Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041603
CDS Infomation

pacid=37467132 polypeptide=PGSC0003DMP400028169 locus=PGSC0003DMG400016126 ID=PGSC0003DMT400041603.v4.03 annot-version=v4.03
Sequence

ATGGAAGGTGAAAGTGTTGTACAAATTCCAAAAAATGGAGGGAAAGAAGAAATAAAAACC
CAAGAAGTAGAAAAGGAACAAGAAGAAGTGGAAATTACAATTTCATCAGGTGAGAAAAAT
GAGAAAAAAGATAACGACCAGTTATCGCCAAGGGCAGTTTTGGAAATTCACATATCAGGT
ACATCGGATTCCGATAACAGCAGTATAAGCAGCGGCGAAAGAAGCCGGAGCTTCGGTTCA
TCTCCGTCTCCCGTCGGCGAAAAACCGGCCGTTTCCGACGGAACCGACGCCGCCGCCGCC
GGCGGTGGAGAAGAAACAGGACAAGGGTTGAGATTTAAGAATTTGTTCGATCAGATGAAG
AGAAAATCGATTCGGAGATTATCAGCGATTCCATTATTAATTGGATATGAAAATTTACTA
GCGAAGAAGAATATAAAGAGGAAATTACTGTCGAGAATTCGAAGTGCTGAAGAAGAAACA
ATTGATTGCCATGATTTTGTTGTTCCGAAGCCATCATGGAGGAATTTTAGCCTTGATGAA
CTTGCTCAAGCTACTAATAATTTCTCGCCAGATAACTTAATTGGCAAAGGAGGACATGCA
GAAGTGTACAAAGGACATTTACAAGATGGTCAAGTTGTTGCAGTCAAGAAAATAACAAAG
AAAGAAAAGAATGATGAGGACAGAGTTGGAGACTTCTTGTCTGAGTTAGGAATCATTGCT
CATATCAACAACACTAATGCTGCTAAGTTAATTGGTTTCAGCGTTGATGGTGGTTTGCAC
CTTGTTCTTCAGTACTTGCACCATGGCAGCCTCTCTTCCGTACTACACGGTAGAGAAGAG
TGCCTTGAATGGAAAATAAGATATAAAGTGGCGGTTGGCGTAGCTGAAGGATTATGTTAT
CTTCATTGTGATTGCCAAAGGCGAATAATCCATAGAGATATTACAGCCTCAAACATTCTT
CTAACGGAAGATTATGAACCTCAGATATCTGATTTTGGACTAGCAAAGTGGCTGCCAGAA
AAATGGGTTCATCATATTGTTTCTCCTATTGAAGGCACTTTCGGATATATGGCACCAGAG
TACTTTATGCACGGGATTGTTCATGAGAAGACCGATGTTTTTGCCTTTGGTGTTCTGCTA
TTGGAGCTTATAACTGGTCGTCGTGCTGTTGATTCATCCAGACAGAGTCTTGTAATGTCG
GCAAAACCAATGCTGGAACAGAACAATGTTAAGGAATTAGCGGACCCTCGTCTAGGAGAT
GCCTATGATGTTGTTGAGATGAAACGAGCTATGTTTACAGCTTCTACATGCATTCACCAC
TTGCCAAACATGCGTCCTAACATGATACGGGCTGTTCAGCTATTGAAAGGCGAGAACTTA
CCAATAGACATGAAGCAGAAATCGACAGGAGGAAGAGCATTGATGCTGGATGCTTGTGAT
TTAGAAGATTACAGTAGCACAACTTATCTGAAGGATCTCAATCGTCATATGCAGCTCGTT
ATGGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028169
PEP Infomation

pacid=37467132 transcript=PGSC0003DMT400041603 locus=PGSC0003DMG400016126 ID=PGSC0003DMT400041603.v4.03 annot-version=v4.03
Sequence

