAGCCATCAGTCATTTGGATGTCAGTAAGATAAATAATATTGTAGCTGAC
ATGCGCAAAGTTTTGGCAAAGAATCCCCAAGTTGAGCAACAGAGGTTACATAGAAGAGTA
TTCCTGGAGAATGTCAACCCTGAAAATCAAGCCCTGTTGATCTTAATATCCTGCTTTGTC
AAGACATCACACTTTGAAGAATACTTGTGTGTCAAGGAAGCTATTTTGTTAGATCTTCTC
AGAGTCATTCGACATCACCGAGCTCGGCTTGCCACTCCCATCCGTACTGTTCAGAAAATA
TATAGTGATGCTGACTTGGACAACATGCCATATGACTCTGCCTTCAGTCGTGGAGCAGCA
TCAACTCGTCCGTTGCTACTGATTGAGCCATCTTATAAAGTCAATGGGGAAGATCGCACA
AAAGGTCGACCAATTCGTGTGAATGGTGAAGAAGACACCAAGGAAAAGTCTACCATGAAA
CCGGCACCTGACAGCAAGGTTGAAACCAAGAGCGGACCTGCATCTGATCCTAAAATCAAA
GAAACACTTCCAGCTAACTCTAATGGTAAGGATGTGCCAATTTCTGACCTGAAACTTGAT
CCCAAAGTTGACAAAATGGCAAATGCTGAATCCAAAGATGACATCAAAGCATCGGATCCA
AAACCGAGTAAAGCAACAGTGAAAAACACTTCAAAACCGGTCCCAAAAGCTGAGCTAAAG
TCTGCAGAAGTTGGTACTTCTGATTCCAAAGATCCTCCAGAGAACATCTCTAGCAACAAG
CAAGTTAAGAAGGTAAGCCAGGGAAGTGGTCGCACGACCAATGTAGTTGATAATTCCGCA
ACTTCTCCATCAGATGTTAGAGAGAAAACAGGAAATGTCCCATCCACTTCACAATCTAAA
AGAGAGGATGAAAAACCGCAAGTCACACAACCATCTGTGCCATTGAAACCTGCATTGGAA
GAGAACATTGTTCTTGGTGTTGCTCTCGAGGGTTCAAAAAGAACCCTTCCAATTGAAGAA
GAGCTGTCGCCACCACCAAATCCAGCAGAATCCAAGGAAATGGCTACTAGCCGTAGTAGT
AGTAATGCTTCTACCATTGCAGAGAAAGATAAACAAGACGGACAGCGTTCAAACAGACCT
AATTCTACAGCTCTAGATCAGTCGGGTAAAAGGCCCTCAACCGACAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028180
PEP Infomation

pacid=37465121 transcript=PGSC0003DMT400041619 locus=PGSC0003DMG400016133 ID=PGSC0003DMT400041619.v4.03 annot-version=v4.03
Sequence

MAAVGSLQLSHYLGTCKNHERLKKYSPIQNTLGRSRWHSCCTNLSSFSSRQDSWSIHHLR
GLQVKKHVLPCRSNLFKCNSFLKPDQAFDISVKNAAIILKRSYNSLQGSPHLLKLLPAIG
ILTFAVWGLAPFLRQSRNVLLHNDNSWGKSGTYHVMTFYLQPLLLWTGAMLVCRALDPMV
LPTEASQIVKQRLLNFVKSLSTVLASAYCLSSVIQQAQKFFMETSDANDTRNMGFQFAGR
AIYTAVWVAAASLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFV
LNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAIHIPNHKFTVNVVRNLTQKTHWRI
KTHLAISHLDVSKINNIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQALLILISCFV
KTSHFEEYLCVKEAILLDLLRVIRHHRARLATPIRTVQKIYSDADLDNMPYDSAFSRGAA
STRPLLLIEPSYKVNGEDRTKGRPIRVNGEEDTKEKSTMKPAPDSKVETKSGPASDPKIK
ETLPANSNGKDVPISDLKLDPKVDKMANAESKDDIKASDPKPSKATVKNTSKPVPKAELK
SAEVGTSDSKDPPENISSNKQVKKVSQGSGRTTNVVDNSATSPSDVREKTGNVPSTSQSK
REDEKPQVTQPSVPLKPALEENIVLGVALEGSKRTLPIEEELSPPPNPAESKEMATSRSS
SNASTIAEKDKQDGQRSNRPNSTALDQSGKRPSTDN*

