Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041594
CDS Infomation

pacid=37466584 polypeptide=PGSC0003DMP400028163 locus=PGSC0003DMG400016122 ID=PGSC0003DMT400041594.v4.03 annot-version=v4.03
Sequence

ATGGGGGAACAAAGCAAAAAATTGCATATTGCAGTATTTCCATGGCTAGCTTTTGGTCAT
ATGATTCCGTATTTTGAGCTTTCAAAGCTCATAGCTCAGAAGGGTCACAAAATTTCTTTC
ATTTCTACTCCTAGAAATATCGATCGTCTTCCAAAACTTCCACCAAATCTCGCCCCCTTC
TTGAATTTCGTCAAAATTCCTCTGCCCCACATTGAAAATTTACCGAAAAATGCAGAAGCC
ACTATTGATTTACCTTATGAGCAAGTAGCGTACCTCAAAATTGCTCAAGATGGACACAAA
GAACCCATAGCTAAGTTCCTCGAAGATTCAGCTCCTGATTGTATATTCTTCGATTTTGCT
TCTTACTGGATTCCTTCAATTGCTTCAAAATTCAACATTCCAACGGCCTATTTCACCATT
TCCATCGCTGCGTCTATGGGTTTCATGGGACCCGTGCCGGGATTGAACAATGATTATGAA
ATTCGAATGAAGCCTGAGGAATACACAGTTACCCCAAAATGGGTTCCATTTGAAACCACC
GTTGCTTTCAAGTTTTTCGAAATTTCGAGAATCTTTGAAGCTTCCGTGAAGGGTGATGAA
GAGAATGTTTCTGATATTTTTCGTATTTATAAAGCTATCGAACACTCTGATTTTTTGCTT
GTGAGGAGTTGTTCGGAATTTGAACCAGAATGGTTGAAAGTTGTCGGAGATATTCACCGG
AAACCGGTTTTCCCGGTGGGCCAACTTCCGAAAACGACTTATGAAGATGACAACACGAAG
ATCGATGCATGGACAGAGATAAAACTATGGCTTGATGAGCAAGAAAAGGGGAAAGTGATT
TACGTGGCATTTGGTAGCGAGGCAAAACCAAGTCAAAACGAACTCATTGAGTTATCACTC
GGGTTAGAGCTTTCCGGGTTGCCATTTTTTTGGGTTTTGATAAATAAAAGAGGAGAATCC
GATGATGAATTAATTCAATTACCAGAAGGTTTTGAAGAACGAACAAAGGGAAGGGGTATT
GTGTGCACGAGTTGGGCCCCACAACTTAAGATACTAAGTCATGACTCAGTGGGTGGATTT
TTTACTCATTCGGGATGGAGTTCGGTAGTTGAAGCAATACAATTCGAGAAGCCATTGGTT
CTTTTAACATTTTCGTCTGATCAAGGGATAAATGCTACACTACTGGAGGAGAAGAAGATG
GCGTATTTGATTCCAAGAGATGATCGTGATGGGTCGTTCACTCGTGACTCGGTGGCTGAG
TCAGTGAGTCTAGTACTTGTTGAAAAACAGGGTGAAATTTATCGGGAAAAGATTAAAGAG
GCGAAAAATATCTTTTGTGACGAAAGAAGGCAAGATAATTATGTGGAAAATATATTAAGT
TATGTTCAAAATTATAAAAAGACTAAAATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400028163
PEP Infomation

pacid=37466584 transcript=PGSC0003DMT400041594 locus=PGSC0003DMG400016122 ID=PGSC0003DMT400041594.v4.03 annot-version=v4.03
Sequence