MEGESVVQIPKNGGKEEIKTQEVEKEQEEVEITISSGEKNEKKDNDQLSPRAVLEIHISG
TSDSDNSSISSGERSRSFGSSPSPVGEKPAVSDGTDAAAAGGGEETGQGLRFKNLFDQMK
RKSIRRLSAIPLLIGYENLLAKKNIKRKLLSRIRSAEEETIDCHDFVVPKPSWRNFSLDE
LAQATNNFSPDNLIGKGGHAEVYKGHLQDGQVVAVKKITKKEKNDEDRVGDFLSELGIIA
HINNTNAAKLIGFSVDGGLHLVLQYLHHGSLSSVLHGREECLEWKIRYKVAVGVAEGLCY
LHCDCQRRIIHRDITASNILLTEDYEPQISDFGLAKWLPEKWVHHIVSPIEGTFGYMAPE
YFMHGIVHEKTDVFAFGVLLLELITGRRAVDSSRQSLVMSAKPMLEQNNVKELADPRLGD
AYDVVEMKRAMFTASTCIHHLPNMRPNMIRAVQLLKGENLPIDMKQKSTGGRALMLDACD
LEDYSSTTYLKDLNRHMQLVME*

Transcript Sequence

Transcript ID

PGSC0003DMT400041603
Transcript Infomation

pacid=37467132 locus=PGSC0003DMG400016126 ID=PGSC0003DMT400041603.v4.03 annot-version=v4.03
Sequence

ATGGAAGGTGAAAGTGTTGTACAAATTCCAAAAAATGGAGGGAAAGAAGAAATAAAAACC
CAAGAAGTAGAAAAGGAACAAGAAGAAGTGGAAATTACAATTTCATCAGGTGAGAAAAAT
GAGAAAAAAGATAACGACCAGTTATCGCCAAGGGCAGTTTTGGAAATTCACATATCAGGT
ACATCGGATTCCGATAACAGCAGTATAAGCAGCGGCGAAAGAAGCCGGAGCTTCGGTTCA
TCTCCGTCTCCCGTCGGCGAAAAACCGGCCGTTTCCGACGGAACCGACGCCGCCGCCGCC
GGCGGTGGAGAAGAAACAGGACAAGGGTTGAGATTTAAGAATTTGTTCGATCAGATGAAG
AGAAAATCGATTCGGAGATTATCAGCGATTCCATTATTAATTGGATATGAAAATTTACTA
GCGAAGAAGAATATAAAGAGGAAATTACTGTCGAGAATTCGAAGTGCTGAAGAAGAAACA
ATTGATTGCCATGATTTTGTTGTTCCGAAGCCATCATGGAGGAATTTTAGCCTTGATGAA
CTTGCTCAAGCTACTAATAATTTCTCGCCAGATAACTTAATTGGCAAAGGAGGACATGCA
GAAGTGTACAAAGGACATTTACAAGATGGTCAAGTTGTTGCAGTCAAGAAAATAACAAAG
AAAGAAAAGAATGATGAGGACAGAGTTGGAGACTTCTTGTCTGAGTTAGGAATCATTGCT
CATATCAACAACACTAATGCTGCTAAGTTAATTGGTTTCAGCGTTGATGGTGGTTTGCAC
CTTGTTCTTCAGTACTTGCACCATGGCAGCCTCTCTTCCGTACTACACGGTAGAGAAGAG
TGCCTTGAATGGAAAATAAGATATAAAGTGGCGGTTGGCGTAGCTGAAGGATTATGTTAT
CTTCATTGTGATTGCCAAAGGCGAATAATCCATAGAGATATTACAGCCTCAAACATTCTT
CTAACGGAAGATTATGAACCTCAGATATCTGATTTTGGACTAGCAAAGTGGCTGCCAGAA
AAATGGGTTCATCATATTGTTTCTCCTATTGAAGGCACTTTCGGATATATGGCACCAGAG
TACTTTATGCACGGGATTGTTCATGAGAAGACCGATGTTTTTGCCTTTGGTGTTCTGCTA
TTGGAGCTTATAACTGGTCGTCGTGCTGTTGATTCATCCAGACAGAGTCTTGTAATGTCG
GCAAAACCAATGCTGGAACAGAACAATGTTAAGGAATTAGCGGACCCTCGTCTAGGAGAT
GCCTATGATGTTGTTGAGATGAAACGAGCTATGTTTACAGCTTCTACATGCATTCACCAC
TTGCCAAACATGCGTCCTAACATGATACGGGCTGTTCAGCTATTGAAAGGCGAGAACTTA
CCAATAGACATGAAGCAGAAATCGACAGGAGGAAGAGCATTGATGCTGGATGCTTGTGAT
TTAGAAGATTACAGTAGCACAACTTATCTGAAGGATCTCAATCGTCATATGCAGCTCGTT
ATGGAGTAA