Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041591
CDS Infomation

pacid=37464145 polypeptide=PGSC0003DMP400028160 locus=PGSC0003DMG400016120 ID=PGSC0003DMT400041591.v4.03 annot-version=v4.03
Sequence

ATGGCAGTTTCTTCAGGTCCTGTATTTAGAATTAACCAGCAGCCAAGTTCTCCATACTTG
ACAACTCCAAGATTTTACAACTTTACAAGAAAAACATTTCTTGTAAAAGCTTCTGTGAAT
GGCTCAGATGAAATCAATGGGAAGATGGTAAGAAAGGAAGAAAAAGTTGGTTTGCAGATT
GATTTTTCAGGGGAAAAACCACCTACACCATTTTTGGATACAGTCAATTATCCAAAACAT
ATGAAGAATCTATCAAAAATGGATCTTGAACAGTTAGCTGCAGAAGTAAGAGCAGAGATT
GTGTATTCAGTGGCGAAAACTGGAGGTCATTTGAGTTCAAGTTTAGGTGTTGTGGAGTTA
ACTGTTGCTTTGCATCATGTTTTTGATACTCCTGAGGATAAAATTATATGGGATGTTGGT
CATCAGGCATATGCACACAAAATCTTGACAGGAAGGAGGTCTAAAATGCATACAATGAGA
AAGACTTCAGGGCTAGCACCTTTTCCTAAAAGAGATGAAAGTGCTTATGATGCATTTGGT
GCTGGGCATAGTTCAACAAGCATCTCTGCTGGTCTTGGCATGGCGGTTGCTCGAGATCTT
TTAGGAAACAACAACCATGTCATTTCTGTAATCGGAGACGGAGCCATGACTGCAGGACAA
GCATATGAGGCCATGAATAATGCAGGATTCCTCGACTCGAATCTTATAGTCATACTGAAT
GATAATAAACAAGTTTCTTTACCAACCGCAACCTTAGATGGCCCTGCAACTCCAGTAGGA
GCCCTCAGTAGTGCCTTAAGCAAAATCCAAGCTAGTCGTAAGTTTAGACAACTCCGCGAA
GCTGCAAAGAGTATAACAAAGCAAATTGGACCTCAAACACATGAAGTTGCAGCTAAAGTA
GATGAATATGCAAGGGGAATGCTTAGTGCTTCTGGTTCCACACTTTTTGAGGAGCTAGGA
TTATATTACATCGGTCCAGTAGACGGACACAATATCGAAGACTTGATCACTATTCTAAAG
AAGGTAAAAGCTATGCCAGCACCAGGACCAGTTCTAATTCACATTGTAACAGAGAAAGGA
AAAGGCTATCTTCCTGCAGAAGCAGCAGACGATAAAATGCACGGGGTGGCACAGTTTGAT
CCAAAAACAGGAAAGCAATTTAAGGCCAAGTCGCCTACGTTGTCATATACTCAATACTTT
GCTGAATCACTGATCAAAGAAGCCGAAAATGATAAAAAGATTGTAGCTATCCATGCTGCA
ATGGGTGGTGGAACCGGCCTCAATTATTTCCAAAAACAATTTCCAGAACGTTGTTTTGAC
GTTGGCATTGCTGAGCAACATGCAGTTACTTTTGCAGCTGGCTTAGCTACAGAAGGTCTA
AAACCATTTTGTGCTATCTACTCCTCGTTCTTACAACGAGGCTACGATCAGGTGGTGCAC
GACGTGGATCTTCAGAAGTTACCTGTCCGGTTTGCAATGGACCGAGCTGGTTTGGTTGGT
GCAGACGGTCCAACACATTGTGGAGCATTTGATGTGACATACATGGCTTGTTTGCCAAAT
ATGGTAGTCATGGCTCCATCGGACGAAGCAGAGCTAATGCATATGGTTGCAACAGCAGCA
GCTATTGATGATAGGCCTAGTTGTTTCAGATTTCCTAGAGGAAATGGAATTGGTGCAGTT
CTTCCTCTAAACAATAAGGGCATACCAATTGAGGTTGGTAAGGGAAGGATACTGAGAGAA
GGTGAAAGAGTTGCCATTTTGGGATATGGTTCGATAGTACAACAATGTTTGGGAGCTGCA
GACATCCTAAACTCCCATGATGTAAGAGTAACAGTAGCTGATGCTAGGTTCTGCAAACCA
TTGGATGCTGATCTTATTAAGAGATTAGCCAAAGAACATGAAATCTTGATCACTGTTGAA
GAAGGATCAATTGGAGGATTTGGCTCACATGTGTCTCATTTCTTAAGCCTAAACAGCATT
TTGGATGGACCCCTTAAGTTGAGGTCAATGTTACTTCCAGATAGATACATTGATCATGGT
TCACCAGTTGATCAAATTGAAGAAGCTGGTTTATCATCAAGGCATATTTGTGCTACAGTT
CTAACATTATTGGGAAGGCCACAAGAAGCTATGGTAGTAAATCAAATCTCCAAAATGCTA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400028160
PEP Infomation

