Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041612
CDS Infomation

pacid=37464766 polypeptide=PGSC0003DMP400028173 locus=PGSC0003DMG400016130 ID=PGSC0003DMT400041612.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGCAAGACCCTTACGCCGCCTCTTCCGCCAACATCTTCTCCCAGAAAAACTCC
CGTCCAGCTGACGACACTGTATTCTTCTCCATATACCCAGACATTACCTTAAACCCCACT
TCCCCTCCAACCACCATAACTTCTCAACTCCAATCTCTTCACCTCCAAATCCTCCAAACT
CTCTCCCCTTTCACTTCCAATTACATATGGCAACACGAACCCTTCACCCTCACCCTTTCC
CCCACCCCCACTCCTCCCCATCTCTCGGGCAAACTCCGGTACGGCGACAACCTCGAAGAC
GAATGGTTCGTCGTATTCCTCCTTTTCGAAACCTCAAAACGCTTCCCTAATGTGTCAATT
CGTGTTTGGGATAGTGACGGCGAGTTCTTGTTGATTGAAACCGCATTTCATCTCCCCCGT
TGGGTTAACCCGGATACAGCGACGAACCGGGTTTTTATCCGAGGTGGGTTTCTTCATATT
ATCCCTAATTCGGTAATACCCACAACCCCATCAATCCATGAGGCGTTAAATTTGTTAAGG
AATGAGATTAGTACTAGAGCACCTGAGGGAGTGCAGCGTCAGTTAGAGAATAGGTTGAAG
GAGTATCCGAATAGAGCGGAGAAGAATGTGCATAAGGTTAGGGTTAGGGTTCCGGTGTCA
GTTGCAAAAGTGTTAAAGCATGAGACTTGTTTGATTTCTCTTGCGGTTGAAGGATTTTAC
GATAGGGATATCGATACAATGAAGTTCGCGGCGAAGATGGAGAGGTTTTTGGGGAATGGG
GGTAGTGGGGAGGAGCTGGTTCGAGTTTTGGTTAGGATGTCTAGGGCAATGTATGCACAG
TTGGTGCAGCAGACATTTCAGGCGCCGAAATGTTATCCGGCTTTGCCACCTAGGAGTGAT
GTGGGTGCTTATATGGAAGCTGAGCTGGGAATGAAGATTGCTTGTGGATTTGAGATGATT
TATCAGTTGAAAAAGAGGCAGGGTATGGAGGGAAAAGGGAGTACTTGGGACGCGTTTAGG
CAGAGTCTAGAACGGAGTGGGTACTTTGAAGGGCTGTTGCCAGGATCGAACGAGTATAAA
AGATTGATGCAGAATGCTGAGGAGTATTACAAGAATAGTTCACTGCATGCGAGAGAAAGT
GCTACACTAAGTGCTCCAGTGCGAAGAATAGATGAGATCCTTGCCCTTCCTGAGTCTGCT
GATGACTTTAAGGATCAGGAGCTACCACCATCTGATGATGATGCATGGCTTTATGGTGGG
GAGGATGAGCTAAATACTGCCCTTCAAGAGAGGCAAAAGGAGATGGAACTTTACAATTCA
AAAAGGAAACAGAAATCAAAAGAGCAGGATGGGCCCAGCAATAGTTCTGATAATTTTGAT
CTAAAAGATATATCGAAGTCTATGCAAGCATTTGTCACAAAAGTGGCCAGTTATGAAGGT
GCAGAGGTTCCAGAAGACAGGAATGAAAAGGATGTGGACTTTGATGTGGATCGCTTTATG
AAAGACATGGAATCGTTTGTGAGGCGTCAGGGCAATGAAGACACTGGCAGTGATGTTGAT
ATAGAAGAAGGATCATCATCGGATATGGAGTTCGATGAATCTGAAGATGAGAGTGATATT
GCCAAGCCATATGATGATACTGATGAGAGAGGTGCCGCTTTCATGCATTCGTATTCGGAC
ACTCTGAATGAAGAACTGAAAGGCACCACTCTAAGTAATACCTTTGTCCGTGCAAATGGA
GAGTCCATAAAGAAAGATAAGGGAACATCTACTGCTGCAGAAAGCATGGAAGAGGATTTC
ACTCCGGTAGATGTGGATTTCAATCTCGTAAAGAATTTCCTCGATTCGTTTTCTTCTCAA
GATGGACTTCCAGGACCTGCTTCTAACTTGCTTGGACTTATGGGTCTACAGCTACCACCA
GATGCTAGCAAAGGGAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400028173
PEP Infomation

pacid=37464766 transcript=PGSC0003DMT400041612 locus=PGSC0003DMG400016130 ID=PGSC0003DMT400041612.v4.03 annot-version=v4.03
Sequence