Transcript Sequence

Transcript ID

PGSC0003DMT400041619
Transcript Infomation

pacid=37465121 locus=PGSC0003DMG400016133 ID=PGSC0003DMT400041619.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTGTGGGTTCTTTGCAGTTGTCCCATTATTTGGGGACTTGCAAGAACCATGAG
CGCCTTAAGAAATATTCACCTATACAGAACACACTTGGAAGGAGCAGGTGGCATTCTTGT
TGCACGAATCTGTCATCTTTTTCATCGCGGCAGGACTCTTGGAGTATCCATCACTTAAGA
GGATTGCAAGTGAAGAAACATGTGCTCCCATGTAGAAGCAATTTGTTCAAGTGTAATTCT
TTCCTAAAACCTGACCAAGCTTTTGACATTTCTGTAAAGAATGCTGCTATTATACTGAAA
AGATCATACAATAGCTTACAAGGAAGCCCACATCTGCTTAAGTTGCTTCCGGCAATTGGA
ATCCTTACTTTTGCAGTTTGGGGTCTTGCACCATTTCTGCGTCAAAGTAGAAATGTACTC
CTTCATAATGATAACAGCTGGGGAAAGAGTGGTACATATCATGTTATGACCTTTTATCTT
CAACCTTTGCTGTTGTGGACTGGGGCAATGCTTGTCTGCAGAGCATTAGACCCCATGGTG
CTACCAACAGAAGCTAGTCAAATTGTTAAACAACGGCTTCTGAATTTTGTAAAATCATTG
TCTACTGTGCTCGCCTCTGCATATTGTTTGTCCAGTGTTATTCAACAAGCACAGAAGTTT
TTCATGGAGACAAGTGATGCAAATGATACTAGAAATATGGGCTTCCAGTTTGCTGGTAGA
GCTATTTATACTGCAGTGTGGGTCGCAGCTGCGTCATTATTCATGGAGTTGCTAGGTTTC
TCTACACAGAAATGGCTAACTGCGGGAGGACTTGGGACAGTATTGCTGACACTTGCTGGT
CGCGAGATATTCACAAATTTTCTTTCAAGTATCATGATCCATGCCACCCGTCCGTTTGTC
CTTAATGAATGGATTCAAACCAAGATTGAAGGCTATGAAGTTTCTGGCACAGTTGAGCAT
GTGGGTTGGTGGTCCCCTACAATCATAAGAGGCGAGGATCGAGAGGCTATTCACATTCCA
AACCACAAGTTTACAGTTAATGTTGTCCGGAATCTGACTCAGAAAACTCATTGGCGTATT
AAAACTCACTTAGCCATCAGTCATTTGGATGTCAGTAAGATAAATAATATTGTAGCTGAC
ATGCGCAAAGTTTTGGCAAAGAATCCCCAAGTTGAGCAACAGAGGTTACATAGAAGAGTA
TTCCTGGAGAATGTCAACCCTGAAAATCAAGCCCTGTTGATCTTAATATCCTGCTTTGTC
AAGACATCACACTTTGAAGAATACTTGTGTGTCAAGGAAGCTATTTTGTTAGATCTTCTC
AGAGTCATTCGACATCACCGAGCTCGGCTTGCCACTCCCATCCGTACTGTTCAGAAAATA
TATAGTGATGCTGACTTGGACAACATGCCATATGACTCTGCCTTCAGTCGTGGAGCAGCA
TCAACTCGTCCGTTGCTACTGATTGAGCCATCTTATAAAGTCAATGGGGAAGATCGCACA
AAAGGTCGACCAATTCGTGTGAATGGTGAAGAAGACACCAAGGAAAAGTCTACCATGAAA
CCGGCACCTGACAGCAAGGTTGAAACCAAGAGCGGACCTGCATCTGATCCTAAAATCAAA
GAAACACTTCCAGCTAACTCTAATGGTAAGGATGTGCCAATTTCTGACCTGAAACTTGAT
CCCAAAGTTGACAAAATGGCAAATGCTGAATCCAAAGATGACATCAAAGCATCGGATCCA
AAACCGAGTAAAGCAACAGTGAAAAACACTTCAAAACCGGTCCCAAAAGCTGAGCTAAAG
TCTGCAGAAGTTGGTACTTCTGATTCCAAAGATCCTCCAGAGAACATCTCTAGCAACAAG
CAAGTTAAGAAGGTAAGCCAGGGAAGTGGTCGCACGACCAATGTAGTTGATAATTCCGCA
ACTTCTCCATCAGATGTTAGAGAGAAAACAGGAAATGTCCCATCCACTTCACAATCTAAA
AGAGAGGATGAAAAACCGCAAGTCACACAACCATCTGTGCCATTGAAACCTGCATTGGAA
GAGAACATTGTTCTTGGTGTTGCTCTCGAGGGTTCAAAAAGAACCCTTCCAATTGAAGAA
GAGCTGTCGCCACCACCAAATCCAGCAGAATCCAAGGAAATGGCTACTAGCCGTAGTAGT
AGTAATGCTTCTACCATTGCAGAGAAAGATAAACAAGACGGACAGCGTTCAAACAGACCT
AATTCTACAGCTCTAGATCAGTCGGGTAAAAGGCCCTCAACCGACAATTGA