pacid=37464145 transcript=PGSC0003DMT400041591 locus=PGSC0003DMG400016120 ID=PGSC0003DMT400041591.v4.03 annot-version=v4.03
Sequence

MAVSSGPVFRINQQPSSPYLTTPRFYNFTRKTFLVKASVNGSDEINGKMVRKEEKVGLQI
DFSGEKPPTPFLDTVNYPKHMKNLSKMDLEQLAAEVRAEIVYSVAKTGGHLSSSLGVVEL
TVALHHVFDTPEDKIIWDVGHQAYAHKILTGRRSKMHTMRKTSGLAPFPKRDESAYDAFG
AGHSSTSISAGLGMAVARDLLGNNNHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILN
DNKQVSLPTATLDGPATPVGALSSALSKIQASRKFRQLREAAKSITKQIGPQTHEVAAKV
DEYARGMLSASGSTLFEELGLYYIGPVDGHNIEDLITILKKVKAMPAPGPVLIHIVTEKG
KGYLPAEAADDKMHGVAQFDPKTGKQFKAKSPTLSYTQYFAESLIKEAENDKKIVAIHAA
MGGGTGLNYFQKQFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVH
DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELMHMVATAA
AIDDRPSCFRFPRGNGIGAVLPLNNKGIPIEVGKGRILREGERVAILGYGSIVQQCLGAA
DILNSHDVRVTVADARFCKPLDADLIKRLAKEHEILITVEEGSIGGFGSHVSHFLSLNSI
LDGPLKLRSMLLPDRYIDHGSPVDQIEEAGLSSRHICATVLTLLGRPQEAMVVNQISKML
*

Transcript Sequence

Transcript ID

PGSC0003DMT400041591
Transcript Infomation

pacid=37464145 locus=PGSC0003DMG400016120 ID=PGSC0003DMT400041591.v4.03 annot-version=v4.03
Sequence