MGEQSKKLHIAVFPWLAFGHMIPYFELSKLIAQKGHKISFISTPRNIDRLPKLPPNLAPF
LNFVKIPLPHIENLPKNAEATIDLPYEQVAYLKIAQDGHKEPIAKFLEDSAPDCIFFDFA
SYWIPSIASKFNIPTAYFTISIAASMGFMGPVPGLNNDYEIRMKPEEYTVTPKWVPFETT
VAFKFFEISRIFEASVKGDEENVSDIFRIYKAIEHSDFLLVRSCSEFEPEWLKVVGDIHR
KPVFPVGQLPKTTYEDDNTKIDAWTEIKLWLDEQEKGKVIYVAFGSEAKPSQNELIELSL
GLELSGLPFFWVLINKRGESDDELIQLPEGFEERTKGRGIVCTSWAPQLKILSHDSVGGF
FTHSGWSSVVEAIQFEKPLVLLTFSSDQGINATLLEEKKMAYLIPRDDRDGSFTRDSVAE
SVSLVLVEKQGEIYREKIKEAKNIFCDERRQDNYVENILSYVQNYKKTKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400041594
Transcript Infomation

pacid=37466584 locus=PGSC0003DMG400016122 ID=PGSC0003DMT400041594.v4.03 annot-version=v4.03
Sequence

ATGGGGGAACAAAGCAAAAAATTGCATATTGCAGTATTTCCATGGCTAGCTTTTGGTCAT
ATGATTCCGTATTTTGAGCTTTCAAAGCTCATAGCTCAGAAGGGTCACAAAATTTCTTTC
ATTTCTACTCCTAGAAATATCGATCGTCTTCCAAAACTTCCACCAAATCTCGCCCCCTTC
TTGAATTTCGTCAAAATTCCTCTGCCCCACATTGAAAATTTACCGAAAAATGCAGAAGCC
ACTATTGATTTACCTTATGAGCAAGTAGCGTACCTCAAAATTGCTCAAGATGGACACAAA
GAACCCATAGCTAAGTTCCTCGAAGATTCAGCTCCTGATTGTATATTCTTCGATTTTGCT
TCTTACTGGATTCCTTCAATTGCTTCAAAATTCAACATTCCAACGGCCTATTTCACCATT
TCCATCGCTGCGTCTATGGGTTTCATGGGACCCGTGCCGGGATTGAACAATGATTATGAA
ATTCGAATGAAGCCTGAGGAATACACAGTTACCCCAAAATGGGTTCCATTTGAAACCACC
GTTGCTTTCAAGTTTTTCGAAATTTCGAGAATCTTTGAAGCTTCCGTGAAGGGTGATGAA
GAGAATGTTTCTGATATTTTTCGTATTTATAAAGCTATCGAACACTCTGATTTTTTGCTT
GTGAGGAGTTGTTCGGAATTTGAACCAGAATGGTTGAAAGTTGTCGGAGATATTCACCGG
AAACCGGTTTTCCCGGTGGGCCAACTTCCGAAAACGACTTATGAAGATGACAACACGAAG
ATCGATGCATGGACAGAGATAAAACTATGGCTTGATGAGCAAGAAAAGGGGAAAGTGATT
TACGTGGCATTTGGTAGCGAGGCAAAACCAAGTCAAAACGAACTCATTGAGTTATCACTC
GGGTTAGAGCTTTCCGGGTTGCCATTTTTTTGGGTTTTGATAAATAAAAGAGGAGAATCC
GATGATGAATTAATTCAATTACCAGAAGGTTTTGAAGAACGAACAAAGGGAAGGGGTATT
GTGTGCACGAGTTGGGCCCCACAACTTAAGATACTAAGTCATGACTCAGTGGGTGGATTT
TTTACTCATTCGGGATGGAGTTCGGTAGTTGAAGCAATACAATTCGAGAAGCCATTGGTT
CTTTTAACATTTTCGTCTGATCAAGGGATAAATGCTACACTACTGGAGGAGAAGAAGATG
GCGTATTTGATTCCAAGAGATGATCGTGATGGGTCGTTCACTCGTGACTCGGTGGCTGAG
TCAGTGAGTCTAGTACTTGTTGAAAAACAGGGTGAAATTTATCGGGAAAAGATTAAAGAG
GCGAAAAATATCTTTTGTGACGAAAGAAGGCAAGATAATTATGTGGAAAATATATTAAGT
TATGTTCAAAATTATAAAAAGACTAAAATATGA