Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041582
CDS Infomation

pacid=37464939 polypeptide=PGSC0003DMP400028152 locus=PGSC0003DMG400016117 ID=PGSC0003DMT400041582.v4.03 annot-version=v4.03
Sequence

ATGGCAGAACAAGGAATGAACAGAAGACCATCGCCAGACCCAGTCTCAGTGCTACGAGGT
CACCGCGCTTCGGTAGCTGACATTTGTTTTCATCCTTCTAAAACCATATTGTTTTCTGGG
TCAACTGATGGAGAATTGCGGATTTGGGACACAGTACAGCACCGTACAGTTTCTTCTTCT
TGGGTGCATAGTGCAGCACATGGGGTAATTTGTGTTGCAGCGAGTCCTGTTCTAGGGGAT
AACAAAGTTATCAGCCAGGGCAGGGATGGTAGCGTCAAATGTTGGGAGTTTGGAGAAGGA
GGTTTGTCCAGGACACCGTTACTTACAATAAAGACAAACGCTTATCATTTCTGCAAACTA
TCAATTGCAAAGTCACCAAGTGAGGCATTGGAGACTGATGATCTGGAGATAAACAAAATT
GTTGATGACATGCAAAGGGGAGAACAAGGAGATCAACCCACTGATTCCACCATATCCAAA
GGTAAGGAGCTTAGTGAAGGACCAAAATATGTTGCTATAGCAGGGGAACAATCTTCTGTG
GTTGAGATTTGGGATGTCAATACTGCAGAAAGAATTGTAGAGCTGCCTCATAGCTCTGGT
AGCCTCTCAAATCAGACTCCGAACCAAAGAGGGATGTGCATGGCAGTTCAAGCGTTCTTA
CCTTCTGAATCTCAGGGGCACCTAAGTGTTATGGCAGGGTATGAGGATGGATCCATTGCT
TGGTGGGACTTGCGTAATCCCGGAGCCCCATTGACTGCAGTCAAGCTTCATTCAGAACCA
GTTTTAAGCTTATGCATAGATGGAGAATGCAAAGGTGGTCTCTCTGGAGCTGCTGATGAG
AAAATTTTGATGTTTGCATTGGACCATTCTATGGGTTCTTGTTTGATAAGAAAAGAAATT
GTATTGGAGAGACCTGGCATCTCTGGAACCTCAATCCGTCCAGATGGAAAAATCGCTGCA
ACTGCTGGTTGGGATCAACGGGTTAGGATTTACAATTATCGCAAAGGAAAGCCTCTGGCT
ATTTTGAAATATCATAACGCCACGTGCAACGCCGTTTCATTCTCTGCTGATAACAAATTA
TTGGCCTCTGCATCTGAAGATACAACAGTGGCTCTCTGGGAACTTTATCCTCCTAGAACA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400028152
PEP Infomation

pacid=37464939 transcript=PGSC0003DMT400041582 locus=PGSC0003DMG400016117 ID=PGSC0003DMT400041582.v4.03 annot-version=v4.03
Sequence

MAEQGMNRRPSPDPVSVLRGHRASVADICFHPSKTILFSGSTDGELRIWDTVQHRTVSSS
WVHSAAHGVICVAASPVLGDNKVISQGRDGSVKCWEFGEGGLSRTPLLTIKTNAYHFCKL
SIAKSPSEALETDDLEINKIVDDMQRGEQGDQPTDSTISKGKELSEGPKYVAIAGEQSSV
VEIWDVNTAERIVELPHSSGSLSNQTPNQRGMCMAVQAFLPSESQGHLSVMAGYEDGSIA
WWDLRNPGAPLTAVKLHSEPVLSLCIDGECKGGLSGAADEKILMFALDHSMGSCLIRKEI
VLERPGISGTSIRPDGKIAATAGWDQRVRIYNYRKGKPLAILKYHNATCNAVSFSADNKL
LASASEDTTVALWELYPPRT*

Transcript Sequence

Transcript ID

PGSC0003DMT400041582
Transcript Infomation

pacid=37464939 locus=PGSC0003DMG400016117 ID=PGSC0003DMT400041582.v4.03 annot-version=v4.03
Sequence

ATGGCAGAACAAGGAATGAACAGAAGACCATCGCCAGACCCAGTCTCAGTGCTACGAGGT
CACCGCGCTTCGGTAGCTGACATTTGTTTTCATCCTTCTAAAACCATATTGTTTTCTGGG
TCAACTGATGGAGAATTGCGGATTTGGGACACAGTACAGCACCGTACAGTTTCTTCTTCT
TGGGTGCATAGTGCAGCACATGGGGTAATTTGTGTTGCAGCGAGTCCTGTTCTAGGGGAT
AACAAAGTTATCAGCCAGGGCAGGGATGGTAGCGTCAAATGTTGGGAGTTTGGAGAAGGA
GGTTTGTCCAGGACACCGTTACTTACAATAAAGACAAACGCTTATCATTTCTGCAAACTA
TCAATTGCAAAGTCACCAAGTGAGGCATTGGAGACTGATGATCTGGAGATAAACAAAATT
GTTGATGACATGCAAAGGGGAGAACAAGGAGATCAACCCACTGATTCCACCATATCCAAA
GGTAAGGAGCTTAGTGAAGGACCAAAATATGTTGCTATAGCAGGGGAACAATCTTCTGTG
GTTGAGATTTGGGATGTCAATACTGCAGAAAGAATTGTAGAGCTGCCTCATAGCTCTGGT
AGCCTCTCAAATCAGACTCCGAACCAAAGAGGGATGTGCATGGCAGTTCAAGCGTTCTTA
CCTTCTGAATCTCAGGGGCACCTAAGTGTTATGGCAGGGTATGAGGATGGATCCATTGCT
TGGTGGGACTTGCGTAATCCCGGAGCCCCATTGACTGCAGTCAAGCTTCATTCAGAACCA
GTTTTAAGCTTATGCATAGATGGAGAATGCAAAGGTGGTCTCTCTGGAGCTGCTGATGAG
AAAATTTTGATGTTTGCATTGGACCATTCTATGGGTTCTTGTTTGATAAGAAAAGAAATT
GTATTGGAGAGACCTGGCATCTCTGGAACCTCAATCCGTCCAGATGGAAAAATCGCTGCA
ACTGCTGGTTGGGATCAACGGGTTAGGATTTACAATTATCGCAAAGGAAAGCCTCTGGCT
ATTTTGAAATATCATAACGCCACGTGCAACGCCGTTTCATTCTCTGCTGATAACAAATTA
TTGGCCTCTGCATCTGAAGATACAACAGTGGCTCTCTGGGAACTTTATCCTCCTAGAACA
TGA