ATGGCAGTTTCTTCAGGTCCTGTATTTAGAATTAACCAGCAGCCAAGTTCTCCATACTTG
ACAACTCCAAGATTTTACAACTTTACAAGAAAAACATTTCTTGTAAAAGCTTCTGTGAAT
GGCTCAGATGAAATCAATGGGAAGATGGTAAGAAAGGAAGAAAAAGTTGGTTTGCAGATT
GATTTTTCAGGGGAAAAACCACCTACACCATTTTTGGATACAGTCAATTATCCAAAACAT
ATGAAGAATCTATCAAAAATGGATCTTGAACAGTTAGCTGCAGAAGTAAGAGCAGAGATT
GTGTATTCAGTGGCGAAAACTGGAGGTCATTTGAGTTCAAGTTTAGGTGTTGTGGAGTTA
ACTGTTGCTTTGCATCATGTTTTTGATACTCCTGAGGATAAAATTATATGGGATGTTGGT
CATCAGGCATATGCACACAAAATCTTGACAGGAAGGAGGTCTAAAATGCATACAATGAGA
AAGACTTCAGGGCTAGCACCTTTTCCTAAAAGAGATGAAAGTGCTTATGATGCATTTGGT
GCTGGGCATAGTTCAACAAGCATCTCTGCTGGTCTTGGCATGGCGGTTGCTCGAGATCTT
TTAGGAAACAACAACCATGTCATTTCTGTAATCGGAGACGGAGCCATGACTGCAGGACAA
GCATATGAGGCCATGAATAATGCAGGATTCCTCGACTCGAATCTTATAGTCATACTGAAT
GATAATAAACAAGTTTCTTTACCAACCGCAACCTTAGATGGCCCTGCAACTCCAGTAGGA
GCCCTCAGTAGTGCCTTAAGCAAAATCCAAGCTAGTCGTAAGTTTAGACAACTCCGCGAA
GCTGCAAAGAGTATAACAAAGCAAATTGGACCTCAAACACATGAAGTTGCAGCTAAAGTA
GATGAATATGCAAGGGGAATGCTTAGTGCTTCTGGTTCCACACTTTTTGAGGAGCTAGGA
TTATATTACATCGGTCCAGTAGACGGACACAATATCGAAGACTTGATCACTATTCTAAAG
AAGGTAAAAGCTATGCCAGCACCAGGACCAGTTCTAATTCACATTGTAACAGAGAAAGGA
AAAGGCTATCTTCCTGCAGAAGCAGCAGACGATAAAATGCACGGGGTGGCACAGTTTGAT
CCAAAAACAGGAAAGCAATTTAAGGCCAAGTCGCCTACGTTGTCATATACTCAATACTTT
GCTGAATCACTGATCAAAGAAGCCGAAAATGATAAAAAGATTGTAGCTATCCATGCTGCA
ATGGGTGGTGGAACCGGCCTCAATTATTTCCAAAAACAATTTCCAGAACGTTGTTTTGAC
GTTGGCATTGCTGAGCAACATGCAGTTACTTTTGCAGCTGGCTTAGCTACAGAAGGTCTA
AAACCATTTTGTGCTATCTACTCCTCGTTCTTACAACGAGGCTACGATCAGGTGGTGCAC
GACGTGGATCTTCAGAAGTTACCTGTCCGGTTTGCAATGGACCGAGCTGGTTTGGTTGGT
GCAGACGGTCCAACACATTGTGGAGCATTTGATGTGACATACATGGCTTGTTTGCCAAAT
ATGGTAGTCATGGCTCCATCGGACGAAGCAGAGCTAATGCATATGGTTGCAACAGCAGCA
GCTATTGATGATAGGCCTAGTTGTTTCAGATTTCCTAGAGGAAATGGAATTGGTGCAGTT
CTTCCTCTAAACAATAAGGGCATACCAATTGAGGTTGGTAAGGGAAGGATACTGAGAGAA
GGTGAAAGAGTTGCCATTTTGGGATATGGTTCGATAGTACAACAATGTTTGGGAGCTGCA
GACATCCTAAACTCCCATGATGTAAGAGTAACAGTAGCTGATGCTAGGTTCTGCAAACCA
TTGGATGCTGATCTTATTAAGAGATTAGCCAAAGAACATGAAATCTTGATCACTGTTGAA
GAAGGATCAATTGGAGGATTTGGCTCACATGTGTCTCATTTCTTAAGCCTAAACAGCATT
TTGGATGGACCCCTTAAGTTGAGGTCAATGTTACTTCCAGATAGATACATTGATCATGGT
TCACCAGTTGATCAAATTGAAGAAGCTGGTTTATCATCAAGGCATATTTGTGCTACAGTT
CTAACATTATTGGGAAGGCCACAAGAAGCTATGGTAGTAAATCAAATCTCCAAAATGCTA
TAG