MAEQDPYAASSANIFSQKNSRPADDTVFFSIYPDITLNPTSPPTTITSQLQSLHLQILQT
LSPFTSNYIWQHEPFTLTLSPTPTPPHLSGKLRYGDNLEDEWFVVFLLFETSKRFPNVSI
RVWDSDGEFLLIETAFHLPRWVNPDTATNRVFIRGGFLHIIPNSVIPTTPSIHEALNLLR
NEISTRAPEGVQRQLENRLKEYPNRAEKNVHKVRVRVPVSVAKVLKHETCLISLAVEGFY
DRDIDTMKFAAKMERFLGNGGSGEELVRVLVRMSRAMYAQLVQQTFQAPKCYPALPPRSD
VGAYMEAELGMKIACGFEMIYQLKKRQGMEGKGSTWDAFRQSLERSGYFEGLLPGSNEYK
RLMQNAEEYYKNSSLHARESATLSAPVRRIDEILALPESADDFKDQELPPSDDDAWLYGG
EDELNTALQERQKEMELYNSKRKQKSKEQDGPSNSSDNFDLKDISKSMQAFVTKVASYEG
AEVPEDRNEKDVDFDVDRFMKDMESFVRRQGNEDTGSDVDIEEGSSSDMEFDESEDESDI
AKPYDDTDERGAAFMHSYSDTLNEELKGTTLSNTFVRANGESIKKDKGTSTAAESMEEDF
TPVDVDFNLVKNFLDSFSSQDGLPGPASNLLGLMGLQLPPDASKGK*

Transcript Sequence

Transcript ID

PGSC0003DMT400041612
Transcript Infomation

pacid=37464766 locus=PGSC0003DMG400016130 ID=PGSC0003DMT400041612.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGCAAGACCCTTACGCCGCCTCTTCCGCCAACATCTTCTCCCAGAAAAACTCC
CGTCCAGCTGACGACACTGTATTCTTCTCCATATACCCAGACATTACCTTAAACCCCACT
TCCCCTCCAACCACCATAACTTCTCAACTCCAATCTCTTCACCTCCAAATCCTCCAAACT
CTCTCCCCTTTCACTTCCAATTACATATGGCAACACGAACCCTTCACCCTCACCCTTTCC
CCCACCCCCACTCCTCCCCATCTCTCGGGCAAACTCCGGTACGGCGACAACCTCGAAGAC
GAATGGTTCGTCGTATTCCTCCTTTTCGAAACCTCAAAACGCTTCCCTAATGTGTCAATT
CGTGTTTGGGATAGTGACGGCGAGTTCTTGTTGATTGAAACCGCATTTCATCTCCCCCGT
TGGGTTAACCCGGATACAGCGACGAACCGGGTTTTTATCCGAGGTGGGTTTCTTCATATT
ATCCCTAATTCGGTAATACCCACAACCCCATCAATCCATGAGGCGTTAAATTTGTTAAGG
AATGAGATTAGTACTAGAGCACCTGAGGGAGTGCAGCGTCAGTTAGAGAATAGGTTGAAG
GAGTATCCGAATAGAGCGGAGAAGAATGTGCATAAGGTTAGGGTTAGGGTTCCGGTGTCA
GTTGCAAAAGTGTTAAAGCATGAGACTTGTTTGATTTCTCTTGCGGTTGAAGGATTTTAC
GATAGGGATATCGATACAATGAAGTTCGCGGCGAAGATGGAGAGGTTTTTGGGGAATGGG
GGTAGTGGGGAGGAGCTGGTTCGAGTTTTGGTTAGGATGTCTAGGGCAATGTATGCACAG
TTGGTGCAGCAGACATTTCAGGCGCCGAAATGTTATCCGGCTTTGCCACCTAGGAGTGAT
GTGGGTGCTTATATGGAAGCTGAGCTGGGAATGAAGATTGCTTGTGGATTTGAGATGATT
TATCAGTTGAAAAAGAGGCAGGGTATGGAGGGAAAAGGGAGTACTTGGGACGCGTTTAGG
CAGAGTCTAGAACGGAGTGGGTACTTTGAAGGGCTGTTGCCAGGATCGAACGAGTATAAA
AGATTGATGCAGAATGCTGAGGAGTATTACAAGAATAGTTCACTGCATGCGAGAGAAAGT
GCTACACTAAGTGCTCCAGTGCGAAGAATAGATGAGATCCTTGCCCTTCCTGAGTCTGCT
GATGACTTTAAGGATCAGGAGCTACCACCATCTGATGATGATGCATGGCTTTATGGTGGG
GAGGATGAGCTAAATACTGCCCTTCAAGAGAGGCAAAAGGAGATGGAACTTTACAATTCA
AAAAGGAAACAGAAATCAAAAGAGCAGGATGGGCCCAGCAATAGTTCTGATAATTTTGAT
CTAAAAGATATATCGAAGTCTATGCAAGCATTTGTCACAAAAGTGGCCAGTTATGAAGGT
GCAGAGGTTCCAGAAGACAGGAATGAAAAGGATGTGGACTTTGATGTGGATCGCTTTATG
AAAGACATGGAATCGTTTGTGAGGCGTCAGGGCAATGAAGACACTGGCAGTGATGTTGAT
ATAGAAGAAGGATCATCATCGGATATGGAGTTCGATGAATCTGAAGATGAGAGTGATATT
GCCAAGCCATATGATGATACTGATGAGAGAGGTGCCGCTTTCATGCATTCGTATTCGGAC
ACTCTGAATGAAGAACTGAAAGGCACCACTCTAAGTAATACCTTTGTCCGTGCAAATGGA
GAGTCCATAAAGAAAGATAAGGGAACATCTACTGCTGCAGAAAGCATGGAAGAGGATTTC
ACTCCGGTAGATGTGGATTTCAATCTCGTAAAGAATTTCCTCGATTCGTTTTCTTCTCAA
GATGGACTTCCAGGACCTGCTTCTAACTTGCTTGGACTTATGGGTCTACAGCTACCACCA
GATGCTAGCAAAGGGAAATAA